| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15237960|ref|NP_199496.1| |
score: 250.4 |
e-value: 3.7e-65 |
Identity: 51.93% |
Span: 813bp (83.0%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi8809667|dbj|BAA97218.1| unnamed protein prod... |
| Match: gi|21554835|gb|AAM63703.1| |
score: 248.4 |
e-value: 1.4e-64 |
Identity: 51.58% |
Span: 813bp (83.0%) |
Frame: 3 |
| unknown [Arabidopsis thaliana] |
| Match: gi|29126350|gb|AAO66542.1| |
score: 238 |
e-value: 1.9e-61 |
Identity: 49.64% |
Span: 813bp (83.0%) |
Frame: 3 |
| gi|29126350|gb|AAO66542.1| unknown protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|46442827|gb|EAL02113.1| |
score: 100.5 |
e-value: 4.7e-20 |
Identity: 31.75% |
Span: 666bp (68.0%) |
Frame: 3 |
| gi|46442827|gb|EAL02113.1| hypothetical protein CaO19.809 [Candida albicans SC5314] >gi|46442956|gb|EAL02241.1| hypot... |
| Match: gi|49114983|gb|AAH72838.1| |
score: 98.21 |
e-value: 2.3e-19 |
Identity: 41.13% |
Span: 420bp (42.9%) |
Frame: 3 |
| LOC443584 protein [Xenopus laevis] |
| Match: gi|19115130|ref|NP_594218.1| |
score: 95.52 |
e-value: 1.5e-18 |
Identity: 28.82% |
Span: 684bp (69.8%) |
Frame: 3 |
| gi|19115130|ref|NP_594218.1| putative RNA-binding protein [Schizosaccharomyces pombe] gi|17367899|sp|O13741|YDR6_SCHP... |
| Match: gi|42794007|ref|NP_766350.2| |
score: 87.81 |
e-value: 3.2e-16 |
Identity: 31.08% |
Span: 612bp (62.4%) |
Frame: 3 |
| gi|42794007|ref|NP_766350.2| DNA segment, Chr 8, ERATO Doi 233, expressed [Mus musculus] |
| Match: gi|45185960|ref|NP_983676.1| |
score: 83.96 |
e-value: 4.6e-15 |
Identity: 28.69% |
Span: 666bp (68.0%) |
Frame: 3 |
| gi|45185960|ref|NP_983676.1| ACR274Wp [Eremothecium gossypii] >gi|44981750|gb|AAS51500.1| ACR274Wp [Eremothecium goss... |
| Match: gi|17539754|ref|NP_502291.1| |
score: 80.49 |
e-value: 5e-14 |
Identity: 28.5% |
Span: 612bp (62.4%) |
Frame: 3 |
| gi|17539754|ref|NP_502291.1| RNA-binding protein like (43.9 kD) (4M851) [Caenorhabditis elegans] gi|15718191|emb|CAC7... |
| Match: gi|26346951|dbj|BAC37124.1| |
score: 80.49 |
e-value: 5e-14 |
Identity: 36.17% |
Span: 420bp (42.9%) |
Frame: 3 |
| gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus] |
| Match: gi|38016127|ref|NP_055829.1| |
score: 79.34 |
e-value: 1.1e-13 |
Identity: 30.49% |
Span: 660bp (67.3%) |
Frame: 3 |
| gi|38016127|ref|NP_055829.1| KIAA0117 protein [Homo sapiens] gi|20809545|gb|AAH29451.1| KIAA0117 protein [Homo sapiens] |
| Match: gi|6324532|ref|NP_014601.1| |
score: 79.34 |
e-value: 1.1e-13 |
Identity: 30.43% |
Span: 666bp (68.0%) |
Frame: 3 |
| gi|6324532|ref|NP_014601.1| Nucleolar Protein; isolated as a mutant exhibiting synthetic lethality with a nop2 ts all... |
| Match: gi|7498869|pir||T20735 |
score: 78.57 |
e-value: 1.9e-13 |
Identity: 34.06% |
Span: 414bp (42.2%) |
Frame: 3 |
| gi|7498869|pir||T20735 hypothetical protein F11A10.2 - Caenorhabditis elegans |
| Match: gi|34863377|ref|XP_234003.2| |
score: 78.18 |
e-value: 2.5e-13 |
Identity: 31.77% |
Span: 543bp (55.4%) |
Frame: 3 |
| gi|34863377|ref|XP_234003.2| similar to DNA segment, Chr 8, ERATO Doi 233, expressed [Rattus norvegicus] |
| Match: gi|39593884|emb|CAE62177.1| |
score: 78.18 |
e-value: 2.5e-13 |
Identity: 30.05% |
