Sol Genomics Network

Unigene SGN-U580443

Unigene Basic Information

Unigene ID:	SGN-U580443
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1132 bp

>SGN-U580443 Tomato 200607 #2 (121 members)
GCCCAACGCCCTTGATGGAGCTGCAGCCAACATAAGCTCCGGGAGGCAATTTTTCTCTCTAAGGATCTATTATTAGTAGTGAATTAAATT
ATTATTTTTGTAGTAAAAATGGCTGGCGGCGTAGCTATTGGAAGTTTTAGTGATTCATTCAGCGTTGTCTCTCTTAAGTCCTATCTTGCC
GAATTCATCTCCACACTCATCTTTGTCTTCGCCGGAGTTGGTTCCGCCATTGCTTACGGCAAGTTGACAACAAATGCTGCACTTGATCCG
GCTGGGCTTGTAGCTATTGCAGTTTGCCATGGATTTGCTCTATTCGTAGCCGTTTCGATTTCCGCTAACATCTCCGGTGGTCATGTTAAC
CCTGCGGTCACCTGTGGATTAACCTTCGGCGGACATATTACCTTTATCACTGGCTCCTTCTACATGCTTGCTCAACTTACCGGCGCCGCT
GTAGCTTGCTTCCTCCTCAAATTCGTCACCGGAGGATGTGCTATTCCAACCCATGGAGTGGGAGCTGGTGTGAGCATACTAGAAGGACTC
GTGATGGAAATAATAATCACATTTGGTTTAGTTTATACTGTGTTCGCAACCGCCGCTGACCCGAAGAAGGGTTCATTGGGCACAATTGCA
CCGATTGCAATTGGTCTCATTGTTGGAGCTAATATTTTGGCTGCCGGACCATTCTCCGGTGGATCAATGAACCCAGCTCGTTCATTTGGA
CCTGCAATGGTTAGTGGTAACTTTGAGGGTTTCTGGATCTACTGGATTGGTCCATTAGTTGGTGGTAGTTTGGCTGGTCTTATTTACACA
AATGTGTTCATGACACAAGAACATGCTCCTTTATCCAATGAGTTCTAAATTGAATTTGTTTGAGTTTGATTTGTGGGTCTAAAAAAAAGC
CCATTTGAATTTCGTTTTTTTTAAAAAAAAAAAAAAAGAGGGAAGAAAAAACAATATTTTTGTTATTTCTTTCTTTGTTTTTTTTTCCCC
CAATTGTTGTATTGTTTTTCTAGTTCTTTGGTTTGCAGCTGTACATCCATTATCTTTTGGTGAGATGTTCTTGTTATGATGCTCTAATTT
GATGAAATCATTCGCAATCATCCATTATCTAGAGTTTAAGATATCTTAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	13
Solanum lycopersicum	Sl_LeafAichi01	leaf 4-week old	108	1
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	9
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	12
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	5
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	5
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	8
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	9
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	7
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	16
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	11
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (121)

Alignment image suppressed for unigene with 121 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (4)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313277	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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