Sol Genomics Network

Unigene SGN-U567539

Unigene Basic Information

Unigene ID:	SGN-U567539
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1440 bp

>SGN-U567539 Tomato 200607 #2 (66 members)
GAATTCATTCATCTTTTTCCTTGTATCTATAAATATATTTTCTGGGGTTCCTCCATTTTTAAGCCACCATTACAGAACCCAAGAAAAAGG
GCCCAAAAATATGAAGCACATAGCCACTTTTTTGCTTTTGGTTTCTGTCTCCACCCTTGTTTTGCAGGTTGTTGCAGAAAATCCAATATC
CCAAGCTAAAGCGGAATCTGCAATCCTTCAGGACTCAATCGTCAAACAGGTTAATGAAAATGAAAAAGCTGGATGGAGAGCTGCACTAAA
CCCTCAATTCTCGAATTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGAGTTAAGCCCACAAGAAAGGGTGATTTGAAGGGCATCCCTAT
TTTAACTCATCCAAAACTTTTGAAGTTACCCCAAGAGTTTGATGCACGAGTGGCTTGGCCTCAGTGTAGCACTATTGGGAGAATTCTTGA
TCAGGGACATTGTGGTTCTTGTTGGGCTTTTGGTGCTGCTGAGTCGTTGTCTGATCGTTTCTGTATTCATTATGGATTGAATATCTCTCT
GTCAGCAAATGATATCATAGCATGCTGTGGCTATTTATGCGGGGATGGTTGTGATGGTGGATATCCGTTAGAAGCTTGGAAATACTTTGT
TCGCAAGGGTGTGGTCACTGAAGAGTGTGACCCTTACTTTGATAATAAGGGATGTTCTCACCCTGGATGTGAACCTGGATATCCCACTCC
ACAGTGCAAGAGGAAGTGTGTTAAAGAGAATCTACTCTGGAGTAAATCCAAGCATTTTGGTATTAATGCATACCTGATTAACTCCGACCC
ATACAGTATCATGACAGAAGTTTACAAGAATGGACCAGTTGAGGTTTCTTTTACTGTTTACGAGGATTTCGCTCACTACAAGTCTGGTGT
TTACAAGCACATAAATGGTGAGGAAATGGGAGGCCATGCTGTTAAGCTCATTGGATGGGGAACCTCTGAGGATGGAGAGGACTATTGGCT
CCTTGCCAATCAATGGAACAGAGGATGGGGTGATGATGGTTACTTCAAGATCAGAAGAGGAACAAACGAGTGTGGCATTGAAGAAGAAGT
GGTTGCAGGAATGCCTTCAGCCAAAAACCTGAACGTGGAACTTGATGTCTCTGATGCTTTACTTGACGCCTCAATGTGATTGCTAATTCT
TCAACTAAACACTAAATAGGATTCAAGTTTCTGAAGACTTGGGGAATAATAACATTTTAAGCTTCATATTCTTCCCCTCTTAAGTTATCT
GCAACATTTGTAATCTGCAGTTGTTCCACAATCCTAATTATCTGTGGAAGTGTTTTCCTTGTCTGTTATGTATTTCTTCACAAGTACTCT
CTCTGCCAATCTTGACCAAGTTAAAACATTATCATATGTTGTACTTGATATTATCAATGAAATGTATTTAGACTTAGTTGTTGCTGTTAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g069090	Solyc02g069090

Genomic locations (0)

None

Library representation (28)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	5
Solanum lycopersicum	LeMiToLf01	leaf	30679	6
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	Sl_StamPet	stamens and petals mixed flowers from pre-anthesis to 3 days post anthesis	117	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	10
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	5
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTSC	seed	2256	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (66)

Alignment image suppressed for unigene with 66 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U312921	Tomato 200607 #1
SGN-U312922	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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