Sol Genomics Network

Unigene SGN-U272214

Unigene Basic Information

Unigene ID:	SGN-U272214
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272214
mRNA sequence:	Length: 1510 bp

>SGN-U272214 Solanum tuberosum #4 (11 members)
GAAGATCTGACAATGAAGCAGCACCTTCAATTCTTGAGTCACTGTCCTATGAGGAAGAGGGAGGAGAGTGGAAATTGAGAACACAAAAAA
AAAGGTCCTTTTTTTCACAAAATACAACAACCCATCTTCCTCTTTAGACCCAAAATCTAGGAAAAAAGCAAGATTTTGAGGCTTTTTGAT
AATTTTAGGAGGTGGGTTTGAATTTTTTTTGGGTAAATTTGTAGTGGGATCAAGAATGGTGTGCATAACTGAAGATATGATTAAGCAATT
GCAGACTTCAATGGATGAAATTGCTGAGCCACTTCAGAAGTCTTTCCAGAATGTACATCAGGGGTACCGAACCGAGACACTGGTGAGGTT
TCTCAAAGCTAGGGATGGCAGTGTGTCTAAAGCTCACAAGATGCTTCTTGACTGTTTAAATTGGAGGATAGACAATGAGATCGATCAGAT
ACTTGCAAAGCCAATTGTACCCACTGATTTTTATAGAGGAATGAGGGACACCCAGCTTGTGGGGATGTCTGGATATACAAGAGAGGGTCT
TCCCGTCGTTGCTGTTGGAGTAGGCCTCAGCACATATGACAAAGCATCGATTCACTACTATATTCAATCACATATCCAAATGAATGAATA
CCGTGACCGTATGATATTGCCTTCTGCATCAAAGAAATTTGGGCGGTATATTGGGACCTGTGTTAAGGTTTTGGACATGACTGGTCTAAA
GCTTTCTGCACTAAACCAAATTAAGCTCTTAACTGCTATATCTACCATTGATGACCTAAATTATCCTGAGAAGACAGATACGTATTACAT
TGTTAATGCTCCATACATATTCTCAGCCTGCTGGAAGGTTGTGAGACCTCTTTTACAAGAAAGAACTAAAAAGAAGGTCCAAGTGCTCTC
CGGCTCGGGAAAAGATGAACTGTTGAAGATAATGGATTATGCATCGCTACCACACTTTTGTAAAAGAGAAGGCTCGGGTTCATCTAAACA
TAGTAGAAATGGTACAAATGATAACTGTTTCTCCTTCGATCACGCTTTTCATCAGCAACTCTATGATTATACTAAGCAACAAGCTCTAGC
ATCAGAGGCTGTAGCACCAAGCAAAGAAGGATCGGTCCATGTGACCTTACCTGAGCCTGATCCAGATGATGCAAAGATTGCTGAAACAAT
AGAATCCACATTCCAGAGGATGGGGGAGAAAAACGGAATTTGTCAATCATTTCATGAAATAAAGATCAATGGCAATTGAAGCCTGATTCG
CTGTAGTCTTGGTAACTGCTTATTCTGAATCCGGCTTTTACATGACGAGAGGATTTAAGTAAGCGTTGTTATAGTACTAATATGGCTTGC
ATCATCTCGATGCAGGATTTAGTTAGAAGCTAAGTTGTAACATGGCATTTATGCTACCTTGGGAGTGGACTATCATATGAATAGTCAAAA
ATGTTAATCCTCCCACGAAGTATTTTACACGAATTTCGCTGATTTGATCTGAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	72	CRAL_TRIO_C	165
2	23834	CRAL_TRIO_C CRAL_TRIO_N	10
5	57905	CRAL_TRIO_C CRAL_TRIO_N	10
1.1	101424	Cellular retinaldehyde-binding/triple function C-terminal	202
2	120133	Phosphatidylinositol transfer protein-like N-terminal Cellular retinaldehyde-binding/triple function C-terminal Cellular retinaldehyde-binding/triple function N-terminal	10
5	130422	Phosphatidylinositol transfer protein-like N-terminal Cellular retinaldehyde-binding/triple function C-terminal Cellular retinaldehyde-binding/triple function N-terminal	10

Preceding Unigenes (1)

Unigene	Build
SGN-U246421	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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