Sol Genomics Network

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Unigene SGN-U196145

Unigene Basic Information

Unigene ID:	SGN-U196145
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196145
mRNA sequence:	Length: 1177 bp

>SGN-U196145 Capsicum annuum #1 (25 members)
AAAAAGGTGATTTCATAGTGGGGAGTTTTAGCATTTATCCCCTTATTTAAGAGGATAGCTAAGGGATCTTCCAAGGAACAAGGAAAAAAT
GGCTTCCAAACATCTCTTCTTCTTTGCTAGCATCCTCTTTTTTTCAGCTGTCTCTGTATTAGCAGAGGAGAATCATGGCCTTGTAATGGA
CTATTACAAGGACACTTGCCCTCAAGCTGAAGATATCATCAGAGAACAAGTCAAGCTTCTCTACAAACGCCACAAGAACACTGCATTTTC
TTGGCTCAGAAATATCTTCCATGACTGCTTTGTTGAGTCGTGTGATGCTTCATTGTTGCTGGACTCAACGAGGAGGATGCTGTCTGAGAA
AGAGACGGACAGGAGTTTTGGTATGAGAAATTTCAGATACATTGAGACTATTAAGGAAGCTGTAGAAAGGGAGTGTCCTGGTGTTGTTTC
TTGTGCTGATATTCTTGTTTTGTCTGGTAGAGATGGCATTGTGGCTCTAGGAGGGCCACACATCCCACTCAAAACTGGAAGAAGAGATGG
AAGGAAGAGCAGAGCAGACATTCTTGAACAACACCTCCCAGATCACAATGAAAGCATGAGTGTTGTTCTTGAGAGGTTTGCCAACATTGG
AATCAACACTCCTGGAGTTGTTGCCTTGCTAGGGTCACACAGTGTGGGAAGAACACACTGTGTGAAGTTGGTACACCGTTTGTATCCAGA
AGTAGACCCTCAGTTGAACCCATCTCATGTACCTCACATGCTCAAGAAGTGCCCAGACCCAATCCCAGATCCAAAGGCTGTGCAGTATGT
GAGAAATGACAGAGGCACACCCATGATTCTAGACAACAACTACTACAGGAACATATTAGACAACAAGGGGTTAATGTTAGTTGACCACCA
ACTAGCAACTGACAAGAGGACTAAGCCCTATGTGAAGAAGATGGCAAAAAGCCAAGATTATTTCTTCAAGGAATTTTCAAGAGCCATCGC
TATTCTTTCTGAGAACAACCCTCTTACTGGGACAAAGGGTGAGATCAGAAAGCAGTGTAATCTTGCCAACAAGCTCCACTAAAGATACTG
CTTTTGCTGTGTGCTCGTACTCGTTATCACTTCTCCCCCTCCTCTTGTGTATATGTGAGGGAGGTACCGGACAGTGAATAATGTTACGAA
TAAGATG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
per	secretory peroxidase	peroxidase

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS07	Flower bud	4235	8
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	4
Capsicum annuum	KS10	Hairy root	2179	1
Capsicum annuum	KS11	Early root	2168	1
Capsicum annuum	KS12	Placenta	4279	11

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	23	Peroxidase	342
2	21984	Plant_peroxidase Peroxidase	274
5	56259	Plant_peroxidase Peroxidase	265
1.1	101394	Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase	328
2	118419	Haem peroxidase Plant peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	263
5	129511	Chlorophyll A-B binding protein - Biological Process: photosynthesis light harvesting (GO:0009765) - Cellular Component: membrane (GO:0016020)	19

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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