Sol Genomics Network

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Unigene SGN-U583104

Unigene Basic Information

Unigene ID:	SGN-U583104
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2479 bp

>SGN-U583104 Tomato 200607 #2 (43 members)
GTAATAACTCTATCCCCTTCTACAAGCATCTGTTTCTCCCTATTTTTTCGCCTCCTTCCCTAAAACCCTCCAAAACCCTAACGCACAACA
GCTCCTCAAAAATTACGAATTAGTTTTCTTCCTTTGTTTCTCCGATGGCGACCGCCGCCTTGCTCAGATCTCTCCGTCGACGTGAATTCG
CCACTTCTTCTATCTCCGCTTATAGAACTCTTGCTTCCAACACCAAGCCTTCATGGTGCCCATCACTGGTTGGTGCTAAATGGGCTGGTC
TGGCTAGACCATTTAGCTCCAAACCTGCTGGAAACGAAATTATTGGGATAGACTTGGGAACCACCAACTCTTGTGTTGCAGTGATGGAGG
GGAAGAATCCCAAGGTCATTGAGAATTCTGAAGGAGCCAGAACAACTCCTTCTGTGGTTGCATTTAATCAGAAGGGAGAACTTCTTGTTG
GTACTCCAGCCAAACGTCAGGCAGTTACCAATCCTACAAACACTCTTTCTGGGACCAAGCGTCTAATTGGCAGACGCTTTGATGATCCTC
AAACACAAAAGGAGATGAAAATGGTCCCTTACAAGATTGTGAAAGGCTCAAATGGAGATGCGTGGGTTGAAGCAAATGGCCAGCAATATT
CTCCAAGCCAAATTGGAGCATTTATTCTAACAAAGATGAAGGAAACCGCAGAGGCCTACCTTGGGAAATCTATTAATAAAGCTGTGATCA
CTGTTCCAGCTTATTTCAATGACGCTCAGAGGCAGGCAACAAAGGACGCTGGGAGAATTGCAGGTCTTGATGTGCAAAGGATTATTAATG
AACCTACTGCAGCTGCGCTGTCTTATGGTATGAATAGCAAAGAAGGCCTTGTCGCTGTTTTTGATCTTGGCGGTGGAACATTTGATGTTT
CAATCCTGGAGATATCAAATGGTGTTTTTGAGGTCAAGGCAACTAATGGTGACACCTTTTTAGGAGGAGAGGATTTTGACAATGCATTGT
TAGAATTTTTAGTGAGCGAGTTTAAGAGGACTGAGGGAATTGACCTATCAAAAGACAAGCTTGCCCTGCAAAGACTCCGAGAGGCAGCCG
AGAAAGCTAAGATAGAGCTTTCATCAACATCTCAAACTGATATTAACTTGCCGTTCATCACAGCCGATGCATCAGGGGCTAAACATCTGA
ATATCACACTGACAAGATCAAAATTTGAGACATTGGTGAACAACTTAATCGAGAGGACAAGGAATCCTTGCAAGAATTGTTTGAAGGATG
CTGGAGTATCTTTAAAAGATGTGGATGAGGTCCTCCTAGTTGGAGGTATGACGCGTGTTCCTAAGGTGCAGGAAATAGTTTCTGAGATAT
TTGGTAAAAGCCCCAGCAAAGGTGTTAATCCAGATGAGGCAGTTGCCATGGGAGCTGCACTTCAAGGTGGTATTCTCCGTGGTGATGTTA
AAGAGTTGCTTCTTTTGGATGTAACTCCGCTATCTCTTGGTATTGAGACATTGGGAGGTATCTTCACTAGATTAATAAACAGGAATACTA
CCATTCCCACAAAGAAAAGCCAGGTGTTTTCTACTGCTGCGGACAACCAAACGCAAGTTGGCATCAAGGTATTACAAGGTGAACGTGAAA
TAGCATCTGATAATAAGCTTCTGGGTGAATTTGAGCTTGTTGGTATTCCTCCAGCCCCAAGGGGTTTGCCTCAGATTGAGGTCACCTTTG
ACATAGACGCAAATGGTATGGTCACTGTATCTGCCAAAGACAAGGCTACTAGCAAAGAGCAGCAGATTACCATTCGGTCATCTGGTGGTC
TATCAGAAGATGAGATTGACAAGATGGTCAGGGAAGCAGAAATGCATGCCCAGAAGGATCAAGAACGCAAGGCACTTATTGATATCAGGA
ATAGTGCAGACACTACCATATATAGTATCGAGAAGAGCTTGAGTGAGTACAAGGATAAGGTCCCCAAGGAAGTGGTTACAGAGATCGAGA
CAGCTATTTCTGATTTGAGAGCAGCAATGGGGACTGAGAACATTGATGATATCAAGGCGAAACTTGATGCGGCAAACAAAGCTGTCTCAA
AGATTGGAGAGCACATGGCTGGTGGCAGTTCTGGTGGTGCATCTGGAGGTGGTGGTGCACAAGGAGGAGATCAGCCACCAGAGGCAGAAT
ACGAGGAAGTAAAGAAATAGATATTTATTCTAGGCATAATTGAATAGTGCATGAAAAAGACAAGAGAGAGATGTTATAGATCTACTTTCC
TTCTAAAAATGAGTTTATTTTTTCCATCACTTTTCCCCTTCCCCGGAAGTATTTTGTGCTCAAGCTCAAAACTGGTTGTATCAATGGTCT
TGAGTTGTGAATTTCTTAGCGTCTAGTCTTCTATGTTCAGTAGAACAGGTGAGTATGATTTTTGACAGCCCTTCAATGTTAAAATTGACA
GAAACAATGCTTTGTTTCCACAATAATATGATACTGTCCTTTTAATTTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc01g106210	Solyc01g106210

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEE	seeds and maturing carpels 5 days post-anthesis to fruit over-ripe stage	547	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	4
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (43)

Alignment image suppressed for unigene with 43 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312976	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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