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Unigene SGN-U474861

Unigene Basic Information

Unigene ID:	SGN-U474861
Unigene Build:	Nicotiana tabacum #2
Date:	2008-07-17
Organism:	N.tabacum
Alternative ID:	none
mRNA sequence:	Length: 259 bp

>SGN-U474861 Nicotiana tabacum #2 (1 members)
GACTCTTGCTTTCATCAGTATAAACAATGCCTGGAAAAGATTTCTGAACTGNAGAAAAAACTCTTGGCGTCTCATGAAGAATCCAGACTT
CTTAGTGAGAAAGCTGATAGAGCTGAAAGTGAGATCAAGAAACTGAAAAGGCTGGTTATGGAGCTAACAGAGGAGAAAGAAGCCTCAGTC
CGTGAGTATAAAAACTGTCTGGAGAAAATATCCAAGCTTGAGCATGAACTGTTATGTGCACAAGAGGATGTAAAACGCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Nicotiana tabacum	vNtabmRNA		4516	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E749083
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (1)

Expression data for Unigene: SGN-U474861

Template:	AJ718229_at
Platform:	Affymetrix TobEA
Experimental Design:	TobEA

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|147802454\|emb\|CAN70401.1\|	86.3	7e-16	51.85	243 bp (93.8%)	1
Description:	hypothetical protein [Vitis vinifera]
arabidopsis	blastx	At1G03080.1	67.4	2e-12	43.21	243 bp (93.8%)	1
Description:	kinase interacting family protein \| chr1:731794-737332 REVERSE
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P413430 (88 Aa)

XTLAFISINNALEKISELXKKLLASHEESRLLSEKADRAESEIKKLKRLVMELTEEKEASVREYKNCLEKISKLEHELLCAQEDVKRX

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P496495 (86 Aa)

DSCFHQYKQCLEKISELXKKLLASHEESRLLSEKADRAESEIKKLKRLVMELTEEKEASVREYKNCLEKISKLEHELLCAQEDVKR

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U374019	Nicotiana tabacum #1

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