Sol Genomics Network

Unigene SGN-U272463

Unigene Basic Information

Unigene ID:	SGN-U272463
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272463
mRNA sequence:	Length: 1553 bp

>SGN-U272463 Solanum tuberosum #4 (10 members)
CATCATCATCATCACAAGAAGAAAGAGCCGAAATGGAGAAGAGAGAGGGCGAAGAGACAGAAAATGGAACAACCCAAGAGAAGGGTTCCA
TTTGTGGATTTGACTCTCTTTATCATCTCCTTCAAACTTCTCTCAGCCCCCAACTTTTCCAGGAAGTCAATCGAATACTTCTGGGCCTAA
ATTGTGGAAAGAAACTTGAGTCTATTGCTCTTCCGCAGCCGGTCAAAGCTCTCTCTGCTAATCACGACTTTGATCTTCAGGCTTTTAGTT
TTTCTGCGGACAAAGAGTCACTTAGAGGACCTCGGATTGTGAGGGTTGGCCTCATTCAGAATTCTATTGCTCTACCCACAACTGAACCTT
TCCTAAACCAAAGGGAGGCCATCTTTCAAAAGTTAATTCCCATGATTGATGCTGCAGGCTCTTCAGGAGTCAACATTCTATGCTTGCAAG
AGGCATGGACGATGCCATTTGCATTTTGTACTCGCGAAAAAAAATGGTGTGAATTTGCTGAAGAGATTGATGGAGAATCAACAAAATTTC
TTCAGCAACTTGCACAAAAATATAACATGGTTATCATTAGTCCAATTCTTGAGAGGGACGTGAACCATGGAGAAACCCTGTGGAACACAG
CAGTAATAATTGGAAATCATGGTAACATAATAGGGAAACATCGGAAGAATCATATACCTAGAGTTGGGGACTTCAACGAGAGTACATATT
ATATGGAAGGGAACACTGGCCATCCCGTGTTTGAGACAGCATATGGCAAGATTGCTGTTAATATATGTTATGGAAGGCACCATCCTCTGA
ACTGGTTAGCTTTTGGGTTAAACGGTGCAGAAATTGTTTTCAACCCATCAGCTACTGTTGGTGAACTTAGTGAACCAATGTGGCCCATAG
AGGCTCGCAACGCAGCAATAGCAAATAGTTATTTTGTTGGTTCAATTAACCGTGTCGGAACAGAAGTTTTCCCTAATCCCTTCACTTCAG
GAGATGGAAAGCCACAACATGCAGATTTTGGGCATTTCTATGGTTCGAGTCATTTTTCTGCACCAGATGCTTCATGTACACCGTCTCTGG
CCCGTCACAAGGATGGATTGTTGATATCTGACATGGATCTCACCCTTTGCCGGCAGTTGAAGGACAAGTGGGGATTTCGAATGACTGCTC
GTTATGACGTCTATGCTGATCTACTCGGTCGTTATGTGAAACAGGATTTTGAGCCACAAGTCATTTCTGATCCCTTGTTACATAAGAGTG
CTTAAAGCTCTACCTTGATCATTAAGGAAGGAAAACAGGTAAGATTGCTTTCGGGCAATCTGTAAAGTATCACAAAGTTTCCATGTTTCA
TGACCATGAAGTGTACGTTCAAGAACATATTTACAATAAAAGAAGTTGTGGAATTTGTACAAATACTGAATTCACAGTGGTGTTAACATC
ATCACTTTGGAATAACTACTTGTGTTAATCAGTACTTTTAACATAGCCTTGGTTAAGGATGGTTACGTTAAAAAAAAAGGATTGGTCAAA
GACCGTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	5
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	472	Ntlse/CNhydtse	38
2	27512	Ntlse/CNhydtse	4
5	61674	Ntlse/CNhydtse	4
1.1	101938	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase - Biological Process: nitrogen compound metabolism (GO:0006807) - Molecular Function: hydrolase activity acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)	28
2	125136	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase - Biological Process: nitrogen compound metabolism (GO:0006807) - Molecular Function: hydrolase activity acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)	3
5	135485	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase - Biological Process: nitrogen compound metabolism (GO:0006807) - Molecular Function: hydrolase activity acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)	3

Preceding Unigenes (2)

Unigene	Build
SGN-U249506	Solanum tuberosum #3
SGN-U250801	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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