Sol Genomics Network

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Unigene SGN-U579906

Unigene Basic Information

Unigene ID:	SGN-U579906
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1144 bp

>SGN-U579906 Tomato 200607 #2 (222 members)
CAAGATTGAACCAGAGCCACAATTGTCCCAAAGAAATGGCAATACAAATGCATATACAAAACATACAAAGTTTTCAACTCAGCCTTAAAA
CTACATTGCCATTTCTCCCAATAATCACCAACAAACTCTTCAAATTGGAAAAAATGGCAACCGTGACAACACAAGCTTCCGCCGCCATTT
TCCGGCCGTGTGCTTCAAGAACCAGGTTCCTTACTGGATCATCTGGAAAGTTAAACAGGGAGGTCTCTTTTAGACCTTCAACTTCTTCGT
CTTACAACTCATTCAAGGTTGAAGCTAAGAAAGGTCAATGGCTTCCTGGCTTAGCCTCTCCTGATTATCTTGATGGCAGTCTCCCAGGAG
ACAATGGTTTTGATCCATTGGGACTTGCGGAGGACCCAGAGAACTTGAAATGGTTCATCCAGGCTGAACTGGTGAATGGTCGTTGGGCTA
TGTTGGGTGTTGCAGGGATGCTGTTGCCTGAAGTTTTCACTAGCATTGGGATACTTAATGTGCCCAAATGGTACGATGCTGGAAAATCAG
AGTACTTTGCATCATCATCCACCCTGTTTGTGATCGAGTTCATCTTGTTCCACTACGTCGAGATCAGAAGGTGGCAAGACATTAAGAACC
CAGGAAGTGTCAACCAAGACCCTATCTTCAAGAACTACAGCTTGCCTCCTAATAAATGTGGATACCCTGGTGGTATTTTCAACCCACTCA
ACTTTGCACCAACTGAAGAGGCCAAGGAGAAGGAACTTGCTAATGGGAGATTGGCTATGTTGGCATTTTTGGGATTTATAGTGCAGCACA
ATGTGACTGGGAAGGGACCTTTTGACAACCTTCTGCAGCACCTCTCTGACCCATGGCACAACACCATCATCCAAACACTCAGCAACTAGA
AAACCATCATCAGAAACTTAATTGAATATATATTGTTACCTTGTAACCATGTTATGAATTTTGATCAAGAATAGAGCTTTGTGGTAAAAC
AAGGAACCTTCCTTTAATGTACAGCGTTTCTTATTCGTGTTATTCCTACTAGATCATCAAAAGAATGTGATTTTGCGCTCTTGTTAGCAT
ATAAAGGCAAAAACCTTTTCTTTTTCTAAAAAAATTCAATGAGGCCTACTTCTCCTGGGGGGGC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc03g115900	Solyc03g115900

Genomic locations (0)

None

Library representation (29)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	32
Solanum lycopersicum	LB	Leaf Mature leaves	3316	4
Solanum lycopersicum	LC	Leaf Mature leaves	5712	16
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	9
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	3
Solanum lycopersicum	Sl_LeafWT01	leaf 1.5-month old plants	106	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	11
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	27
Solanum lycopersicum	cLER	leaf 4 weeks	5127	13
Solanum lycopersicum	cLES	leaf 4 weeks	5243	9
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	21
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	6
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	11
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	11
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	12
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (222)

Alignment image suppressed for unigene with 222 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (5)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312593	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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