Sol Genomics Network

Unigene SGN-U581122

Unigene Basic Information

Unigene ID:	SGN-U581122
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1756 bp

>SGN-U581122 Tomato 200607 #2 (114 members)
CNGCCGGGGAAACATTTCTTTTCTTTTAACTTCGCTCAAAAACCATTTTTCATCAAAAGAACTCAAAAAAAAATGGATCTTCTCTTGCTG
GAGAAGACCTTAATAGGTCTTTTCTTTGCCATTTTAATCGCTATTATCATCTCTAAACTTCGTTCCAAGCGATTCAAACTACCCCCAGGT
CCAATTCCAGTTCCAATTTTTGGGAATTGGCTTCAAGTTGGTGATGATTTGAACCATAGAAACCTTACTGAGTATGCTAAAAAATTTGGT
GATGTGTTCTTGCTAAGAATGGGGCAAAGGAACTTAGCTGTTGTGTCATCCCCTGAATTAGCTAAAGAAGTTTTACACACACAAGGGGTT
GAATTTGGTTCAAGAACAAGAAATGTTGTTTTTGATATTTTTACAGGGAAGGGTCAAGATATGGTTTTTACAGTGTATGGTGAGCACTGG
AGGAAAATGAGGAGGATTATGACTGTACCCTTTTTCACTAACAAAGTTGTGCAGCAGTATAGAGGGGGGTGGGAGTCTGAGGCTGCCAGT
GTAGTTGAGGATGTGAAGAAAAACCCTGAATCTGCTACAAATGGGATTGTTTTGAGGAAAAGATTGCAGCTTATGATGTATAATAACATG
TTTAGGATTATGTTTGATAGGAGATTTGAGAGTGAAGATGATCCCCTTTTTGTTAAGCTTAGGGCTTTGAATGGTGAGAGGAGTAGATTG
GCTCAGAGCTTTGAGTACAACTATGGTGATTTTATCCCAATTTTGAGGCCTTTCTTGAGGGGTTACTTGAAGATTTGTAAGGAGGTTAAG
GAGAAGAGGTTGAAACTATTCAAAGACTACTTTGTTGATGAAAGAAAGAAACTTGCCAATACCAAGAGCATGGACAGCAATGCTCTAAAA
TGTGCCATTGATCACATTCTTGATGCTCAACAGAAAGGAGAGATCAACGAGGATAACGTTCTTTACATTGTTGAGAACATTAATGTTGCT
GCAATCGAAACAACATTGTGGTCAATTGAGTGGGGTATCGCGGAACTAGTCAACCACCCTCACATCCAAAAGAAACTCCGAGACGAGATT
GATACAGTTCTTGGACCAGGAGTGCAAGTGAGTGAGCCAGACATGCCCAAGCTTCCATACCTTCAGGCTGTGATCAAGGAGACTCTTAGA
CTCCGGATGGCAATTCCTCTTTTAGTCCCACACATGAACCTTCATGATGCAAAGCTTGCTGGATACGATATTCCAGCTGAGAGCAAAATC
TTAGTTAACGCTTGGTGGCTAGCTAACAACCCCGCCCACTGGAAGAAACCTGAAGAGTTCAGACCTGAGAGGTTCTTGGAAGAGGAGAAA
CACGTTGAAGCCAATGGCAACGACTTCAGATTTCTTCCTTTCGGTGTTGGCAGGAGGAGTTGCCCCGGAATTATCCTTGCATTGCCAATT
CTTGGCATCACCATTGGACGTTTGGTGCAGAACTTTGAGATGTTGCCTCCTCCAGGGCAGTCGAAGCTCGACACCTCGGAGAAAGGTGGA
CAGTTCAGTCTCCACATTTTGAAGCATTCCACCATTGTGATGAAACCAAGATCTTTCTAAACTTTGTAATACTATCAGTTAATTATGACT
GTTGTTTGTTTGTTCAGAAAATTTTCTTCTCTTTTATGTTTTTCATAAAAGTCTTATTAGACTAGATTCATTATAAGTTTTACCTATATG
ATGTACAATGGTAATTTGGCTTTCTGACAATTGCATTATTTTGACG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (28)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LeHRU	roots Three weeks old	312	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	7
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	8
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	14
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	21
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	6
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	5
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	4
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	6
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	5

mRNA member sequences (114)

Alignment image suppressed for unigene with 114 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 6 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (3)

Unigene	Build
SGN-U313163	Tomato 200607 #1
SGN-U313164	Tomato 200607 #1
SGN-U334189	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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