| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|1053065|gb|AAA80679.1| |
score: 406 |
e-value: 2e-111 |
Identity: 100% |
Span: 606bp (60.7%) |
Frame: 3 |
| small GTP-binding protein [Solanum lycopersicum] |
| Match: gi|4096662|gb|AAD10389.1| |
score: 396 |
e-value: 2e-108 |
Identity: 97.52% |
Span: 606bp (60.7%) |
Frame: 3 |
| Rab1-like small GTP-binding protein [Petunia x hybrida] |
| Match: gi|224129738|ref|XP_002328790.1| |
score: 382 |
e-value: 3e-104 |
Identity: 94.55% |
Span: 606bp (60.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa] |
| Match: gi|255570958|ref|XP_002526430.1| |
score: 379 |
e-value: 3e-103 |
Identity: 92.08% |
Span: 606bp (60.7%) |
Frame: 3 |
| protein with unknown function [Ricinus communis] >gi223534210|gb|EEF35925.1| protein with unknown function [Ricinus c... |
| Match: gi|225465202|ref|XP_002264623.1| |
score: 375 |
e-value: 4e-102 |
Identity: 91.58% |
Span: 606bp (60.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270242746|emb|CBI29687.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224119896|ref|XP_002331089.1| |
score: 374 |
e-value: 7e-102 |
Identity: 93.07% |
Span: 606bp (60.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118486589|gb|ABK95133.1| unknown [Populus trichocarpa] >gi|222872817|gb|EE... |
| Match: gi|1370162|emb|CAA66447.1| |
score: 365 |
e-value: 3e-99 |
Identity: 91.09% |
Span: 606bp (60.7%) |
Frame: 3 |
| RAB1A [Lotus japonicus] |
| Match: gi|303748|dbj|BAA02115.1| |
score: 359 |
e-value: 3e-97 |
Identity: 87.62% |
Span: 606bp (60.7%) |
Frame: 3 |
| GTP-binding protein [Pisum sativum] >gi738939|prf||2001457G GTP-binding protein |
| Match: gi|255627505|gb|ACU14097.1| |
score: 351 |
e-value: 6e-95 |
Identity: 87.13% |
Span: 606bp (60.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|414832|gb|AAA34003.1| |
score: 351 |
e-value: 6e-95 |
Identity: 87.13% |
Span: 606bp (60.7%) |
Frame: 3 |
| Rab7p [Glycine max] |
| Match: gi|15229836|ref|NP_187779.1| |
score: 351 |
e-value: 6e-95 |
Identity: 86.27% |
Span: 606bp (60.7%) |
Frame: 3 |
| ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding [Arabidopsis thaliana] >gi75338904|sp|Q9Z... |
| Match: gi|1448941|gb|AAB04618.1| |
score: 348 |
e-value: 4e-94 |
Identity: 85.37% |
Span: 606bp (60.7%) |
Frame: 3 |
| ypt-related protein [Brassica rapa subsp. campestris] |
| Match: gi|92893897|gb|ABE91947.1| |
score: 343 |
e-value: 2e-92 |
Identity: 83.58% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras small GTPase, Rab type [Medicago truncatula] |
| Match: gi|115437604|ref|NP_001043336.1| |
score: 332 |
e-value: 3e-89 |
Identity: 80.1% |
Span: 603bp (60.4%) |
Frame: 3 |
| Os01g0558600 [Oryza sativa (japonica cultivar-group)] >gi109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related p... |
| Match: gi|242057717|ref|XP_002458004.1| |
score: 332 |
e-value: 4e-89 |
Identity: 80.79% |
Span: 603bp (60.4%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor] >gi241929979|gb|EES03124.1| hypothetical protein SORBIDRA... |
| Match: gi|116782376|gb|ABK22484.1| |
score: 332 |
e-value: 5e-89 |
Identity: 78.61% |
Span: 603bp (60.4%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|212275502|ref|NP_001130744.1| |
score: 331 |
e-value: 9e-89 |
Identity: 80.3% |
Span: 603bp (60.4%) |
Frame: 3 |
| hypothetical protein LOC100191848 [Zea mays] >gi194690000|gb|ACF79084.1| unknown [Zea mays] >gi|195605598|gb|ACG24629... |
