Sol Genomics Network

Unigene SGN-U579112

Unigene Basic Information

Unigene ID:	SGN-U579112
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2443 bp

>SGN-U579112 Tomato 200607 #2 (151 members)
CACNTAAACAAATTATTGGGTTACTATACACCTTATCGCAGCACTAAAGAGAACAAAAACGCACCAGAACAAAATTTATTTCAACAAAGC
TGGAAAGAAAACACAGTATTATCACTCAAAAACACACATGAAGCTCTCATTTGACCTTTCCATAATGAATTCACAACAACCCAAACTATT
CTGAAGCAGACCTTATAGGTTTACCCACAACAAAACGCCTACCGTGATTCCCAATCTTCTTTTTACAGCCATCAAGAGAAACAGATAACT
CATAAGGAGGTGCATCAGAAGCCAACCATTGATCCACATAGAATATGCTCTGACTACACTGCATATGAGGACCAGTGAAAGTTGTCTCAA
CATAATCCAAGAACCATCCATGGTGATCTCCAGATCCATCAGAAGTAACATTAAGTCTGCAAATTGGTGTGCTAATACATTTGCCTCTAC
CAGTGAAGATATCCACATTACCTCTTTCGTAGTAATCGTAATTTGGACCCATTAAACCCCACTTTTCAAGATCTGGAATCCATACTGATT
TTCCAGAAGCATCGCCTAGTGTAACGCTGATTTTGGAGTCAGTTCCACCCTTTATGATTGAACCAGTTCGAACATACAGAGTATACACAC
ACTCTTCAGATGAACCAGCTGCAGCAATATGAGCTGTAAGGAAGAAAGTGAAACGTATCGTTTTGCCTCTCCGCCGAAACACAACACAGT
TGGTGAAGGGTGAAACAAGTTTCAACTGTTGTGTGGCCATGGCTCTGATTTTGCATTCAACAGACAACAACAAAAATGCCTCAAAGGCAC
TCATTGCAGCTGAGTACACAGGTGTTAAGGTTGATCTTGCAAAGGACTTCCAGATGGGTGTATCCAACAAGACACCTGAGTTTCTTGAGA
TGAATCCCATTGGAAAGGTTCCTGTGCTTCAAACACCTGATGGACCTGTTTTTGAGAGCAATGCCATTGCGCGTTATGTTACCAAAACAA
AGCCCAACAATCCTCTTTTTGGCTCTTCATTGATTGAATATGCTCAAATTGAACAATGGAATGATTTTTCTGCCACTGAAATTGATGCAA
ACATTGCACGATGGCTGTACCCACGCCTTGGCTATGCTGTTTACATCTCTCAAGCTGAGGAAGGTGCAGTAGCTGCATTAAAGAGAGCGC
TTGGTGCTTTGAACACCCATCTTGCATCTAACACATACTTGGTTGGACATTTTATCACACTGGCTGACATCATCATGGTCTGTAACTTGA
GCATTGGTTTTAGGATGATATTGACCAAGAGCTTTACCAAGGAATTTCCACATGTAGAGAGATATTTCTGGACTGTTGTTAATCAGCCTA
ATTTCGTCAAGATATTGGGTGAGGTGAAACAAGCTGAATCTATCCCTGCTGTGCAATCCAAGCCTGCACAACCTGAAAAACTCAAGGCTA
AGGAGGAGCCAAAGAAGGAGGTTAAGAAGGAAGAACCAAGTCCTGTAGAGGAGGAAGCAGCACCCAAGCCTAAGGCAAAGAATCCTCTTG
ATTTATTGCCTCCAAGTAAGATGATTCTGGATGATTGGAAGAGGCTTTACTCCAACACCAAGACTAACTTCCGTGAGGTTGCTGTTAAAG
GTTTCTGGGACATGTATGACCCCGAAGGATATTCTCTCTGGTTTTGTGATTACAAGTACAATGATGAGAACACAGTTTCGTTTGTAACCT
TGAACAAGGTTGGTGGTTTTCTGCAGAGGATGGAGCTGGTACGCAAGTATGCTTTTGGTAAGATGTTGATTGTTGGTTCTGAGGCCCCAT
TCAAGGTGCAGGGCTTGTGGCTTTTCCGTGGGAAGGAAATTCCCAAGTTTGTTATGGAGGAAGTGTATGACATGGAACTCTATGAATGGA
AGGAAGTAGACATCAATGATGAGGCCCAGAAGGAGCGAGTTAGCCAAATGATTGAAGATCACGAGCCTTTTGAGGGACAGGCTTTGTTGG
ACGCCAAGTGCTTCAAGTAAAAAACAACACTGTATTGGAGATTGAGCAATGTTACCTTTTGACTGAGGCTGTAGTTTACTCTGGTTTTGT
CCTCCCAAATTTACTTAGATTCTTGTTTTAAACACTATCTTGTCTTAAGAGAAACTATTATCTTTGCAGTGTTTTTTTTCTTCAAGTTAT
TGATTTCATATGGTTCATGGGATATCTGTGGTTGAAATTTGTTATCCTTTTCAACTAAAGCAGTTTTGACAGTCAGGTGAAATCACCCTT
TATAGCATTTGTAAGTTCTATGTAGGCTGATAAGCTTTTGCTTGATTTTTGTTGAAGTAGTATCTTGTTTGCTATTTGAAGATTTACCAT
AACAAGTACTGCTGAAGTTTTATAAAATGTTGAGCAGTCTCTTGGTCTAATGAAAAGTTGACAGGATGTGTTTGGGGTGCAGGTCCAAAG
TGCACAAAATATT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (39)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	5
Solanum lycopersicum	LA	Leaf Mature leaves	6589	5
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	16
Solanum lycopersicum	LeMiToLf01	leaf	30679	14
Solanum lycopersicum	LePS	root 5 weeks old plants	823	3
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	4
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEE	seeds and maturing carpels 5 days post-anthesis to fruit over-ripe stage	547	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	11
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	5
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	8
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	11
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	vSlycmRNA		8362	4
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	4
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (151)

Alignment image suppressed for unigene with 151 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U314655	Tomato 200607 #1
SGN-U314658	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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