Span: 612bp (62.4%) |
Frame: 3 |
| gi|39593884|emb|CAE62177.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae] |
| Match: gi|32422159|ref|XP_331523.1| |
score: 74.71 |
e-value: 2.8e-12 |
Identity: 28.29% |
Span: 657bp (67.0%) |
Frame: 3 |
| gi|32422159|ref|XP_331523.1| hypothetical protein [Neurospora crassa] gi|28920294|gb|EAA29667.1| hypothetical protein... |
| Match: gi|49087268|ref|XP_405589.1| |
score: 73.94 |
e-value: 4.7e-12 |
Identity: 28.68% |
Span: 666bp (68.0%) |
Frame: 3 |
| gi|49087268|ref|XP_405589.1| hypothetical protein AN1452.2 [Aspergillus nidulans FGSC A4] >gi|40745426|gb|EAA64582.1|... |
| Match: gi|48095947|ref|XP_394565.1| |
score: 71.25 |
e-value: 3.1e-11 |
Identity: 28.81% |
Span: 684bp (69.8%) |
Frame: 3 |
| gi|48095947|ref|XP_394565.1| similar to KIAA0117 protein [Apis mellifera] |
| Match: gi|21430048|gb|AAM50702.1| |
score: 68.94 |
e-value: 1.5e-10 |
Identity: 26.34% |
Span: 609bp (62.1%) |
Frame: 3 |
| gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster] |
| Match: gi|24584762|ref|NP_609822.1| |
score: 68.55 |
e-value: 2e-10 |
Identity: 27.88% |
Span: 609bp (62.1%) |
Frame: 3 |
| gi|24584762|ref|NP_609822.1| CG12288-PA [Drosophila melanogaster] gi|7298360|gb|AAF53587.1| CG12288-PA [Drosophila me... |
| Match: gi|38100027|gb|EAA47238.1| |
score: 64.31 |
e-value: 3.7e-09 |
Identity: 30.81% |
Span: 504bp (51.4%) |
Frame: 3 |
| gi|38100027|gb|EAA47238.1| hypothetical protein MG11063.4 [Magnaporthe grisea 70-15] |
| Match: gi|46105869|ref|XP_380574.1| |
score: 62 |
e-value: 1.9e-08 |
Identity: 29.44% |
Span: 603bp (61.5%) |
Frame: 3 |
| gi|46105869|ref|XP_380574.1| hypothetical protein FG00398.1 [Gibberella zeae PH-1] >gi|42544572|gb|EAA67415.1| hypoth... |
| Match: gi|31207793|ref|XP_312863.1| |
score: 58.92 |
e-value: 1.6e-07 |
Identity: 29.46% |
Span: 642bp (65.5%) |
Frame: 3 |
| gi|31207793|ref|XP_312863.1| ENSANGP00000016667 [Anopheles gambiae] gi|21296170|gb|EAA08315.1| ENSANGP00000016667 [An... |
| Match: gi|31207795|ref|XP_312864.1| |
score: 58.54 |
e-value: 2.1e-07 |
Identity: 29.46% |
Span: 642bp (65.5%) |
Frame: 3 |
| gi|31207795|ref|XP_312864.1| ENSANGP00000016551 [Anopheles gambiae] gi|21296237|gb|EAA08382.1| ENSANGP00000016551 [An... |
| Match: gi|46228092|gb|EAK88991.1| |
score: 57.77 |
e-value: 3.5e-07 |
Identity: 25.45% |
Span: 633bp (64.6%) |
Frame: 3 |
| gi|46228092|gb|EAK88991.1| Nop12p nucleolar protein, RRM domain [Cryptosporidium parvum] |
| Match: gi|37535012|ref|NP_921808.1| |
score: 55.45 |
e-value: 1.7e-06 |
Identity: 28.77% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|37535012|ref|NP_921808.1| putative spliceosomal protein [Oryza sativa (japonica cultivar-group)] gi|31432465|gb|AA... |
| Match: gi|19113271|ref|NP_596479.1| |
score: 55.45 |
e-value: 1.7e-06 |
Identity: 31.58% |
Span: 282bp (28.8%) |
Frame: 3 |
| gi|19113271|ref|NP_596479.1| putative rna-binding protein [Schizosaccharomyces pombe] gi|7492931|pir||T40730 probable... |
| Match: gi|422617|pir||S32644 |
score: 54.3 |
e-value: 3.9e-06 |
Identity: 30.94% |
Span: 408bp (41.6%) |
Frame: 3 |
| gi|422617|pir||S32644 nucleolin - African clawed frog gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis] |
| Match: gi|31240455|ref|XP_320641.1| |