| Match: gi|242089159|ref|XP_002440412.1| |
score: 330 |
e-value: 2e-88 |
Identity: 79.8% |
Span: 594bp (59.5%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor] >gi241945697|gb|EES18842.1| hypothetical protein SORBIDRA... |
| Match: gi|87295018|gb|ABD36921.1| |
score: 329 |
e-value: 3e-88 |
Identity: 78.61% |
Span: 603bp (60.4%) |
Frame: 3 |
| Rab1 [Pinus pinaster] |
| Match: gi|166235969|gb|ABY85791.1| |
score: 327 |
e-value: 1e-87 |
Identity: 78.11% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTPase Rab1 [Larix kaempferi] |
| Match: gi|194700886|gb|ACF84527.1| |
score: 326 |
e-value: 2e-87 |
Identity: 79.6% |
Span: 603bp (60.4%) |
Frame: 3 |
| unknown [Zea mays] >gi238013122|gb|ACR37596.1| unknown [Zea mays] |
| Match: gi|192910784|gb|ACF06500.1| |
score: 326 |
e-value: 2e-87 |
Identity: 78.61% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein RIC1 [Elaeis guineensis] |
| Match: gi|116782525|gb|ABK22540.1| |
score: 325 |
e-value: 4e-87 |
Identity: 79.1% |
Span: 603bp (60.4%) |
Frame: 3 |
| unknown [Picea sitchensis] >gi116784933|gb|ABK23527.1| unknown [Picea sitchensis] >gi|224284724|gb|ACN40093.1| unknow... |
| Match: gi|1370166|emb|CAA98160.1| |
score: 325 |
e-value: 4e-87 |
Identity: 79.6% |
Span: 603bp (60.4%) |
Frame: 3 |
| RAB1C [Lotus japonicus] |
| Match: gi|4586580|dbj|BAA76422.1| |
score: 325 |
e-value: 5e-87 |
Identity: 79.6% |
Span: 603bp (60.4%) |
Frame: 3 |
| rab-type small GTP-binding protein [Cicer arietinum] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At3G11730.1 |
score: 351 |
e-value: 3e-97 |
Identity: 86.27% |
Span: 606bp (60.7%) |
Frame: 3 |
| Symbols: AtRABD1, ATFP8 | ATFP8 (Arabidopsis Rab GTPase homolog D1); GTP binding | chr3:3709496-3711403 REVERSE |
| Match: At4G17530.1 |
score: 322 |
e-value: 3e-88 |
Identity: 78.11% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRab1C, AtRABD2c, RAB1C | RAB1C; GTP binding | chr4:9773734-9775437 REVERSE |
| Match: At1G02130.1 |
score: 318 |
e-value: 4e-87 |
Identity: 76.62% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRab1B, Ara-5, AtRABD2a, ARA5, ATRAB1B | ATRAB1B (Arabidopsis thaliana responsive to abscisic acid 1B); GT... |
| Match: At5G47200.1 |
score: 317 |
e-value: 9e-87 |
Identity: 77.61% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRABD2b, AtRab1A | AtRABD2b/AtRab1A (Arabidopsis Rab GTPase homolog D2b); GTP binding | chr5:19184256-1918... |
| Match: At3G09900.1 |
score: 238 |
e-value: 6e-63 |
Identity: 57.62% |
Span: 609bp (61.0%) |
Frame: 3 |
| Symbols: AtRABE1e, AtRab8E | AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e); GTP binding | chr3:3034692-30363... |
| Match: At5G03520.1 |
score: 236 |
e-value: 2e-62 |
Identity: 56.94% |
Span: 609bp (61.0%) |
Frame: 3 |
| Symbols: AtRab8C, AtRABE1d | AtRABE1d/AtRab8C; GTP binding | chr5:883678-885157 FORWARD |
| Match: At3G46060.2 |
score: 234 |
e-value: 6e-62 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Symbols: Ara-3, AtRABE1c, AtRab8A, ARA3 | ARA3 | chr3:16928893-16930725 FORWARD |
| Match: At3G46060.1 |
score: 234 |
e-value: 6e-62 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Symbols: Ara-3, AtRABE1c, AtRab8A, ARA3 | ARA3; GTP binding | chr3:16928893-16930725 FORWARD |
| Match: At5G59840.1 |
score: 234 |
e-value: 8e-62 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Ras-related GTP-binding family protein | chr5:24124676-24126275 REVERSE |
| Match: At3G53610.3 |
