Sol Genomics Network

Unigene SGN-U270238

Unigene Basic Information

Unigene ID:	SGN-U270238
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270238
mRNA sequence:	Length: 890 bp

>SGN-U270238 Solanum tuberosum #4 (23 members)
CTCCTCCTCACAATTAACTCTATTCTACTTCAATCAAAGATTTAGAGAAATGGAGACTTTCTTGTTCACATCTGAATCAGTCAACGAGGG
ACATCCCGACAAGCTCTGTGACCAGGTATCCGATGCAGTGCTTGACGCCTGTCTAGCTCAGGACCCTGAAAGCAAAGTTGCTTGTGAGAC
TTGTACCAAGACCAACTTGGTTATGGTCTTTGGAGAGATCACCACCAAGGCCAATATTGATTATGAGAAGATTGTACGTGACACTTGCCG
GGAAATTGGATTTGTGTCCCCTGATGTTGGTTTGGATGCTGACAATTGCAGGGTCCTTGTGAACATTGAGCAGCAGAGCCCTGATATTGC
TCAAGGTGTTCATGGTCATTTGACTAAGCGACCTGAGGAGATTGGTGCTGGTGATCAGGGTCACATGTTTGGCTATGCCACCGACGAGAC
ACCAGAGTTGATGCCCCTTAGCCATGTTCTTGCTACCAAACTTGGAGCTCGCCTTACTGAGGTCCGCAAGAATGGAACTTGCTCTTGGCT
TAGACCTGATGGTAAAACCCAAGTGACTGTTGAGTACCAGAATGACAATGGTGCTATGATTCCTCTACGTGTTCACACTGTTTTGATCTC
CACTCAGCATGATGAGACTGTTACCAATGATGAAATTGCTCGTGATCTCAAAGAGCATGTCATCAAGCCTGTGATCCCCGAGAAGTATCT
TGATGAGAAGACCATTTTCCACCTCAACCCTTCAGCGCCGTTTTGTCATTGGTGGACCTCACGGTGATGCTGGTCTTACTGGCCGCTAGA
TCATCATTGACACCTTATGGAGGTTGGGGTGCTCATGGCAGGTGGTGCTTCCTCTGGGAAGGATCCTACCAAGGTCGACA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	IVROOT	Root	5850	7
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	6
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	216	S-AdoMet_synt	69
2	22153	S-AdoMet_synt	53
5	56384	S-AdoMet_synt	53
1.1	101580	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	69
2	118574	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	50
5	129058	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	50

Preceding Unigenes (1)

Unigene	Build
SGN-U244327	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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