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Unigene SGN-U209744

Unigene Basic Information

Unigene ID:	SGN-U209744
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	209744
mRNA sequence:	Length: 254 bp

>SGN-U209744 Petunia hybrida #1 (1 members)
TTATGTTGCTGCTGATTTGAAGCTCACACATCATAAGTCAATTTGCTAAGTTGTCATTTTGTACTTGCTTCTGTACAAAGATGCTACTAA
AACTGCTTTTAAGTCCTCAACTCGACTTGAATGCATGATGCAAGATTATCCTAAAACACTGCCTCCTTCAGCTAGGGTTGGATTCACGGT
GATGGATGCTTGGCTTGCTTATGCACCTGTGAAGAACAACCCTGAAGATGCTGCCAAGGTATGATAAGCCATTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-PP	all floral organs anthesis	1824	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E528093
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|8953711\|dbj\|BAA98074.1\|	112.1	2.2e-24	94.55	165 bp (65.0%)	2
Description:	unnamed protein product [Arabidopsis thaliana]
arabidopsis	blastx	At5g52560.1	112.1	5.1e-26	94.55	165 bp (65.0%)	2
Description:	At5g52560.1 68412.m05897 expressed protein similar to unknown protein (gb\|AAD38661.1)
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P205078 (64 Aa)

VVILYLLLYKDATKTAFKSSTRLECMMQDYPKTLPPSARVGFTVMDAWLAYAPVKNNPEDAAKV

SignalP predicts non-secretion with a score of 0.329

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P42432 (80 Aa)

YVAADLKLTHHKXNLLSCHFVLASYKDATKTAFKSSTRLECMMQDYPKTLPPSARVGFTVMDAWLAYAPVKNNPEDAAKV

SignalP predicts non-secretion with a score of 0.137

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1049	UDPGP	18
2	25774	UDPGP ExsB	6
5	60517	UDPGP ExsB	5
1.1	102494	UTP--glucose-1-phosphate uridylyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: nucleotidyltransferase activity (GO:0016779)	13
2	121919	UTP--glucose-1-phosphate uridylyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: nucleotidyltransferase activity (GO:0016779)	6
5	132926	UTP--glucose-1-phosphate uridylyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: nucleotidyltransferase activity (GO:0016779)	5

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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