Sol Genomics Network

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Unigene SGN-U580606

Unigene Basic Information

Unigene ID:	SGN-U580606
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1224 bp

>SGN-U580606 Tomato 200607 #2 (128 members)
GGCGATTGGCGGCCAATCGGCCGAATTCCCATGGCGACCGAATTGACAGCTCTTCCTTCACATTCTCTTCAGGGTTTCTCTAGTAGTCTC
TCTGAAAAAAAATGGCCGACGTTGAATACAGGTGCTTCGTCGGTGGTCTGGCATGGGCCACCACCGACCAAACACTTTCGGAAGCTTTTT
CTCAGTACGGCGAAGTGGTCGAATCCAAGATCATCAATGACCGGGAAACTGGTAGATCTAGAGGATTTGGATTCGTTACCTTCAAGGATG
AGCAAGCCATGAGGGATGCTATTGAAGGGATGAACGGCCAGGATCTTGATGGTCGCAACATCACCGTGAACGAAGCTCAATCACGCGGAG
GCGGTGGAGGTGGAGGTGGAAGAGGCGGGGGTGGTTACGGAGGTGGCCGACGTGAAGGCGGTGGCGGAGGCTACGGTGGTGGCGGCGGCT
ACGGAGGTGGCCGACGTGAAGGCGGCGGCGGCGGCTACGGTGGAGGCGGCTACGGAGGTGGTCGTCGTGAAGGTGGTTACGGTGGAGGCG
GTGGTGGTTATGGAGGAGGTGACCGCTACAACGATCGCTCTTCAAGAGGTGGAGGCGGTGGTGGTTCCGATGGGAACTGGAGGAATTAGA
TTTTCTGTTGGCTTTTTAGATTGGTCTCGTCTGAACTTACTTATGGTTTCGAAGTTTGATTGAAGTTACGTTTATGGTTTTGCCGTGGTT
ACTGTTAGTGTTCTCGTTTTTGACCGCTATTGTTACCGTGATGTTACCCTGTGGATCCTTGTTTACAAAGTTCTCATGAATGGAAGTGAA
TGGAGATTTATTAATTATAGTCCAATCTCCTGTTTGTTTCATCATCTTTGTTAAGCCATTGTCTAGTTGTCTAGCTGTTTTTGTTGGTTT
ACATCAAGTGTCCATCCACATTATTAGCTGTGGCCTATTAGTGGTATTGACTAGTAGTGGTCTCGAGTCAACATTCCGCTATCATATCAA
GTTATCTTCATGGTTCCTCTAAATATCTTCTTGGTTTAGATTCATGATCGAACACGTTTGTTAGACAATCAGATACTGCAGTAGTTTACT
TTTAGTATTAATGCCTAGATTTGGTAGATTTTCGTCAAAACTTTTGAGCGTATGAGTGTCTAGCATCAGTCTCAAGTCTTTGGTGCATTT
TAACTAGTGATTATATCTTGCGCCTGTTAGGATTTTGCCTGAAATTTCAAATCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (30)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	20
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	15
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LeTransC5	Root 1.5-month old plants	561	1
Solanum lycopersicum	Sl_RootGC01		128	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	7
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	6
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	8
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	8
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	9
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	9
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	vSlycmRNA		8362	3

mRNA member sequences (128)

Alignment image suppressed for unigene with 128 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U313019	Tomato 200607 #1
SGN-U313020	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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