score: 54.3 |
e-value: 3.9e-06 |
Identity: 28.98% |
Span: 498bp (50.8%) |
Frame: 3 |
| gi|31240455|ref|XP_320641.1| ENSANGP00000021189 [Anopheles gambiae] gi|21288154|gb|EAA00475.1| ENSANGP00000021189 [An... |
| Match: gi|542588|pir||S41644 |
score: 53.53 |
e-value: 6.6e-06 |
Identity: 27.97% |
Span: 423bp (43.2%) |
Frame: 3 |
| gi|542588|pir||S41644 polyadenylate-binding protein - fruit fly (Drosophila melanogaster) gi|304798|gb|AAA28828.1| po... |
| Match: gi|21593441|gb|AAM65408.1| |
score: 53.53 |
e-value: 6.6e-06 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|15224186|ref|NP_179441.1| |
score: 53.53 |
e-value: 6.6e-06 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| emb2444 (embryo defective 2444); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi42... |
| Match: gi|15228102|ref|NP_181259.1| |
score: 53.14 |
e-value: 8.6e-06 |
Identity: 28.77% |
Span: 621bp (63.4%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|17944383|gb|AAL48083.1| |
score: 53.14 |
e-value: 8.6e-06 |
Identity: 27.97% |
Span: 423bp (43.2%) |
Frame: 3 |
| gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster] |
| Match: gi|24649519|ref|NP_732945.1| |
score: 53.14 |
e-value: 8.6e-06 |
Identity: 27.97% |
Span: 423bp (43.2%) |
Frame: 3 |
| gi|24649519|ref|NP_732945.1| Rox8 CG5422-PD [Drosophila melanogaster] gi|23172126|gb|AAN13978.1| CG5422-PD [Drosophil... |
| Match: gi|23507998|ref|NP_700668.1| |
score: 53.14 |
e-value: 8.6e-06 |
Identity: 23.04% |
Span: 594bp (60.6%) |
Frame: 3 |
| gi|23507998|ref|NP_700668.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23495060|gb|AAN35392.1| hypothetical... |
| Match: gi|24649513|ref|NP_732942.1| |
score: 53.14 |
e-value: 8.6e-06 |
Identity: 27.97% |
Span: 423bp (43.2%) |
Frame: 3 |
| gi|24649513|ref|NP_732942.1| Rox8 CG5422-PB [Drosophila melanogaster] gi|24649515|ref|NP_732943.1| Rox8 CG5422-PC [Dr... |
| Match: gi|49080620|ref|XP_403808.1| |
score: 52.76 |
e-value: 1.1e-05 |
Identity: 31.88% |
Span: 387bp (39.5%) |
Frame: 3 |
| gi|49080620|ref|XP_403808.1| hypothetical protein UM06193.1 [Ustilago maydis 521] >gi|46101864|gb|EAK87097.1| hypothe... |
| Match: gi|18026763|gb|AAL55607.1| |
score: 52.76 |
e-value: 1.1e-05 |
Identity: 22.22% |
Span: 603bp (61.5%) |
Frame: 3 |
| gi|18026763|gb|AAL55607.1| phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana] |
| Match: gi|464252|sp|P20397|NUCL_XENLA |
score: 52.37 |
e-value: 1.5e-05 |
Identity: 29.58% |
Span: 417bp (42.6%) |
Frame: 3 |
| gi|464252|sp|P20397|NUCL_XENLA Nucleolin (Protein C23) gi|104148|pir||S18874 nucleolin - African clawed frog gi|64937... |
| Match: gi|31242307|ref|XP_321584.1| |
score: 52.37 |
e-value: 1.5e-05 |
Identity: 27.4% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|31242307|ref|XP_321584.1| ENSANGP00000011587 [Anopheles gambiae] gi|21288546|gb|EAA00839.1| ENSANGP00000011587 [An... |
| Match: gi|17538232|ref|NP_502136.1| |
score: 52.37 |
e-value: 1.5e-05 |
Identity: 30.99% |
Span: 489bp (49.9%) |
Frame: 3 |
| gi|17538232|ref|NP_502136.1| squamous cell carcinoma antigen recognized by T-cells 3 like (95.4 kD) (4M96) [Caenorhab... |
| Match: gi|14334958|gb|AAK59656.1| |
score: 52.37 |
e-value: 1.5e-05 |
Identity: 26.03% |
