Sol Genomics Network

Unigene SGN-U580893

Unigene Basic Information

Unigene ID:	SGN-U580893
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1606 bp

>SGN-U580893 Tomato 200607 #2 (101 members)
AGGACACATCATTTCTCGGTTCTCTCAAATTCTTCTTCCTTTCTACAGATCTAGAGCTTTCTTTTCCATTCTCAGCTAGATATGGAGACT
TTCTTGTTCACCTCAGAGTCAGTTAACGAAGGACATCCCGACAAGCTTTGTGACCAGGTTTCAGATGCCATTCTTGATGCTTGCCTAGAA
CAAGACCCAGAGAGCAAGGTTGCATGTGAAACCTGCACAAAGACAAACATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCCAAGGTG
GACTATGAGAAGATAGTACGTGACACCTGCAGAGGCATTGGCTTCACTTCACCTGATGTTGGTCTTGATGCTGACCACTGCAAAGTCCTT
GTCAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGAGTCCATGGTCATCTTACCAAGAAACCAGAAGACATTGGAGCTGGTGACCAA
GGTCACATGTTTGGCTATGCCACCGATGAAACACCTGAACTCATGCCACTTACTCATGTTTTGGCTACAAAGCTTGGTGCCAAGCTTACT
GAAGTGAGGAAGAACAAGACTTGCCCATGGCTCAGACCTGATGGCAAGACACAAGTTACAGTCGAGTACAAGAACGACAATGGTGCCATG
GTCCCTATTAGAGTTCACACCGTTCTCATCTCAACTCAACATGATGAAACCGTCACAAATGATCAGATTGCCAAGGAGTTGAAAGAGCAT
GTGATCAAGCCCGTGATCCCAGCTCAGTACCTTGATGACAAGACCATCTTCCACCTCAACCCATCAGGTCGTTTTGTGATTGGTGGTCCA
CATGGTGACGCTGGACTCACTGGCAGGAAAATCATCATCGACACTTATGGAGGTTGGGGCGCTCACGGTGGAGGTGCCTTCTCAGGAAAA
GACCCTACCAAGGTGGACAGGAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAGTGTGGTCGCTGCAGGACTTGCTCGCCGCTGCATT
GTCCAGGTTTCTTATGCTATTGGTGTCGCAGAACCACTCTCTGTGTTTGTTGACACGTACAAAACCGGAACCATTCCAGACAAGGATATT
TTGGTTCTGATCAAGGAGAACTTCGACTTCAGGCCTGGAATGATGTCCATTAACCTCGACTTGAAGAGAGGAGGCAACTTCAGGTACCAG
AAGACTGCTGCTTATGGTCACTTCGGCCGTGATGACGCTGACTTCACCTGGGAGACTGTTAAGGCCCTCAAGCCTAAAGCTTGAGTGCAA
GTTCCCACTCACAACTTTGCGTACCAATATTCTTGTGCCTATTATTCTTATTGCGGACCAAATAAAGAAGCTTCATTGATTGAGTAAATT
GATATCCTATTTTTACATTTAAGGCGCTATCGAGTGGAGGGAGACCAAAGCAAGTGTCTACATACTTTCATGGATTCTAAGAGCTCCAAG
CAATTGATACTGTTGATTTTTCTTTTTTTTTTTTTTGCAGTACTTAATTTCAATGTAACCTGCGTTGTTCATTTCTGATATCCCCTCATA
CGAACAAGTTCTTTTGTCTTTGTGTTCATTTATCTAATGGGAAATGCAGCATGTTGTTGAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (33)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	7
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LE08	Fruit 8 days post anthesis	339	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	4
Solanum lycopersicum	LePS	root 5 weeks old plants	823	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	Sl_RootSSH03	root	149	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	9
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	6
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	8
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	7
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	6
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	6
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (101)

Alignment image suppressed for unigene with 101 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (3)

Unigene	Build
SGN-U312580	Tomato 200607 #1
SGN-U333706	Tomato 200607 #1
SGN-U333707	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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