Sol Genomics Network

Unigene SGN-U268227

Unigene Basic Information

Unigene ID:	SGN-U268227
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268227
mRNA sequence:	Length: 1307 bp

>SGN-U268227 Solanum tuberosum #4 (33 members)
TTACAAATGATGAGATTGCCCGCGACCCTTAAGGAGCATGTCATCAAGCCAGTCATCCCAGAGAAGTACCTTGACGAGAAGACAATCTTT
CCACCTTAACCCATCTGGCCGATTCGTTATTGGTGGACCTCATGGTGATGCTGGTCTCACTGGTCGTAAAATCATCATCGACACTTATGG
TGGTTGGGGTGCTCATGGTGGTGGTGCTTTCTCTGGCAAGGACCCAACCAAGGTTGACAGGAGTGGTGCATACATCGTAAGGCAGGCTGC
AAAGAGTATTGTAGCTAGTGGACTCGCTCGCAGATGCATCGTGCAGGTTTCTTATGCCATCGGTGTGCCTGAGCCATTGTCCGTATTCGT
TGACACCTATGGCACTGGAAAGATCCCCGACAGGGACATTTTGAAGATCGTTAAGGAGAACTTCGACTTCAGACCTGGAATGATGTCCAT
TAACTTGGATTTGAAGAGGGGTGGCAATGGGAGATTCTTGAAAACTGCTGCCTATGGTCATTTTGGACGTGACGACGCTGATTTCACATG
GGAAGTTGTCAAGCCCCTCAAGTGGGAAAAGCCCCAAGACTAATAAGTGTCTGAAAATGCTTGCCTATGCTTTTGTTCTTTGTTGTTTGC
TTGTGGCTTTAGAATCCTCTGTGTTTGCTTGTCTTTTTATTTTCTCTTTTGACCCTATTTTTATTATTGTCCTGTTTCCATTGTGTTGGA
TATCTTAGGCCTTGGAATATCAAGGGAAAAAAACTATTATTATATACATAAAAATTAGTGCATTTCTGGAAAAAAAAAAAAAAAATATAT
TGAAAAAAGATGCCTGCTGGTTCACGATGGGAGGTGTCTCTGATTACATTAGTGGTGACACTGATAGCTTCGATGGCAGTTGTCCTTACA
TACATTTAAAAAATTATCATCTGTGTATAGTGCAATGTATATCTGTTTTAGTTTGTTATCTCTGGGTTGACACTCGTGTGCTATTGCCAA
GAATGGCGTGTGAGTTGGTATGGCTGAGCAATGGCCATGCGTTCTAACTGGTGGTGTGCATATATTAGTTTCATGCTAAAAGGGCTGCTA
CCATAGTCTCCTTTAGCAGTTGTGTCACATGGTTTTTGTATTTTGTAGGTTTGTCAAGTTCATAGTGTGTCTAGGCTGTATGGAAGTAAA
GACCAATTCACAAACACATGTAACTGCTTATATTAGATACTCTGATACTCTTGTTTTCTCTACTAATGTCTTGTAATGGCTTTCTACATT
GTAAAAAAGATACTTTGCAGCAGGAGTTGCATTTTGTTCGAAAAAAA

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
DQ235185	DQ235185 S-adenosyl methionine synthase	S-adenosyl methionine synthase
DQ235184	DQ23184 S-adenosyl methionine synthase

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	IVROOT	Root	5850	7
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	6
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	8
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	4
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	216	S-AdoMet_synt	69
2	22153	S-AdoMet_synt	53
5	56384	S-AdoMet_synt	53
1.1	101580	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	69
2	118574	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	50
5	129058	S-adenosylmethionine synthetase - Molecular Function: methionine adenosyltransferase activity (GO:0004478) - Molecular Function: ATP binding (GO:0005524) - Biological Process: one-carbon compound metabolism (GO:0006730)	50

Preceding Unigenes (1)

Unigene	Build
SGN-U243236	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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