Sol Genomics Network

Unigene SGN-U579128

Unigene Basic Information

Unigene ID:	SGN-U579128
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1243 bp

>SGN-U579128 Tomato 200607 #2 (38 members)
GCGTTCTTATCCCGTTTTACCAGCACGCTTCTACCTTCGCCGGTGAAGACTCTTCCTTCAGTTCTCAGTCACTGAACCCTCGCCGGAGCA
TCAAAATGGTAACGTCTGCAATTGCTGGAACGTCAATTGTACCAGTCTCTTCCCGGCACCAAACGTCTTTTTCGTCTCTGCTTTCCTCTA
GAAGCTTAAGGAAAAATGTAGTTTCTGTTCTTCGAAGTCCATATTCTGATTCATCAGATATTGGATTTTCAAGCAAGAAGTTGGGGATCC
CATTAAAGTTCAATGAGTACGAATCCGGTGCTCATACCAATTCAAGCTATGGTGTTATCGTAGCAAAAGAGGGGGCTAATCCGCCCATCA
TGCCCGCCGTGATGACACCAGTGGGCGCGTTGGATCTTTCTACCGTGTTATTCAGGAATCGAATTATCTTCATTGGACAACCAGTCAACT
CTGCAGTTGCTCAGAAAGTAATATCACAACTTGTGACCCTTGCAACTATAGATGAAAACGCAGATATTTTGATCTATCTTAACTGTCCTG
GTGGAAGCACATACTCTGTCTTGGCAATATATGACTGCATGTCATGGATAAAGCCTAAGGTTGGTACAGTATGTTTTGGAGCTGCTGCAA
GCCAAGGAGCACTTCTTCTTGCTGGTGGAGAAAAGGGCATGAGGTATGCAATGCCAAATGCACGTATAATGATTCATCAACCTCAAAGTG
GATGTGGAGGGCACGTGGAGGATGTGCGGCGCCAAGTAAATGAAGCGGTTCAATCTCGCCAGAAAGTCGACAAAATGTATGCTGCTTTTA
CTGGCCAATCAATTGAGATGATACAAACATACACTGAAAGGGATCGTTTTATGTCTTCCGCTGAGGCCATGGAGTTTGGTCTCATTGACG
GGGTGCTAGAAACAGAGTACTAGTTGCAAATGGAAATGATAGCTTGCTTTCAAGAGATGAAAAAACTGCTGTTGATCATTAACTACTTGG
AAACACAAGAAACTGGTTCTTGCAAATTCGTGTCGTAGTTCCTCACATACATCCGATCGATGAACGTTCAAGATCTCCGAAAGCATAATA
TTGAAGGCAATATTGTATTTACTAATTAGTCTCTCCTGCAGATTCACTCTAGCACTTTTACCTGTATTGATCAAAGTCGGTTATTTATAT
GACTAAATTGCAATTCAGAGGTTGTGGTGTACTTTTGCCAAATATATACAAGTACTTTTAACGCAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
TOMCLPP	clp-like energy-dependent protease	protease

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	5
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	8
Solanum lycopersicum	LeMiToLf01	leaf	30679	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U317026	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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