Sol Genomics Network

Unigene SGN-U585413

Unigene Basic Information

Unigene ID:	SGN-U585413
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1298 bp

>SGN-U585413 Tomato 200607 #2 (74 members)
ACAGGCACAGTAGATTTCATTTCTTGTCTTTGTCAAATCCTAGAATCAACCTGATAATATGGCGGGGGAAAAGACTGGAATTGCCAAGGA
TGTAACTGAATTGATAGGTAACACTCCTTTGGTATACCTGAATAATGTTGTGGATGGGTGTGTTGCACGTGTTGCTGCCAAGCTGGAAAG
CATGGAGCCATGCTCTAGTGTTAAGGATAGGATTGGTTATAGTATGATTACAGATGCTGAGGAGAAGGGCTTAATCAAACCTGGCGAGAG
TGTCCTCATCGAACCTACAAGTGGAAACACCGGTGTAGGATTGGCATTCATGGCTGCTGCTAAAGGCTACAAACTCATCATTACGATGCC
TTCTTCAATGAGTCTTGAGAGAAGAATTATTCTGCGTGCTTTCGGTGCTGAGTTGGTGCTTACTGACCCAGCAAAAGGGATGAAAGGTGC
AATTTCGAAGGCCGAAGAGATAAGGGGCAAAACACCTAACTCCTATATTCTTCAGCAATTTGAAAACCCTGCTAACCCAAAGATACACTA
TGAAACCACTGGTCCTGAGATCTGGAAAGGCTCAAACGGGAAAGTGGATGCACTAGTCTCTGGAATTGGAACAGGAGGCACAATAACAGG
TTCAGGCAAGTATTTGAGAGAGCAGAACCCCAACATCAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCTATCCTTTCTGGTGGAAAGCC
TGGTCCACATAAGATTCAGGGGATTGGTGCTGGTTTCGTTCCTGGTGTTTTGGAAGTTAACCTTATTGACGATGTAGTTCAGGTTTCAAG
TGATGAATCCATAGAAATGGCTAAGCTTCTGGCATTGAAGGAAGGATTGCTAGTGGGAATATCATCTGGTGCTGCTGCTGCTGCGGCAAT
TAAAGTTGCTAAGCGTCCTGAAAATGCTGGGAAGCTCATTGTTGTTGTTTTCCCAAGCTTCGGGGAGCGATATCTTTCCTCTGTGCTCTT
CGAAACTGTCAGACGAGAAGCAGAGAACATGACTGTGGAGCCTTGAACTTTTTGTCCTTCGATTACTACATCATCGTCGCGAATAGGGCT
TCTGATGAAGCAGAATGTTCTTGTCTAAACCTTCCCCTTTCCATTTTGCTGAAACTGCTAGAAAATAAGGCCATCTCTTTCCTTTATTGG
CTATGTTCTTTAAAGTAAAAAAAAAAACCGTTCAAGTATCTTTTAGTGCTTTTGTAATTCTACTGTTTCTACAACATTTGAAATTTATAG
AGCTGTTGCTTCTTGTTCATGAGAAAAAAACTGAAAAC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc09g082060	Solyc09g082060

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	32
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (74)

Alignment image suppressed for unigene with 74 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (11)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315784	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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