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Unigene SGN-U203914

Unigene Basic Information

Unigene ID:	SGN-U203914
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	203914
mRNA sequence:	Length: 375 bp

>SGN-U203914 Capsicum annuum #1 (1 members)
TGTTGTTAGAAATCCTGAAAAAGATTCTCCAACCAAATTCGAGATTTGGGGTCCATCTCGAGTCGAAAAGGAATTCCATGTCTCGCCTTC
TGTCCATGGCTCTGTATATTCAGATGGATGGTTTGAGGGAATTTCATGGAATGATGATGAAACCTTTATTGCATACGTTGCTGAGGAGCC
GGCTCCCTCTAAACCTGTGTTTACGAATTCAGGCTACAAGAAAGGGAACTCTTCAGATAAGGAATGTGGTAGCTGGAAAGGTCAAGGGGA
TTGGGAAGAGGACTGGGGCGAAACGTATCCTGGAAAAAGAGAACCTGCAATTTTCGTTATCAATGTTAACAGTGGAGAAGTACCATCCTG
CTTGAAGGAATAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS12	Placenta	4279	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E512225
[Show Image]

Markers Information (1)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

COSII marker C2_At4g14570 was created with this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|30466066\|dbj\|BAC76411.1\|	185.7	1.2e-46	70.34	351 bp (93.6%)	2
Description:	gi\|30466066\|dbj\|BAC76411.1\| acylamino acid-releasing enzyme [Arabidopsis thaliana]
arabidopsis	blastx	At4g14570.1	185.7	5.2e-48	70.34	351 bp (93.6%)	2
Description:	At4g14570.1 68411.m02031 acylaminoacyl-peptidase like protein
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P158028 (123 Aa)

VVRNPEKDSPTKFEIWGPSRVEKEFHVSPSVHGSVYSDGWFEGISWNDDETFIAYVAEEPAPSKPVFTNSGYKKGNSSDKECGSWKGQGD
WEEDWGETYPGKREPAIFVINVNSGEVPSCLKE

SignalP predicts non-secretion with a score of 0.053

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P38333 (120 Aa)

VVRNPEKDSPTKFEIWGPSRVEKEFHVSPSVHGSVYSDGWFEGISWNDDETFIAYVAEEPAPSKPVFTNSGYKKGNSSDKECGSWKGQGD
WEEDWGETYPGKREPAIFVINVKVEKYHPA

SignalP predicts non-secretion with a score of 0.053

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	350	Peptidase_S9 Ser_estrs	47
2	23010	Peptidase_S9 AXE1 Ser_estrs Pept_Asp_AS	17
5	62619		3
1.1	101582	Peptidase S9 prolyl oligopeptidase active site region - Biological Process: proteolysis (GO:0006508) - Molecular Function: serine-type peptidase activity (GO:0008236)	69
2	119207	Peptidase S9 prolyl oligopeptidase active site region - Biological Process: proteolysis (GO:0006508) - Molecular Function: serine-type peptidase activity (GO:0008236) Terpenoid synthase Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	19
5	129555	Peptidase S9 prolyl oligopeptidase active site region - Biological Process: proteolysis (GO:0006508) - Molecular Function: serine-type peptidase activity (GO:0008236) Terpenoid synthase Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	19

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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