Sol Genomics Network

Unigene SGN-U574431

Unigene Basic Information

Unigene ID:	SGN-U574431
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1584 bp

>SGN-U574431 Tomato 200607 #2 (42 members)
TTCATTGTTTGATATTTTGCCCTCTCCATTCTCAAAATTCTTAATTTTAAACACACAAAATGGAGACTGGTGTTACATGTTGTGCAAGAG
TAACATCTCTTCTCCCAAATGTTTCATCTCAACAATACTCAACTTCAATTGCAACTTCAAGATCCATTTCCCCTTCATTCAACTCAAGGA
GTTTGAAATCAAGCTCATTATTTGGGGAATCATTGCGCGTTGCGCCTAAATCATCACTAAAGGTGTCTAGGACAAAAAATTCTTCTTTGG
TGACAAAATGTGAGATTGGTGATAGCTTGGAAGAATTTCTTTCAAAATCAACCTCAGATAAGGGGTTAATCAGGTTAATGATGTGTATGG
GAGAAGCATTGAGAACAATTGCCTTCAAAGTCAGAACAGCTTCTTGTGGAGGAACAGCTTGTGTCAATTCTTTTGGTGATGAACAGCTTG
CTGTCGATATGCTTGCCGATAAGCTTCTCTTTGAGGCCTTGACATATTCACACTTTTGCAAATATGCTTGTTCTGAGGAAGTTCCTGAGC
TCCAAGACATGGGGGGCCCTGCTGAAGGAGGATTTAGTGTTGCTTTTGATCCACTTGATGGTTCTAGTATTGTGGACACGAACTTTACAG
TTGGAACCATCTTTGGTGTATGGCCCGGGGATAAGTTAACCGGGATCACAGGAAGAGAGCAAGTTGCAGCAGCTATGGGAATATTTGGAC
CGCGAACTACATACGTTCTTGCTCTTAAAGATGTTCCCGGGACCCATGAATTCCTCCTCCTTGACGAAGGAAAATGGCAACATGTTAAGG
ATACAACAGAAATCGGAGAAGGAAAGATGTTCTCCCCTGGAAATTTAAGAGCCACATTTGACAATCCTGATTACGCCAAGCTGATCGAAT
ACTATGTGAAGGAGAAATACACCTTGAGATACACCGGAGGAATGGTGCCTGATGTAAACCAGATAATTGTAAAGGAGAAAGGTATATTCA
CAAACGTGACATCTCCAACAGCTAAGGCGAAACTTAGATTGCTGTTTGAAGTGGCACCGTTAGGATTCTTGATCGAAAAAGCTGGAGGTT
ACAGCAGCGATGGGAAACAATCCGTCCTTGATAAGGTGATCGTTAATCTTGATGACCGGACTCAAGTTGCTTATGGTTCCAAGAATGAGA
TCATTCGATTTGAAGAAACACTCTACGGTTCATCAAGGCTTAAGGCTGGTGCACCAGTTGGTGCTGCTGTTTGAGGCTTGAGAATGCAGC
AGCCCTCTCGTAAATCGTAATGTTTGTTTGTGTTTCTTTTCGCGCTTTCTTTCTAGAGCATCGCGAAAATGCTGTTCCATCAGGTTGTAA
AAGGGAGATAGGTTAAAGACAACAAGGTCTTGTTAAAGAAATGGGAATTGGAACATTTTTTTTTGTATATTGTTGTTTCTATTAACTGGT
GTTCAATATGCTGGATTTCAGATATAAAAGGTTAAAAAAAAGACAAATAATTTGTAGTATTATGTAAGATAAATTTATGTATTACAACTT
GTCTGATTATTGCTTCATTACTATTCTAATATATAAAGGTCGATTTCAATCATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc05g052600	Solyc05g052600

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	6
Solanum lycopersicum	LeMiToLf01	leaf	30679	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	8
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (42)

Alignment image suppressed for unigene with 42 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (5)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315559	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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