Sol Genomics Network

Unigene SGN-U583819

Unigene Basic Information

Unigene ID:	SGN-U583819
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1272 bp

>SGN-U583819 Tomato 200607 #2 (57 members)
GCNTNACGGCCGGGGGANTATATGAGAGAGTAATATCTCTCTGTTAAAAGAAGTGGAAAAAAAAAATCAATCTTTGGAGTCTCTTAGCCA
AAAACCCCTAATAGCAGAAAAAGAGTGGAAGACGAATGGAGGGAAGTTGTCTAACATTTAGCACAGCTTTGGCACCAGCCAGACCTTCAA
CATGCCTTCATTACAATTCTACTTTTGTTAAACAGTTTCAGACAAATACAATCACACCAAGAAGAGGATTATCAGTAAAAGCGTCCACCC
ACAAGCCGACTTTATCGACGAACTGGGATGTTTCCAGTTACTCAAAAGCCCCTGCTTGGATGCCCAGATTTGAAGAACTTGATACCACCA
ATATGCTTCTTCGTCAAAGGATTATCTTCTTGGGTTCTCAGGTAGATGATATTACTGCGGATTTTATTATAAGCCAGCTATTAATTCTTG
ATGCAGAAGATGATAAAAAGGACATCAGATTGATCATTAATTCACCTGGTGGTTCAGTAACTGCTGGAATGGGAATATATGATGCCATGA
AAATGTGTAAGGCTGATGTTTCTACTATCTGCATGGGATTGGCTGCATCCATGGGTGCGTTTCTCCTGGCTTCTGGCAGCAAGGGAAAGA
GGTACTGCATGCCAAACGCAAAAGTGATGATCCATCAACCACTTGGAACTTCTGGTGGTAAAGCAACAGAGATGGGTATACGGATCAGAG
AAATGGGATACCACAAGATGAAGCTTAATAAAATACTATCAAGAGTTACAGGCCAGCCTTTAGAAAAGATTGAAGTGGATACTGATCGTG
ATAATTTTATGAATGCTTGGGAGTCTAAGGAATACGGGTTGGTTGATGCTGTTATAGATGACGGCAAACCAGGATTGGTAGCACCCATTA
CCGAGGATGCACCTCCACCAAAAACACGAGTTTGGTATAAGTGGAAGGCCGAAGGCACCAGGAAGAGAAAGAACAATTGGCCTTCTGAAG
AAAAGTTATTCCAAAATGATGAGCAGAGCAATGAACAGAAAGATGAAGCTCTAAGTCCTCTATAATGTATTGGGATACATGTGGCCTTGA
ACAGATAGTCCCTACTGAATATGAGATGTCGTCTTGAGGGTTCATTGTAAGATTATTAACAGGAATTTTTATATTATGGTCGACGTCAGT
TGAGCCTTCTGTTGTATCAATGTCTCCTCTTAGTATTTGAACTGGTCCTTTATCAACAAAGAGAACATTTGAAATGGTATTTTTGTTGGG
GATTTATATAGC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g091280	Solyc02g091280

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	6
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	13
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum lycopersicum	cTSC	seed	2256	4

mRNA member sequences (57)

Alignment image suppressed for unigene with 57 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315248	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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