Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U575871 and SGN-U587047 in the current build, Tomato 200607 #2

Unigene SGN-U315128

Unigene Basic Information

Unigene ID:	SGN-U315128
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315128
mRNA sequence:	Length: 1207 bp

>SGN-U315128 Tomato 200607 #1 (43 members)
TTTGATGCTTGTCAATCCAAATATGGTTCCCATTATAAAAATTTTTTAGAAAAAAGAAGAACGAATCTTCAACTCCCATAGAGTGATGGC
AGAAGTAATAGGAGCGCCAGCAGCAGCTCAGGTTAAATCAATCTTTGTATATCCAATTAAATCATGCCGTGGAATTTCTGTTTCTCAAGC
ACCTATCACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTGAATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAA
GCTTGCTCTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGAACCAAATAATGACTCTTATCTAGTTATCAAAGCTCC
CGGTATGGATCCACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCTCGGTCTGGGAGTGGTCTGGTTCTGCCTTGGA
CGAGGGAGCTGAGGCAGCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGCTTTAGTGAAGTTAAGGAAATGAGAGT
TGTAGATCCTAATTATGCTCAAGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATCCCAGGGATCGATGAATGCGTT
AAATTCTCTTCTCAAGGAGCCTGTTCCAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCATTTGCTGAGGATTTGTG
GAAGGAGATCCAAATCAATAAGTTAACATTTGAGGGTGTCAAACTATGCTCTCGCTGTAAGGTACCTACCATAAATCAAGAAACAACAGT
AGCAGGCTCTGAGCCAACAGAAACTCTCTTGAAATTCCGATCCGATAAGGCCTTGCGTCCGAATAAGAAACAACAAGGGAAGGTATATTT
TGGACAGAACATGGTTTGTTCCGACGCTCTTAGCCATGGAAAAGGCAAGATAGTCAAGGTTGGGGATCCTGTTTATGTCCATAAGGTTGT
TCCTTCTAGTGCTGAGGCTCCAGCTTGAACTCTAGTTGTTCTATCACTGTAATGTAAAATGTGCATCTGAATAAGGTGATCCCAAAAGAT
AAGAATACTAATGTAAGGAAAAATGGTCTTCCAGGCCAATGCTAAATAAATCTACATAAACGTTTCGCCTGTAAAAAAAAAAAACATTGT
GAATTGCATCAAGCCTGGCTTAAAACTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	7
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	4
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (43)

To view details for a particular member sequence, click the SGN-E# identifier.
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Markers Information (0)

Expression Data (6)

Annotations (manual: 2 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101971	MOSC N-terminal beta barrel MOSC	26
2	120112	MOSC N-terminal beta barrel MOSC	10
5	130395	MOSC N-terminal beta barrel MOSC	10

Preceding Unigenes (1)

Unigene	Build
SGN-U214274	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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