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Unigene SGN-U472781

Unigene Basic Information

Unigene ID:	SGN-U472781
Unigene Build:	Nicotiana tabacum #2
Date:	2008-07-17
Organism:	N.tabacum
Alternative ID:	none
mRNA sequence:	Length: 313 bp

>SGN-U472781 Nicotiana tabacum #2 (1 members)
GGCGGGAGTGTGAGATCTTATAACTGGGCACGTTGGGAAAATGGAGGTTTTGACTGGCATCGCTGACCTTAAAGACGAGATCGGTAATTA
CCTGGCATCCTTCGATCCATCAAAGCCAGTTACATCTGCTGACGTTCATAAGATTTTTGAGAATCTTGCCCAGAAGCGCAGGCGTATGAC
TTAAGTTATTTTGAATGTTCAAGAAAGTAGCTTTGCGACTACACATGTACTGTAGTTAGTTTTGCTGCTCAACACTAAATCATGTAGCAT
TTTAACTGCTCTATATGTTCTTAGTGTGCTTTACTACTATCTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Nicotiana tabacum	Nt_Mix1	Mixed	5927	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E1146658
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (1)

Expression data for Unigene: SGN-U472781

Template:	CV020253_at
Platform:	Affymetrix TobEA
Experimental Design:	TobEA

Annotations (manual: 0 | blast: 1 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|157360334\|emb\|CAO69545.1\|	83.2	6e-15	72.55	153 bp (48.9%)	2
Description:	unnamed
arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P494330 (56 Aa)

DLITGHVGKMEVLTGIADLKDEIGNYLASFDPSKPVTSADVHKIFENLAQKRRRMT

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P411500 (60 Aa)

GGSGDLITGHVGKMEVLTGIADLKDEIGNYLASFDPSKPVTSADVHKIFENLAQKRRRMT*

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (0)

None

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