Sol Genomics Network

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Unigene SGN-U580366

Unigene Basic Information

Unigene ID:	SGN-U580366
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1388 bp

>SGN-U580366 Tomato 200607 #2 (121 members)
AGAGTAACCAAGTCAATAGTTATATTTTCATGATTAATTGGACAAGTTTATATATACCAAATAAAAATAACCGGAATATATATTTATTTG
ATGCGGATAATAGCCGCCGGTATAGTATACTTGATGATCCGGATAAACCAGAGACCAATGAGAAATTGAGAATGATGTCTTGTTTAGTCA
ACATCCTCTTTACCTATAAATAAATACCTTATACTTCACCATTTTCTTCCCATCACTTTTTACTATTTCCATTAAAATGAGGCTTTATGC
TTATTCTTTACTTTTTTCTCTCTTGTTGTTAACTGTCTCGGCTGAACAATGTGGTAGACAGGCAGGAGGTGCCCGTTGTGCCGCGGGACT
GTGTTGCAGCAATTTTGGGTGGTGTGGTAATACCAATGACTATTGTGGTCCTGGAAAGTGTCAAAGCCAGTGTCCATCTGGTCCTTCTCC
GAAACCTCCTACCCCTGGCCCTGGTCCTTCTGGTGGAGACATAAGCAGCGTCATCTCAAATTCCATGTTCGATCAGATGCTTAAGCATCG
TAACGAAAATTCTTGTCAAGGAAAGAATAATTTCTACAGTTACAATGCCTTTATCAATGCTGCAAGGTCTTTTCGTGGCTTTGGCACTAC
GGGGGATAACACTGCACGAAAAAGGGAAATTGCTGCTTTCTTTGCTCAAACCTCCCACGAAACTACTGGAGGATGGCCTTCAGCACCTGA
TGGACCCTACGCATGGGGTTACTGTTTCCTTAGAGAACAAGGTAGCCCAGGCGATTACTGTACACCAAGTAGTCAATGGCCTTGTGCTCC
TGGAAGGAAATATTTCGGACGAGGCCCAATTCAAATTTCACACAACTACAACTATGGGCCATGTGGAAGAGCCATTGGAGCGGACCTTTT
AAACAATCCTGATTTAGTAGCCACAGATCCAGTTATCTCATTCAAATCAGCTATCTGGTTCTGGATGACCCCTCAATCACCAAAGCCTTC
TTGCCACGATGTCATCACCGGAAGATGGCAACCATCTGGTGCTGACAGAGCAGCCAATCGCCTCCCTGGATTCGGTGTCATTACAAACAT
CATCAATGGTGGCCTAGAATGTGGTCGTGGGAGTGACAGCAGGGTCCAGGATCGAATTGGGTTCTACAGGAGGTATTGTGGAATTCTTGG
AGTTAGTCCTGGTGACAATCTTGATTGTGGCAACCAAAGGTCTTTTGGAAACGGACTCTTAGTCGATACTATGTAATGACTTCACCATCT
GTTTGTTGTATCCTCTTGTTACAATGCAAGGCCTAGATATGAATAAATTTACTTATGTAATTGTGTTGTAATCTAATGTGACTACGACTT
ATAATCGTTTTTCATTTTAATAAACAAAGACTTAGTCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (26)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	1
Solanum lycopersicum	LeTransC6	leaf 1.5-month old plants	150	2
Solanum lycopersicum	Sl_LeafInf01	Developmental stage	125	1
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	Sl_RootSSH01	root	123	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	62
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	9
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	6
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	4
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (121)

Alignment image suppressed for unigene with 121 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 3 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312558	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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