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Unigene SGN-U465096

Unigene Basic Information

Unigene ID:	SGN-U465096
Unigene Build:	Nicotiana tabacum #2
Date:	2008-07-17
Organism:	N.tabacum
Alternative ID:	none
mRNA sequence:	Length: 370 bp

>SGN-U465096 Nicotiana tabacum #2 (1 members)
GNCGGACCTGGTTATGTCCTAGTAATTGGGGCCACTAATCGACCTGATGCTATTGACCCAGCATTGAGGAGGCCCGGACGATTTGACCGT
GAAATCGCCTTGGGTATCCCAGATGAAAATGCAAGGCTGCAGATTTTGTCTGTGCTTACACGTAACCTAAGAGTTGAAGGTGCATTTGAT
CTCATGAAGATAGCTAGGTCAACCCCAGGATTTGTTGGAGCAGACTTAGCTGCTCTAACTAACAAGGCAGGTAACTTGGCAATGAAGAGG
ATACTAGACTTGAGGAAGGTTGAGCTTTCAAGAGAATTGGTAGATGCTGAAGAATGGTGGAGAAAGCCATGGTCACCTGACGAGATGGAA
AAGCTTAGCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Nicotiana tabacum	vNtabmRNA		4516	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E748774
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (2)

Expression data for Unigene: SGN-U465096

Template:	AJ717920_at
Platform:	Affymetrix TobEA
Experimental Design:	TobEA

Template:	AJ717920_s_at
Platform:	Affymetrix TobEA
Experimental Design:	TobEA

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|157354097\|emb\|CAO46664.1\|	207	2e-52	81.45	363 bp (98.1%)	1
Description:	unnamed
arabidopsis	blastx	At3G01610.1	145	5e-36	62.18	357 bp (96.5%)	1
Description:	Symbols: EMB1354, CDC48C \| CDC48C (EMBRYO DEFECTIVE 1354); ATPase \| chr3:231794-235064 FORWARD
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P404195 (124 Aa)

XGPGYVLVIGATNRPDAIDPALRRPGRFDREIALGIPDENARLQILSVLTRNLRVEGAFDLMKIARSTPGFVGADLAALTNKAGNLAMKR
ILDLRKVELSRELVDAEEWWRKPWSPDEMEKLSX

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P486415 (123 Aa)

XGPGYVLVIGATNRPDAIDPALRRPGRFDREIALGIPDENARLQILSVLTRNLRVEGAFDLMKIARSTPGFVGADLAALTNKAGNLAMKR
ILDLRKVELSRELVDAEEWWRKPWSPDEMEKLS

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U373835	Nicotiana tabacum #1

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