Sol Genomics Network

Unigene SGN-U196084

Unigene Basic Information

Unigene ID:	SGN-U196084
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196084
mRNA sequence:	Length: 1645 bp

>SGN-U196084 Capsicum annuum #1 (34 members)
TCTGGATCTCACCGCCGCGTTACATTATTGTTTCAGCTGTTGTGCGTGCGGCCATGGCTTTGATTTTACATTCAACAAGTAACAACAAAA
ATGCCGCAAAGGGACTCATTGCGGCTGAGTACACAGGTGTGAAAGTTGAACTTGCAAAGGATTTCCAGATGGGTGTGTCAAACAAGACAC
CTGAATTTCTCGAGATGAATCCAATTGGAAAGGTTCCTGTGCTTCAAACACCTGATGGACCTGTTTTTGAGAGCAATGCTATTGCACGTT
ATGTTACCAAAACGAAGCCCGATAATCTTCTTTTTGGCTCTTCATTGATTGAATATGCTCAAATTGAACAATGGAATGATTTTTCTGCCA
CTGAAGTTGATGCAAACATTGCACGTTGGCTGTACCCACGCCTTGGCTATGCCGTATACATTCCTCCAGCTGAGGAAGCTGCGGTAGCTG
CATTAAAGAGAGCTCTTGGTGCTTTGAACACCCATCTCGCATCCAACACATACTTGGTTGGACATTCAATCACATTGGCTGACATTATTA
TGGTCTGCAACTTGAGCATTGGTTTTGGGGTGATAATGACCAAGAGCTTTACCAAAGAATTCCCACATGTAGAGAGATACTTCTGGACTG
TGGTTAATCAGCCAAATTTCTGCAAGATATTGGGTGAGGTTAAACAAGCTGAATCTATCCCAGCTCCGCCATCCAAGAAGCCCGCACCGG
CGACAGAAAAGCCCAAGGCTAAGGAGGAGCCAAAGAAAGAGGTTAAGGAAGAACCTAAGCCTGCAGAGGAGGAAGCAGCACCCAAGCCTA
AGCCAAAGAATCCTCTTGATCTCTTGCCTCCAAGTCCGATGATTCTGGATGATTGGAAGAGGCTTTACTCCAACACCAAGACCAACTTCC
GTGAGGTTGCTGTTAAAGGTTTCTGGGACATGTATGACCCTGAAGGATATTCTCTCTGGTTTTGCGATTACAAGTACAATGATGAGAACA
CAGTTTCGTTTGTAACCTTGAACAAGGTTGGTGGTTTTCTGCAAAGGATGGATCTGGTGCGCAAGTATGCTTTTGGTAAGATGTTGATTG
TTGGTTCTGAGCCCCCATTCAAGGTGCAAGGCTTGTGGCTTTTCCGTGGAAAGGAAATTCCCAAGTTCGTTATGGATGAAGTCTACGACA
TGGAGCTCTATGAATGGAAGCAAGTAGACATCAACGATGAAGCCCAGAAGGAACGTGTTAGCCAAATGATTGAAGACCATGAGCCTTTTG
AGGGACAGGCTCTGTTGGATGCAAAGTGCTTCAAGTAAACTACCACTGTATTGCGATCAGCAATGTTACCCTTTTCCTGAGATTGTAGTT
TACTCTGGTTTTGTCCTCCCAAATTTACTTAGATTCTTGTTTTAAACAATATCTTGGCCTTAGAGAAACTGTTGTCTTTGTCGTACGTTT
CCAAGTTGTTGATTTCACATAGTTCATGGGACAGACATCTGTGGTTGAATTATGTTATCCTTTTCAAGTAAAGCAGTTTTGGTAGTTCAT
TCCGGTGAATCATCTGTTCTCGAAGTTGTCGCTCTCTAACTTAAAATGAAGGCTGATCAACTTATCGTCTGAATTTTGTACCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	5
Capsicum annuum	KS07	Flower bud	4235	15
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	6
Capsicum annuum	KS10	Hairy root	2179	3
Capsicum annuum	KS11	Early root	2168	4
Capsicum annuum	KS12	Placenta	4279	1

mRNA member sequences (34)

Alignment image suppressed for unigene with 34 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	29	Mal_ac_isom	300
2	22504	EF1_G GST_Cterm Mal_ac_isom GST_Nterm	27
5	57022	EF1_G GST_Cterm Mal_ac_isom GST_Nterm	18
1.1	101396	Thioredoxin-like fold Glutathione S-transferase C-terminal-like	299
2	119155	Elongation factor 1 gamma chain - Molecular Function: translation elongation factor activity (GO:0003746) - Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853) - Biological Process: translational elongation (GO:0006414) Thioredoxin fold Glutathione S-transferase C-terminal Glutathione S-transferase C-terminal-like Glutathione S-transferase N-terminal Thioredoxin-like fold	19
5	129505	Elongation factor 1 gamma chain - Molecular Function: translation elongation factor activity (GO:0003746) - Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853) - Biological Process: translational elongation (GO:0006414) Thioredoxin fold Glutathione S-transferase C-terminal Glutathione S-transferase C-terminal-like Glutathione S-transferase N-terminal Thioredoxin-like fold	19

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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