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Unigene SGN-U471289

Unigene Basic Information

Unigene ID:	SGN-U471289
Unigene Build:	Nicotiana tabacum #2
Date:	2008-07-17
Organism:	N.tabacum
Alternative ID:	none
mRNA sequence:	Length: 407 bp

>SGN-U471289 Nicotiana tabacum #2 (1 members)
CTTTTAAGTTTCTATCTAGCTACTAGTTCAAATTCTTACCTTTTGTTCAAGTGTTGAATTAACATAAAAATCAGGATGGGGAGAGAGATA
GTGAAAAGTGAGTTGGCTGAAGAGACAACCTTCGACTGGTCATCAGATTACTCGTCAACAACATCCTCTTCGTCTGATGATGAAAAGAGG
ATGCCTTTGTTGGCATTGAACCATGTTTCCTATGTCTGCAAATCCGTTACCAGATCTGCCCAATTCTATGAGCAAGTTCTTGGTTTTGTC
CTCATCAAAAGACCCTCTTCCTTTGACTTTGATGGAGCTTGGTTGTTCAACCATGGAATTGGAATACATTTATTAGGAAAAGAAGATGCA
CAGTCAAAGAGGGGAACAGATAAACCCAAAAGATAACCACATTTCAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Nicotiana tabacum	MAT001		13645	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E1095847
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (1)

Expression data for Unigene: SGN-U471289

Template:	BP529899_at
Platform:	Affymetrix TobEA
Experimental Design:	TobEA

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|157354360\|emb\|CAO46975.1\|	112	2e-24	70.42	213 bp (52.3%)	1
Description:	unnamed
arabidopsis	blastx	At2G28420.1	90.1	4e-19	63.64	198 bp (48.6%)	1
Description:	lactoylglutathione lyase family protein / glyoxalase I family protein \| chr2:12165023-12165577…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P410084 (106 Aa)

MGREIVKSELAEETTFDWSSDYSSTTSSSSDDEKRMPLLALNHVSYVCKSVTRSAQFYEQVLGFVLIKRPSSFDFDGAWLFNHGIGIHLL
GKEDAQSKRGTDKPKR*

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P492794 (112 Aa)

INIKIRMGREIVKSELAEETTFDWSSDYSSTTSSSSDDEKRMPLLALNHVSYVCKSVTRSAQFYEQVLGFVLIKRPSSFDFDGAWLFNHG
IGIHLLGKEDAQSKRGTDKPKR

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (0)

None

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