Sol Genomics Network

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Unigene SGN-U196099

Unigene Basic Information

Unigene ID:	SGN-U196099
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196099
mRNA sequence:	Length: 1431 bp

>SGN-U196099 Capsicum annuum #1 (29 members)
AGTCACCCTATTTTCTCAGCAGTCGTCTCTTGAAGCTTGAAGGAGGGGAAAATGTCTCACAGGAAGTTTGAGCATCCAAGACACGGTTCT
TTGGGATTTCTCCCCAGGAAGCGTGCTGCCAGACACAGGGGAAAGGTCAAGGCATTCCCAAAGGATGACCCAAGCAAGCCTTGCAAGCTC
ACTGCCTTCCTGGGGTACAAGGCTGGGATGACTCACATTGTCAGAGAAGTTGAAAAACCTGGATCAAAACTCCACAAGAAAGAGACATGT
GAAGCTGTTACCATCATTGAAACACCTCCAATGGTGATTGTTGGTGTTGTCGGCTATGTGAAGACGCCTCGTGGTCTTCGTTGCCTGAAC
ACAGTCTGGGCTCAACATCTCAGTGAAGACGTTAAGAGGAGGTTCTACAAGAACTGGTGCAAGTCCAAAAAGAAGGCTTTCCTGAAATAC
TCCAAGAAATATGAAACTGATGAAGGGAAAAAGGATATCGAGGCCCAGTTAGAGAAATTGAAGAAGTATGCTTGTGTCATCCGTGTGTTG
GCTCACACTCAGATAAGGAAGATGAAGGGTCTGAAACAGAAGAAAGCCCATTTGATGGAGATCCAGGTGAATGGTGGGACAATTGCTCAG
AAGGTTGACTTTGCATATGGTTTCTTCGAGAAGCAGGTTCCAGTTGATGCTGTTTTCCAGAAGGATGAAATGATTGATATCATTGGTGTC
ACCAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTGACACGTCTTCCTCGTAAGACCCACAGGGGTTTACGTAAGGTTGCT
TGTATTGGTGCCTGGCATCCTGCTAGAGTTTCATTCACAGTGGCCCGTGCTGGCCAAAATGGATACCATCACCGAACTGAGATGAACAAG
AAGGTTTACAAGCTTGGTAAGGCCGGACAAGAGTCCCATGCTGCCCTAACCGAGTTTGACAGGACTGAGAAGGACATAACTCCCATGGGT
GGATTTCCCCATTATGGTGTGGTGAAGGATGATTACCTGTTGATCAAGGGGTGGCTGTGTGGCGCCTAAGAAGAGGGTTGTAACCCTTCG
TCAATCCCTGGTCAACCAGACCTCTCGTGTTGCTCTTGAAGAGATTAAGCTGAAGTTCATCGACACATCCTCAAAGTTCGGACATGGTCG
CTTCCAGACCACCGAAGAGAAGCAGAAATTCTATGGACGCGTGAAGGCTTAAATGTTTCATCATTCACTTTGTTGGGTAGAACACAATTT
TTAAGCATATTTATTATTGCTGTTACTTTTTATTTTTGTGAGGTGTTTCCGAAGACAATTTGGCATTTTAATGCTTTCTGGCTGAGAACA
TTCGTAATGCTAAAGTTTTGTTTTTGCGGTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGAGACTAGTTCTCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	13
Capsicum annuum	KS10	Hairy root	2179	5
Capsicum annuum	KS11	Early root	2168	8
Capsicum annuum	KS12	Placenta	4279	2

mRNA member sequences (29)

Alignment image suppressed for unigene with 29 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	447	Ribosomal_L3	39
2	22531	Ribosomal_L3	26
5	56706	Ribosomal_L3	25
1.1	101456	20S proteasome A and B subunits - Molecular Function: threonine endopeptidase activity (GO:0004298) - Cellular Component: proteasome core complex (sensu Eukaryota) (GO:0005839) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511)	138
2	118836	Translation factor Ribosomal protein L3 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	28
5	129285	Translation factor Ribosomal protein L3 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	27

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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