score: 233 |
e-value: 1e-61 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Symbols: AtRab8B, AtRABE1a, ATRAB8 | ATRAB8 | chr3:19887509-19889242 REVERSE |
| Match: At3G53610.2 |
score: 233 |
e-value: 1e-61 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Symbols: AtRab8B, AtRABE1a, ATRAB8 | ATRAB8; GTP binding | chr3:19887509-19889242 REVERSE |
| Match: At3G53610.1 |
score: 233 |
e-value: 1e-61 |
Identity: 56.59% |
Span: 597bp (59.8%) |
Frame: 3 |
| Symbols: AtRab8B, AtRABE1a, ATRAB8 | ATRAB8; GTP binding | chr3:19887509-19889242 REVERSE |
| Match: At4G35860.1 |
score: 189 |
e-value: 3e-48 |
Identity: 46.41% |
Span: 594bp (59.5%) |
Frame: 3 |
| Symbols: AtRABB1b, AtGB2, Atrab2C, ATGB2 | ATGB2 (GTP-BINDING 2); GTP binding | chr4:16987121-16988842 REVERSE |
| Match: At3G46830.1 |
score: 186 |
e-value: 2e-47 |
Identity: 46.45% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRab11A, AtRABA2c | AtRABA2c/AtRab11A (Arabidopsis Rab GTPase homolog A2c); GTP binding | chr3:17257684-17... |
| Match: At4G17170.1 |
score: 183 |
e-value: 1e-46 |
Identity: 45.62% |
Span: 594bp (59.5%) |
Frame: 3 |
| Symbols: AtRABB1c, AtRab2A, AT-RAB2 | AT-RAB2 (Arabidopsis Rab GTPase homolog B1c); GTP binding | chr4:9644919-96462... |
| Match: At3G07410.1 |
score: 183 |
e-value: 1e-46 |
Identity: 53.66% |
Span: 492bp (49.3%) |
Frame: 3 |
| Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPase homolog A5b); GTP binding | chr3:2372491-2373488 REVERSE |
| Match: At1G07410.1 |
score: 183 |
e-value: 2e-46 |
Identity: 44.71% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRABA2b | AtRABA2b (Arabidopsis Rab GTPase homolog A2b); GTP binding | chr1:2276267-2277151 FORWARD |
| Match: At1G09630.1 |
score: 183 |
e-value: 2e-46 |
Identity: 47.15% |
Span: 576bp (57.7%) |
Frame: 3 |
| Symbols: ATRABA2A, ATRAB11C | ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding | chr1:3118352-3119573 REVERSE |
| Match: At5G47520.1 |
score: 182 |
e-value: 2e-46 |
Identity: 47.12% |
Span: 588bp (58.9%) |
Frame: 3 |
| Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPase homolog A5a); GTP binding | chr5:19294823-19295593 REVERSE |
| Match: At5G59150.1 |
score: 182 |
e-value: 3e-46 |
Identity: 44.55% |
Span: 603bp (60.4%) |
Frame: 3 |
| Symbols: AtRABA2d | AtRABA2d (Arabidopsis Rab GTPase homolog A2d); GTP binding | chr5:23894084-23895470 FORWARD |
| Match: At1G16920.1 |
score: 181 |
e-value: 5e-46 |
Identity: 45.71% |
Span: 630bp (63.1%) |
Frame: 3 |
| Symbols: ATRABA4B, ATRABA1B, RAB11 | RAB11 (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding | chr1:5787482-5789140 ... |
| Match: At5G47960.1 |
score: 181 |
e-value: 8e-46 |
Identity: 43.78% |
Span: 615bp (61.6%) |
Frame: 3 |
| Symbols: AtRABA4c, SMG1 | SMG1 (SMALL MOLECULAR WEIGHT G-PROTEIN 1); GTP binding | chr5:19438759-19439699 REVERSE |
| Match: At1G73640.1 |
score: 181 |
e-value: 8e-46 |
Identity: 48.98% |
Span: 582bp (58.3%) |
Frame: 3 |
| Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPase homolog A6a); GTP binding | chr1:27690694-27691648 FORWARD |
| Match: At4G17160.1 |
score: 180 |
e-value: 1e-45 |
Identity: 44.55% |
Span: 594bp (59.5%) |
Frame: 3 |
| Symbols: AtRab2B, AtRABB1a | AtRABB1a/AtRab2B (Arabidopsis Rab GTPase homolog B1a); GTP binding | chr4:9641991-96435... |
| Match: At1G18200.1 |
score: 178 |
e-value: 4e-45 |
Identity: 52.91% |
Span: 516bp (51.7%) |
Frame: 3 |
| Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPase homolog A6b); GTP binding | chr1:6265409-6266652 REVERSE |
|
| 60 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9ZRE2 |
score: 351 |
e-value: 4e-96 |
Identity: 86.27% |
Span: 606bp (60.7%) |
Frame: 3 |
| Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1 |
| Match: P40392 |
score: 332 |
e-value: 2e-90 |
Identity: 80.1% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2 |
| Match: Q05737 |
score: 323 |
e-value: 1e-87 |
Identity: 78.61% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1 |
| Match: P28188 |
score: 318 |
e-value: 5e-86 |
Identity: 76.62% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3 |
| Match: P16976 |
score: 316 |
e-value: 1e-85 |
Identity: 76.7% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2 |
| Match: Q39571 |
score: 301 |
e-value: 4e-81 |
Identity: 74.75% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1 |
| Match: Q6NYB7 |
score: 301 |
e-value: 4e-81 |
Identity: 73.4% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3 |
| Match: P62821 |
score: 301 |
e-value: 4e-81 |
Identity: 73.4% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3 |
| Match: P62820 |
score: 301 |
e-value: 4e-81 |
Identity: 73.4% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3 |
| Match: P62822 |
score: 301 |
e-value: 4e-81 |
Identity: 73.4% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3 |
| Match: P31584 |
score: 301 |
e-value: 6e-81 |
Identity: 75.25% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1 |
| Match: P22125 |
score: 300 |
e-value: 1e-80 |
Identity: 74.13% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1 |
| Match: Q52NJ2 |
score: 299 |
e-value: 2e-80 |
Identity: 72.91% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3 |
| Match: Q05974 |
score: 290 |
e-value: 8e-78 |
Identity: 72.06% |
Span: 609bp (61.0%) |
Frame: 3 |
| Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1 |
| Match: Q2HJH2 |
score: 289 |
e-value: 2e-77 |
Identity: 72.77% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1 |
| Match: P11620 |
score: 288 |
e-value: 4e-77 |
Identity: 71.43% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2 |
| Match: P10536 |
score: 287 |
e-value: 9e-77 |
Identity: 71.43% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1 |
| Match: Q5RE13 |
score: 287 |
e-value: 9e-77 |
Identity: 72.28% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1 |
| Match: Q9D1G1 |
score: 287 |
e-value: 9e-77 |
Identity: 71.92% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1 |
| Match: Q9H0U4 |
score: 287 |
e-value: 9e-77 |
Identity: 72.28% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1 |
| Match: Q4R8X3 |
score: 286 |
e-value: 1e-76 |
Identity: 72.28% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1 |
| Match: Q06AU7 |
score: 286 |
e-value: 2e-76 |
Identity: 72.28% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1 |
| Match: P33723 |
score: 285 |
e-value: 3e-76 |
Identity: 70.59% |
Span: 603bp (60.4%) |
Frame: 3 |
| GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1 |
| Match: Q01890 |
score: 281 |
e-value: 7e-75 |
Identity: 70.15% |
Span: 603bp (60.4%) |
Frame: 3 |
| Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1 |
| Match: P34140 |
score: 277 |
e-value: 7e-74 |
Identity: 69.46% |
Span: 600bp (60.1%) |
Frame: 3 |
| Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2 |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |