Sol Genomics Network

Unigene SGN-U568685

Unigene Basic Information

Unigene ID:	SGN-U568685
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2345 bp

>SGN-U568685 Tomato 200607 #2 (36 members)
GTCACATACAATGCCCTGTATACAAAAAGAAGTAGTAGTAAAATATCAACCAACAATGACCATCACAGCACTAGTTTAGTATACAAAGGA
ACCCCCTTTACCTTCCAAAAGCCAAATAAACCAAAAGGGACTTTGTTTTTTTCAACTATGGCTTCTTGATCTCTCTATCTCCTTGTTTAT
ATCGCTTCTTAATTTGCTTTTACAGCTCTTTTTTTTTAATTGGGTGTGTGGAATTAATGGCTTCTTCTTCTCTATCTAGCATCTATTCAC
CTTCTTCATCTTTCAAATCTGAAGTGAAATCCATTCACAAAATCACTTCTTCCCAATTGGGTTCAATTTATTTGCCCAATAAATCAAGAT
TCCATGTTCACGCGGTGGCGCGTGAGGTTTCAGCGAGCTTGTCGGCCGGAAACAATGACGTGGTACATAAGTTGAAGAAGGAGAATGTTG
GGTTGGAGAAAAACCCGAATGCTCTATGGAAGAGATATGTTGAGTGGCTTTATCAGCACAAGGAGTTGGGTTTGTATTTGGATATCAGTC
GGGTTGGATTCAGTGATGGGTTTCTTCAGGAAATGGAGCCTCGTTTGCAGAAGGCATTTAAGGATATGGTGGATTTGGAGAAGGGGGCTA
TTGCAAACCCTGATGAGGGTAGAATGGTGGGTCACTATTGGTTGAGAAGTCCTCATCTTGCTCCCAACTCATTTCTCAGGTTGCAGATTG
AGAATACTCTTGAAGCTGTGTGTGAGTTTGCAAATGATGTCGTCAGTGGTAAGGTTAAGACTCCTTCTGGAGGCCGATTTACGCAAATTC
TCTCTGTTGGAATTGGTGGTTCAGCTCTTGGACCACAATTTGTGGCTGAGGCATTGGCACCTGACAACCCTCCTCTGAAGATAAGATTTA
TCGACAATACAGATCCAGCAGGCATTGATCATCAAATTGCACAACTTGGCCCTGAGCTGGCTTCAACACTTGTTATTGTTATTTCAAAGA
GTGGAGGCACTCCAGAAACCCGAAATGGCTTGCTAGAAGTTCAGAAGGCCTTCCGTGAAGCTGGCCTGATATTCGCAAAACAGGGTGTTG
CCATTACACAAGAAAACTCATTGCTTGACAACACTGCTAGAATTGAGGGTTGGTTGGCCAGATTCCCTATGTTTGATTGGGTGGGCGGAA
GAACCTCAGAAATGTCTGCAGTTGGTCTACTTCCAGCTGCACTTCAGGGAATCGATATTAGAGAGATGCTCGCTGGTGCTGCATTGATGG
ATGAAGCAAACAGGACCACTGTGGTTCGGGATAACCCGGCAGCGTTACTTGCTTTGTGTTGGTACTGGGCAACTGATGGAGTTGGATCCA
AGGATATGGTTGTCCTCCCATACAAGGACAGTTTATTACTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTTGGGAAAGAGT
TTGACCTGGACGGTAACCGGGTGAATCAAGGTATCAGCGTTTATGGAAACAAAGGGAGCACAGATCAACATGCCTATATTCAACAACTAC
GAGAAGGTGTGCACAATTTCTTTGCGACATTTATTGAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGCGTTA
CTTGTGGCGACTACCTCTTTGGAATGTTACAGGGAACAAGGTCAGCTCTGTATTCGAACGATCGGGAGTCCATCACAGTCACTGTGCAGG
AAGTGACACCTAGATCTGTTGGAGCTCTAGTAGCACTCTATGAGCGAGCTGTTGGGATTTATGCTTCACTTGTCAACATTAACGCTTATC
ATCAACCTGGTGTGGAAGCTGGGAAAAAAGCTGCTGGAGAAGTTCTTGCTCTTCAAAAGCGTGTCCTTCAAGTACTTAATGAGGCCAGCT
GTAAGCAGCCTGTTGAACCACTTACTCTGGATGAAATAGCTGAACGTTGTCATTGTGAAGACGATATTGAAATGATCTATAAGATTATTG
CACACATGGCTGCTAATGACAGAGCACTTATTGCCGAAGGTAATTGTGGTACTCCTCACAGCATAAAAGTTTATCTGGGAGAGTGCAATG
TTGACGACTTGTATGCCTAGATCTTGCATTGAACATTCTGATGTTTCTGCATACATCCGAGAAATACATATGTGCCCAAGATAGGGTCCG
GCCTTATGGTGGCTGATTATTGGGGATTCCTAACTTAAAATATCCATTTTTTTTTCTTTTCAAAGCACCATCATGTTCACATCTGTTAGC
TGTATCAGAGAGCATATTGCTTCCCCATGATCAAATAAATTTCAGAAAGCTGAGTTTGTTGACACTGCTGCTGTTTATAATATGCTTTTC
TTCTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
gpi	glucose-6-phosphate isomerase	glucose-6-phosphate isomerase

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	6
Solanum lycopersicum	LeMiToLf01	leaf	30679	9
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (36)

Alignment image suppressed for unigene with 36 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U317897	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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