Sol Genomics Network

Unigene SGN-U575871

Unigene Basic Information

Unigene ID:	SGN-U575871
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1274 bp

>SGN-U575871 Tomato 200607 #2 (53 members)
AANCCCAGGTTTTCCCATCCCGNNGNTNAAAANNGGCGGCCNGGGATTGTNATTCGCACCCCCTANAGGGNGAATGTGTGTGATTTGATG
CTTCTCAATCCAAATATGGTTCCCATTATAAAAATTTTTTAGAAAAAAGAAGAACGAATCTTCAACTCCCATAGAGTGATGGCAGAAGTA
ATAGGAGCGCCAGCAGCAGCTCAGGTTAAATCAATCTTTGTATATCCAATTAAATCATGCCGTGGAATTTCTGTTTCTCAAGCACCTATC
ACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTGAATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAAGCTTGCT
CTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGAACCAAATAATGACTCTTATCTAGTTATCAAAGCTCCCGGTATG
GATCCACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCTCGGTCTGGGAGTGGTCTGGTTCTGCCTTGGACGAGGGA
GCTGAGGCAGCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGCTTTAGTGAAGTTAAGGAAATGAGAGTTGTAGAT
CCTAATTATGCTCAAGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATCCCAGGGATCGATGAATGCGTTAAATTCT
CTTCTCAAGGAGCCTGTTCCAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCATTTGCTGAGGATTTGTGGAAGGAG
ATCCAAATCAATAAGTTAACATTTGAGGGTGTCAAACTATGCTCTCGCTGTAAGGTACCTACCATAAATCAAGAAACAACAGTAGCAGGC
TCTGAGCCAACAGAAACTCTCTTGAAATTCCGATCCGATAAGGCCTTGCGTCCGAATAAGAAACAACAAGGGAAGGTATATTTTGGACAG
AACATGGTTTGTTCCGACGCTCTTAGCCATGGAAAAGGCAAGATAGTCAAGGTTGGGGATCCTGTTTATGTCCATAAGGTTGTTCCTTCT
AGTGCTGAGGCTCCAGCTTGAACTCTAGTTGTTCTATCACTGTAATGTAAAATGTGCATCTGAATAAGGTGATCCCAAAAGATAAGAATA
CTAATGTAAGGAAAAATGGTCTTCCAGGCCAATGCTAAATAAATCTACATAAACGTTTCGCCTGTATTTCTTTTCATCATTGTGAATTGC
ATCAAGCCTGGCTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g081880	Solyc02g081880

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	LePS	root 5 weeks old plants	823	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	6
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	4
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (53)

Alignment image suppressed for unigene with 53 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U315128	Tomato 200607 #1
SGN-U315129	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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