Sol Genomics Network

Unigene SGN-U200348

Unigene Basic Information

Unigene ID:	SGN-U200348
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	200348
mRNA sequence:	Length: 422 bp

>SGN-U200348 Capsicum annuum #1 (1 members)
GGTCCACCAAAAAAGGTCCCGAAAATACAAATCTCCGATCATTTCTCCGGCGAAAAACTCCGATCGTATTTCTCCGGCAAACTCCGATAA
TATTTCTCCGGCGAAATTCACTTTGATCAGAGAGGTGCACAGAACCTTGTAATATCTGAAGGGGTTAATCACCTAATGCTTTTGACATCA
AACACTTGCAATTTTGTTGTAAATTTTCCGAAAATGACGTCTGACTTCAAAGGAAAAGCTATTGCACTTATGGGTGTCAGCGGAGCTGGA
AAATCAACAATTGGTCAGATGCTTGGAAGAGCTGTTCATGGCCGCTTTCTTGATGCCCATGATTATCACTCAGAGGCTAACAAAGAGAAG
ATGAAGAATGGGATCCCTCTTTCCGAAGAACACCCTGTTCCATGGCTTGAAGCATTGCGAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS12	Placenta	4279	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E510521
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	933	Shik_kinase	20
2	26893	ATP_GTP_A_BS ABC_transporter APS_kinase Therm_gnt_kin Shik_kinase Thymidylate_kin	4
5	62445	ATP_GTP_A_BS ABC_transporter APS_kinase Therm_gnt_kin Shik_kinase Thymidylate_kin	3
1.1	102000	Isopentenyl transferase-like - Molecular Function: tRNA isopentenyltransferase activity (GO:0004811) tRNA isopentenyltransferase - Molecular Function: tRNA isopentenyltransferase activity (GO:0004811) - Molecular Function: ATP binding (GO:0005524) - Biological Process: tRNA processing (GO:0008033)	25
2	124480	Adenylylsulfate kinase - Biological Process: sulfate assimilation (GO:0000103) - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Molecular Function: transferase activity transferring phosphorus-containing groups (GO:0016772) Carbohydrate kinase thermoresistant glucokinase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: kinase activity (GO:0016301) Shikimate kinase - Molecular Function: shikimate kinase activity (GO:0004765) - Molecular Function: ATP binding (GO:0005524) - Biological Process: amino acid biosynthesis (GO:0008652)	3
5	134807	Adenylylsulfate kinase - Biological Process: sulfate assimilation (GO:0000103) - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Molecular Function: transferase activity transferring phosphorus-containing groups (GO:0016772) Carbohydrate kinase thermoresistant glucokinase - Biological Process: carbohydrate metabolism (GO:0005975) - Molecular Function: kinase activity (GO:0016301) Shikimate kinase - Molecular Function: shikimate kinase activity (GO:0004765) - Molecular Function: ATP binding (GO:0005524) - Biological Process: amino acid biosynthesis (GO:0008652)	3

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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