Sol Genomics Network

Unigene SGN-U581467

Unigene Basic Information

Unigene ID:	SGN-U581467
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1059 bp

>SGN-U581467 Tomato 200607 #2 (48 members)
GGGCGATTGGCGGCCAATCGGCCGAATTGGCCAATCATTATTTCATCATTTTGTCTCTCTTAACTTTCTCTTCTCCTTTTCTCCGGCGAC
CTTTTTTTTACTCCGGTCAGCTATCCGCCGGAAAATCGTAATCTATTGGTGTATTCATAGCTTCCTTGATTGTACCTTCTCTTCACCGAT
CTCAAACTTTATATTAGTCATCATGAATCCAGAATACGACTATCTGTTCAAGCTTTTGCTTATTGGAGATTCTGGTGTTGGTAAATCGTG
TCTTCTCTTGAGATTTGCTGATGATTCATATCTTGAGAGTTACATCAGCACCATCGGTGTGGACTTTAAAATCCGCACAGTTGATCAGGA
TGGGAAAACCATTAAACTTCAAATTTGGGATACTGCTGGTCAAGAACGTTTTAGGACAATTACCAGCAGTTACTATCGTGGTGCACATGG
CATAATTGTGGTTTATGATGTAACCGATCAAGAGAGCTTCAATAATGTCAAGCAATGGTTGAGTGAGATAGATCGATATGCAAGTGATAA
TGTGAACAAACTTCTTGTTGGAAACAAGTGCGATCTCACAGCTCAGAAGGTGGTTTCCACAGAGACTGCTCAGGCTTTTGCTGATGAGAT
CGGCATCCCTTTCATGGAAACTAGTGCAAAAAATGCCACCAACGTAGAGCAGGCTTTCATGGCTATGGCTGCTTCAATCAAGAACAGAAT
GGCAAGCCAACCGGCATCAAACAATGCACGACCTCCAACCGTGCAGATCCGAGGACAACCTGTCAACCAAAAGAGCGGTTGCTGCTCATC
TTGAAAGGACGAAGCTCGATGATGATTCTGATGTGGAATGTAAAATTAGTCTCTCTTGATGGCTTGATAGGAAGACTCTTCACTGTTATT
ACTTTCTTTCAACTCTTTATCGACACTCAATTCTTTTCAATCTATTTGGATTAACAATATGTAGAAAATCTAGGAATATTGGTGAATACT
AGTATTTGCTTTCTATTCTTTGGACCTTCATCAAAATGATTTTATCTGCAATTGTGCTATCTTTAGTTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
rab1a	small GTP-binding protein A

Genomic locations (0)

None

Library representation (23)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	8
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (48)

Alignment image suppressed for unigene with 48 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315641	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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