Sol Genomics Network

Unigene SGN-U581358

Unigene Basic Information

Unigene ID:	SGN-U581358
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1464 bp

>SGN-U581358 Tomato 200607 #2 (36 members)
GTGAAACATGGTCTCCTCATAGACCCTAGATTTAGCAAGAACATGGCAAGTTGAGTGAAGTTAACTCAATTTGCATAAATTACAATCAAC
TTATACAAGAAGGAAAGGTGAAGTTTCCTAATTACGAGAAGGTTTTATATCACCAACACAATAGAAAATGGTGGATGCAGATTGAAGTTG
CATGTCTGCATATGAGGTGTGAGAAATTAAGCTTTCAGGTACCCTTTTTTGTCCAAGTATGAAATAACAATATCGGCCAAATCATTAGGA
GAGTCACATAGCCCTTGGTTCTGACGTAAAACTATCTCAGATGTTAGGGGTGGCTCGTATGGATCATCAACACCGGTAAAACCTTTTATT
TTCCCAGCTCGAGCGGCCGGGGACAATAACAAATTCTAATTTATCCCTTTAAATCACTACTCTAATTTTCTATAATGTTGCTGCAGCTTT
CTCTTCTTACACTAGTCTTACTATCCCCTGTTTCCGCTGATAATTTCTACCAAGACGCGGCGGTCACGTTTGGTGACCAGCGCGCTCAGA
TACAAGATGGAGGGCGCCTTCTCACATTGTCACTTGATAAAATTTCAGGTTCCGGATTTCAGTCTAAGAATGAGTATTTATTCGGAAGGT
TCGATATGCAGCTTAAACTCGTACCTGGAAATTCTGCTGGCACTGTCACCACATTCTATTTGTCTTCTCAAGGAGCAGGGCATGATGAAA
TTGATTTTGAGTTTCTAGGAAATTCATCAGGACTACCTTACACGGTTCATACCAATGTTTACTCTCAAGGAAAAGGCAATAAAGAACAAC
AATTTCGTCTCTGGTTTGATCCAACTTCGTCGTTCCACACTTACTCTATTGTTTGGAACTCTCAACGGATCATATTTTTGGTGGATAATA
TCCCAATTAGAGTGTTCAACAACCACGAAGCACTTGGTGTTGCATACCCAAAGAATCAAGCAATGAGAGTTTACGCGAGTCTATGGAATG
CTGATGATTGGGCTACACAAGGAGGACGGGTGAAGACAGATTGGTCTATGGCTCCGTTTACAGCTTCTTACAGGAATTTCAATACAAATG
CTTGTGTTTGGTCAGCTGCTACGTCTACTTCGTCTTGTGGAGGTTCTAAGACTGAGTCAGTAAACAATGATGAGACATGGCAAACGCAAC
AACTGAACGCTAATGGAAGAAATAGAATACGATGGGTTCAGCAGAAGTACATGATCTACAATTACTGTGCAGATGCTAATAGGTTCTCTC
AAGGCTTTTCTCCTGAATGCAAGCGTTCAAGGTTCTAAGGCGGATATATATAGTATATGAATGTAAAATTATGTTTGTTTCACTTTTCTA
TTCTTTTAATTTTGATCAGGTAAAAAAAAGAACATAGTGTAATTATTTGTGTATACAATATATTCTTTATTCTTTTTGTAATCATGAAAT
AGAAATAATAATGAATTGTTTTGG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
txetb2	xyloglucan endo-transglycosylase B2

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	5
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	SSH_3DPA	flower 3 days after Anthesis	252	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	9
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (36)

Alignment image suppressed for unigene with 36 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 3 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313305	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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