Sol Genomics Network

Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Unigene SGN-U569290

Unigene Basic Information

Unigene ID:	SGN-U569290
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1177 bp

>SGN-U569290 Tomato 200607 #2 (52 members)
TTACNGCCGGGGNNCACTACAAAAATTGCTTTTCTCCGGTGAATTCCTTACGATCTCTTTCTCCGGCGATATCTAGATCTTATTGCAGCT
TAAGGTTGTAAATGATGAAGATCGATTTTAGTGGACTTGAACCAAGTGCCCCACTTCGAGGGGAATCTTCTGAGCTGTTTGATGGAATTT
CAAATTCTCCATCATTCCATCTTCCTAATACTGCTAATTTTGATGGTTTTCAAAAAGAAGCAATCCAAATGGTGAAGCCCGCAAAGGGAA
CCACAACCCTTGCTTTCATTTTTAAAGGAGGTGTCATGGTTGCTGCTGATTCTCGGGCTAGCATGGGAGGATATATATCATCTCAATCTG
TGAAGAAAATCATTGAAATTAATCCCTATATGCTTGGCACAATGGCTGGTGGGGCTGCTGACTGCCAATTCTGGCATAGAAACCTGGGAA
TCAAGTGCCGTCTTCATGAACTGGCAAACAAAAGGAGAATTTCAGTTACTGGAGCTTCAAAGCTGTTGGCAAACATTTTATATTCGTACC
GTGGAATGGGTTTGTCTGTTGGAACTATGATTGCTGGTTGGGATGAGAAGGGTCCAGGACTATACTATGTGGATAGTGAGGGAGGACGGC
TTAAAGGAAACAGATTCTCTGTTGGATCTGGTTCTCCTTATGCTTATGGTGTTTTGGATAATGGGTACCGATATGATCTATCTGTGGAAG
AAGCAGCCGAGTTGGCTAGACGAGCAATTTATCATGCTACATTCCGTGATGGAGCTAGTGGAGGTGTTGCTAGTGTTTATCATGTCGGAC
CAAATGGATGGAAGAAGCTATCAGGTGACGATGTTGGAGAACTCCACTACCACTACTATCCCGTCGAAGTGGCAGCTGTGGAGCAGGAAA
TGGCTGAAGTTCCAGTTGCCTGAGGAAAAACAAAACCAAGATCAAGATCAAAACATGTGCTCATCTTTGCAAGTTAAAGTGACTGTTTAA
TTTTCTTCTGAGACTGTATTTTGTGGTCTTGCAATCTGTAAAACCGTAAAAACATATTTAAACCAAACCAATAGATGCAAGGCTATGTTT
CATTTCAACATTCATCACTTAATTATGTATTAGTTATATGTACACTTAAAGGTTCAACTGTTAAGCTTGAATTATCTGGCAAAAAAAAAA
AAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (26)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	7
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	4

mRNA member sequences (52)

Alignment image suppressed for unigene with 52 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315200	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: