Sol Genomics Network

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Unigene SGN-U196028

Unigene Basic Information

Unigene ID:	SGN-U196028
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196028
mRNA sequence:	Length: 1009 bp

>SGN-U196028 Capsicum annuum #1 (31 members)
CCAGTGCTTGTGCTCTGCTCGTGCGTCTTACGGTTTAACGTTTTGCTTAACTCCTCGATATCTTCTTCTTCAGAGCAATTACTATGGGCA
AGTGCTATCCCACTGTGAGCGAGGAGTACCTCAAGGCTGTTGACAAATGTAAAAGGAAACTCAGAGGACTCATTGCTGAGAAGAATTGTG
CTCCTCTTATGCTCCGTCTTGCATGGCACTCTGCTGGTACCTATGATGTGTGCTCCAAAACTGGAGGTCCTTTTGGTACCATGAGGTTCA
AAACTGAGCAGTCTCACGGAGCAAACAATGGTATTGACATTGCTCTCAGGCTCTTGGAGCCCATTAGGGAGCAGTTTCCCATCCTCTCCT
ATGCTGATTTCTATCAATTGGCTGGTGTTGTTGCTGTTGAGGTGACTGGAGGACCTGATGTTCCCTTTCACCCCGGCAGAGAGGACAAGC
CAGAGCCACCTGTTGAAGGTCGCTTGCCTGATGCAACCAAGGGCTCTGACCACTTGAGGGACGTGTTCGTGAAACAAATGGGTCTTTCTG
ATCAGGATATTGTTGCACTCTCTGGTGGCCATACCTTGGGAAGATGCCACAAGGAGCGTTCTGGTTTTGAGGGACCTTGGACCGCCAATC
CCCTCATTTTTGACAACTCATACTTCAAGGAACTATTGGGTGGGGAAAAAGAAGGTCTTTTACAGTTGCCCTCAGACAAGGCTCTCCTCT
CTGATCCTGCTTTCCGTCCCCTTGTTGAGAAATATGCTGCAGATGAAGATGCCTTCTTTGCTGACTATGCTGAGGCTCACTTGAAGCTCT
CTGAATTGGGATTCGCTGAAGCTTAAGATGCTGATTGGTAGAGTTGGGAGTGGCGGCATGTTTTTGTTTATGTTTCACTTCTGAAAAGCT
TGCTGGGATTATTTATTTTTGTCTTCTGTTGCTACTCCTTATATCATGATTTGAATTTGGCAGCTTTATTAGACGATGCTATTGTCACTC
TCTTCCAGCTTAAGAAGTT

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
X81376	cytosolic ascorbate peroxidase	cytosolic ascorbate peroxidase
apx1	cytosolic ascorbate peroxidase DQ002888	ascorbate peroxidase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1
Capsicum annuum	KS07	Flower bud	4235	3
Capsicum annuum	KS08	Anther	2304	1
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	12
Capsicum annuum	KS10	Hairy root	2179	4
Capsicum annuum	KS11	Early root	2168	5
Capsicum annuum	KS12	Placenta	4279	5

mRNA member sequences (31)

Alignment image suppressed for unigene with 31 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	23	Peroxidase	342
2	22141	Asc_perxdse	55
5	56478	Asc_perxdse	38
1.1	101394	Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase	328
2	118594	Plant ascorbate peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	46
5	129165	Plant ascorbate peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	34

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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