Sol Genomics Network

Unigene SGN-U197587

Unigene Basic Information

Unigene ID:	SGN-U197587
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	197587
mRNA sequence:	Length: 867 bp

>SGN-U197587 Capsicum annuum #1 (3 members)
ATTGATAAAAGCAAATCCATCAAGACGTTCCTGATGCAAATATTTGAGAAATGTGGGAATACTGACATTGAAGGAGTTGACTCAACTAAT
GCCTGCTATGGTGGAACTGCTGCATTGTTCAACTGTGTGAATTGGGTGGAGAGCTCTTCATGGGATGGACGCTATGGACTTGTTGTATGC
ACAGATAGTGCGGCTCTATGCTGAGGGACCTGCTAGGCCAACTGGAGGAGCAGCTGCCATTGCTATGCTAATTGGACCTGATGCCCCTAT
TGTCTTTGAAAGCAAGATCAGGGCTAGTCATATGGCTCATGTCTATGATTTTTACAAGCCCATCTTAGACAGTGAATATCCAGTAGTTGA
TGGCAAGCTTTCACAAACTTGTTATCTCATGGCCCTTGATTCTTGCTACAAGATCTTATGCAANAAATACCAGAAATTGGAAGGCAAACA
GTTTTCGATTGCTGATGCAGCTTACTTTGTGTTCCATTCACCATACAACAAGCTTGTACAGAAGAGCTTCGCTCGGTTGGCATTCAATGA
CTTTATGAGGAATGCTAGCTCCATCGATGAATATGCTAAAGCTACGCTGGCCCCATTTTCGTCTCTAAGTGGTGATGAAAGCTACCAAAG
CCGTGATCTTGAGAAGGCATCCCAACTAGTTGCTAAACCATTTTATGATGAGAAGGTGCAACCTACCACATTAATTCCAAAACAAGTTGG
CAACATGTACACTGCTTCTCTGTATGCCGCTTTTGCATCTCTCCTTCACAATAAGCACAGCGCATTGGCTGGAAAGCGGGTAATTTTGTT
TTCCTACGGCAGTGGATCAACTGCTACAATGTTCTCCGTCAGGCTTAATGAAGGTCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	1
Capsicum annuum	KS10	Hairy root	2179	1
Capsicum annuum	KS11	Early root	2168	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	855	HMG_CoA_synt_AS HMG_CoA_synth	22
2	22666	HMG_CoA_synt_AS HMG_CoA_synth	22
5	56856	HMG_CoA_synt_AS HMG_CoA_synth	21
1.1	102217	Hydroxymethylglutaryl-coenzyme A synthase C terminal Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084)	19
2	119206	Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase C terminal	19
5	129619	Hydroxymethylglutaryl-coenzyme A synthase active site - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase N-terminal Hydroxymethylglutaryl-CoA synthase - Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421) - Biological Process: acetyl-CoA metabolism (GO:0006084) Hydroxymethylglutaryl-coenzyme A synthase C terminal	18

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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