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Unigene SGN-U286349

Unigene Basic Information

Unigene ID:	SGN-U286349
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	286349
mRNA sequence:	Length: 454 bp

>SGN-U286349 Solanum tuberosum #4 (2 members)
CTATGGCGAAGCAACAGAAACAAGAAGAAAAACGGCCTAGCTGCCATGGATGTTTCCACTGACCAGACGGTCATGGATGCCCAAGCGATG
GATACTTCAGAATCAGCTGCTCCAAACACCACGTATAGGTGGATCACTTAGAAAGATGAAGGGAGTACAGAGTGAAAAGGACGAAGAACT
GTCAGGAAAAAGGAAGGCCATGGACAAAGGCTATTTCACAAAAGTGAGAAATTGGAGGAAAGAATCACTAGGAGTGAAGGCAAGATAGAG
AGAACTAAAAATGCCAAAAAGTTGTATGAATGAATGGCTGATTGATTTTTTTTCAACTTTTTCTGATTACTTATGAATGAAATGATTTTG
GGTTGTTTATTTTCTCTCCAAGGGCGTATATATATATATATATCAATATAAGAGTTGCCTCTTGACTCTTATTTCATTAAAAAAAAAAAA
AAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	IVROOT	Root	5850	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P228355 (75 Aa)

LPWMFPLTRRSWMPKRWILQNQLLQTPRIGGSLRKMKGVQSEKDEELSGKRKAMDKGYFTKVRNWRKESLGVKAR

SignalP predicts non-secretion with a score of 0.309

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P88858 (90 Aa)

MAKQQKQEEKGLAAMDVSTDQTVMDAQAMDTSESAAPNTTIGGSLRKMKGVQSEKDEELSGKRKAMDKGYFTKVRNWRKESLGVKEDREN

SignalP predicts non-secretion with a score of 0.026

No InterPro domain matches or not analyzed.

Gene Family (5)

Family Build (I value*)	Family ID	# Members
1.2	3867	4
2	28272	3
5	91357	1
1.1	104481	4
2	125277	3

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U265695	Solanum tuberosum #3

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