Sol Genomics Network

Unigene SGN-U568266

Unigene Basic Information

Unigene ID:	SGN-U568266
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1401 bp

>SGN-U568266 Tomato 200607 #2 (214 members)
ATAATCTCTACCGTCCATTCACACATCACAAACAATCTCCACCGTAAGCTCATATTTATTGAAAAAGATACTCCATCTAACTCTTGCTTC
TTTTGTACCAAAGAAAATTCATTCTCTCTTCTATTCTATTCACTTTCTACTAAGAAAATGAAGATGAGGATGATTATGATTTTGTTTCTG
TTGGTAATCATTGGGGGTTTTGTTCATGGAGATGAGAATGAGTCATTCAGGAAGCAACCCACACTAGTGAAGACGGTGAAGGGTACCAAG
ATGTGTGTGAAGGATTGGGAGTGCAACAAATTGTCTAAATTTTGTTGTAATTTGACAATTACTGATTATCTGGATGTTGACCAATTTGAG
CTCCTTTTCACTAAGAGGAACTCACCCGTAGCTCATGCTGTTGGATTCTGGGATTATGGATCTTTCATTAGGGCTGCAGCACTTTACCAG
CCTCTTGGATTTGGTACCACCGGTGGTAAGAAAATGCAGATGAAGGAGATTGCTGCTTTTTTTGGACATGTCGGTAGCAAAACTTCTTGT
GGTTATGGTGTCGCCACTGGCGGACCACTCGCTTATGGTCTATGCTATAACAAAGAAATGAGTCCCAGCCAAGATTACTGTGATGAATAC
TTCAAATTAACCTACCCATGCACTCCTGGAGCCAGATATTACGGTCGTGGTGCCTTGCCTATCTACTGGAACTACAATTATGGAGCTATT
GGTGAAGCCCTCAAGCTTAATCTCTTGGATCATCCTGAATACATTGAACAAAATGCTACCATGGCTTTCCAGGCTGCCATTTGGAGGTGG
ATGAACCCAATGAAGAAGGGTCAGCCTTCAGCTCATGATGCCTTTGTTGGCAACTGGAAGCCCACAAAGAATGATACTTTGTCTAAACGA
GTTCCTGGTTTCGGTACCACCATGAATATTCTCTATGGTGATGGTGTTTGTGGCCAAGGTGATGTTGACGCAATGAACAACATCGTCTCC
CATTACCTCTACTACCTTGACTTGATGGGGGTTGGTCGCGAGGAAGCAGGACCTCACGAAGTACTCAACTGCGCCGAACAAAAACCTTTT
AACCCAACCGCTGTTGCTGCTTCTTGAGATCATCCTACTTTAGCCCCGCCCATACAATAAACGTTGGGAATCATAATTGCCATTCTAGTT
GTTCTATCATGTAATATTTTTGGACTTGCATTTTTTTTTTTTTATGTTCATGGTTTGATTTATAAATATATATATATATGTAATGTGAAG
CTTCTATGTTGTAATTTGTAAAACTGCAATTCTACTGTCCTGTTGCATTTCATCCCCAGGCAAACATCTCTGTTACCCATACTTTGATAC
GGAGCTATCATTGTTTTGCCGAAAATAACATAATTATAAAGCCTATTTCTG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc09g098540	Solyc09g098540

Genomic locations (0)

None

Library representation (36)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	49
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	5
Solanum lycopersicum	LA	Leaf Mature leaves	6589	9
Solanum lycopersicum	LB	Leaf Mature leaves	3316	5
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	12
Solanum lycopersicum	LeMiToLf01	leaf	30679	17
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	20
Solanum lycopersicum	LeWCAD	Seedling Two-week-old seedings	227	1
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	8
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	13
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	5
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	8
Solanum lycopersicum	cTSB	seed	1880	5
Solanum lycopersicum	cTSC	seed	2256	3
Solanum lycopersicum	cTSD	seed	1504	1
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	4

mRNA member sequences (214)

Alignment image suppressed for unigene with 214 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312838	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: