Sol Genomics Network

Unigene SGN-U275256

Unigene Basic Information

Unigene ID:	SGN-U275256
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275256
mRNA sequence:	Length: 804 bp

>SGN-U275256 Solanum tuberosum #4 (6 members)
CTTGTCGTCACTGCTCATTTGACTGCTAAACCCTAACCCTCCGACGGCGGCGGCGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCT
AGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAAC
GCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGC
CGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACG
TGTTCTATCTCAGCTATGGAAGAAACCTATTGTGGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGGGCGGT
TGACCCGGTTGTGCTGTACGTGAGTGGTGGAAATACTCAGGTTATTGCGTACAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGA
TATTGCTGTGGGGAATTGCTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGNGTACAACATTGAACAGCTTGC
GAAAAAGGCGAAAAGTTCATTGAACTTCCATATGTTGTAAAGGGAATGGGATGTTTCCTTCAGTGGAATACTGAGCTTCATTGAAGCCAC
AGCTGAGGAGAAGCTGAAAAATACCGAGTGTAGTCCGGCTGACCTTTGTTTCTCTTTGCAGGAAACTCTCTTTGCGATGCTTGT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
DQ294267	glycoprotein endopeptidase

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1759	Peptidase_M22	11
2	25140	Peptidase_M22	7
5	59150	Peptidase_M22	7
1.1	102942	Peptidase M22 glycoprotease - Biological Process: proteolysis (GO:0006508) - Molecular Function: O-sialoglycoprotein endopeptidase activity (GO:0008450)	9
2	123662	Peptidase M22 glycoprotease - Biological Process: proteolysis (GO:0006508) - Molecular Function: O-sialoglycoprotein endopeptidase activity (GO:0008450) Peptidase M22 O-sialoglycoprotein endopeptidase - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: O-sialoglycoprotein endopeptidase activity (GO:0008450)	4
5	133832	Peptidase M22 glycoprotease - Biological Process: proteolysis (GO:0006508) - Molecular Function: O-sialoglycoprotein endopeptidase activity (GO:0008450) Peptidase M22 O-sialoglycoprotein endopeptidase - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: O-sialoglycoprotein endopeptidase activity (GO:0008450)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U247901	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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