Sol Genomics Network

Unigene SGN-U583504

Unigene Basic Information

Unigene ID:	SGN-U583504
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1531 bp

>SGN-U583504 Tomato 200607 #2 (58 members)
CACAAGTGGCTTCCTTGTTCTAACCAAGAAGGCCCTAAGAAACCTCCATTGAAATTAAAATTTTCCACCCTTTATAATCTCCATTTTCAC
TCTTCATTTTCCACTCAATTCAATTACCAACAATATTTTTCAAGAAAAAAAATGGATTCTTCTTCACTAGAAATGATAAGACAACATCTT
CTTGATGATGTTGTTTTCATGGAAACTTGTTCTTCTTCTTCTTCTTCTTCATTAGAAACAACAAGTAGTACACTTTATTCTCAAACCTCA
TCGAATTCGGAATCTTTAGAATCATTAACCTCTGAGATCAAACTTGAAAGCAATTTCTCTGTTTATCCTGATTTCATCAATACACCTCAA
AGTTCAAATCTTGAATCTGTCTCTCGTTTTTTCGATAACTCAACTATTGAATTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAATGAT
CGAAAACCTTCGTTAAACATTTCGATTCCTTCTGTTAAGAAAACAGAGGAACCAAAAACAGGGGAAGTAAAAACAGGGGAACCAAAAACA
GAGGAGCCAAAAACAGGGGAAGTGAAAACAGAGTACTCTGTTAAGGAGAAAATGGTAGAAAATTCGGAGAAAAAGCGATACAGAGGAGTG
AGACAAAGGCCATGGGGGAAATTTGCAGCGGAGATTCGTGACCCAACTAGAAAGGGGACACGAGTTTGGTTAGGAACATTCGATACTGCA
ATGGATGCAGCCATGGCATATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCTTGAATTTTCCACTTGAGGTAAGCAATTTC
AAGCAAGAAAATCATGAGATTGAGAAAAATGTTGTGAATTTGAATTCGAATACGAATTCTTGTGGGAAAAGGGTGAGAGGGGAAATGGAG
AATGATGACGGAATTGTAATGAAGAAAGAGGTGAAAAGAGAACAAATGGTGGCAACTCCATTAACACCTTCAAATTGGTCTTCAATTTGG
GATTGTGGAAATGGAAAAGGTATTTTTGAAGTGCCACCTTTGTCACCATTATCACCACATTCAAATTTTGGTTATTCTCAACTTTTGGTA
TCATAGTGAAATCCCCAAAAGAATCCACTTGAGTATGTTATGGAATATTATATAGCGGAACTATACTGCCATCACGATCCACTGAGATTT
AGTCTTTTGTTATGTTGAGAGTTTCTAAAATGTTATGGCAGAACTATATTACTGTCACAATCCACTGAGATTTAGACCTTTATTGTGTCG
ATCCACTGAAATTTAGTCGAGAGTTTCTAAAATGAAATATTTTGAACAAGTATGAAGTGATTTCAAGTTGTAATAAGGAATTTACCTCTT
GGAAATTTTGGATAAAAATAGCACATGTACAAATGAAGAAACATGGAATGATGGAGGGAGAATGGAAGTGTTTTGAATCATGGATATTTT
TAATTATTTTTTGATTTCATTGATTAAGCTTTTTTTTTTCCATGTAAATATGAATTTTAATTTGGTTGGTTTATTTTGAAGGAAAAGGTT
C

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ddtfr10a	ripening regulated protein DDTFR10/A

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	2
Solanum lycopersicum	Sl_RootSSH02	root	152	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	12
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	17
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (58)

Alignment image suppressed for unigene with 58 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (1)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315595	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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