Span: 432bp (44.1%) |
Frame: 3 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|31207333|ref|XP_312633.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 30.3% |
Span: 390bp (39.8%) |
Frame: 3 |
| gi|31207333|ref|XP_312633.1| ENSANGP00000015348 [Anopheles gambiae] gi|21295360|gb|EAA07505.1| ENSANGP00000015348 [An... |
| Match: gi|21617920|gb|AAM66970.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 28.3% |
Span: 621bp (63.4%) |
Frame: 3 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|32419407|ref|XP_330147.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 25.37% |
Span: 399bp (40.7%) |
Frame: 3 |
| gi|32419407|ref|XP_330147.1| hypothetical protein [Neurospora crassa] gi|28927154|gb|EAA36110.1| hypothetical protein... |
| Match: gi|42733488|dbj|BAD11341.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 29.3% |
Span: 471bp (48.1%) |
Frame: 3 |
| gi|42733488|dbj|BAD11341.1| BRI1-KD interacting protein 113 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38566951|emb|CAE76253.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 25.37% |
Span: 399bp (40.7%) |
Frame: 3 |
| gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear ribonucleoprotein HRP1 [Neurospora crassa] |
| Match: gi|42408364|dbj|BAD09516.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 29.3% |
Span: 471bp (48.1%) |
Frame: 3 |
| gi|42408364|dbj|BAD09516.1| putative RNA recognition motif (RRM)-containing protein [Oryza sativa (japonica cultivar-... |
| Match: gi|15233246|ref|NP_191094.1| |
score: 51.6 |
e-value: 2.5e-05 |
Identity: 28.83% |
Span: 312bp (31.8%) |
Frame: 3 |
| PHIP1 (PHRAGMOPLASTIN INTERACTING PROTEIN 1); RNA binding / mRNA binding [Arabidopsis thaliana] >gi7019667|emb|CAB757... |
| Match: gi|15228279|ref|NP_187651.1| |
score: 51.22 |
e-value: 3.3e-05 |
Identity: 37.08% |
Span: 264bp (26.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi12322795|gb|AAG51392.1|AC011560_24 hypotheti... |
| Match: gi|4938275|emb|CAB43745.1| |
score: 51.22 |
e-value: 3.3e-05 |
Identity: 23.56% |
Span: 501bp (51.1%) |
Frame: 3 |
| gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens] |
| Match: gi|7706316|ref|NP_057108.1| |
score: 51.22 |
e-value: 3.3e-05 |
Identity: 23.56% |
Span: 501bp (51.1%) |
Frame: 3 |
| gi|7706316|ref|NP_057108.1| CGI-79 protein [Homo sapiens] gi|13124027|sp|Q9Y388|CG79_HUMAN Hypothetical protein CGI-7... |
| Match: gi|47222076|emb|CAG12102.1| |
score: 51.22 |
e-value: 3.3e-05 |
Identity: 32.18% |
Span: 258bp (26.3%) |
Frame: 3 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47229364|emb|CAF99352.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|34193906|gb|AAH56532.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio] |
| Match: gi|23346437|ref|NP_694693.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|23346437|ref|NP_694693.1| splicing factor 3b, subunit 4; splicing factor 3b, subunit 4, 49kD; spliceosome associat... |
| Match: gi|5032069|ref|NP_005841.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|5032069|ref|NP_005841.1| splicing factor 3b, subunit 4; spliceosome-associated protein (U2 snRNP); spliceosomal pr... |
| Match: gi|24119253|ref|NP_705947.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|24119253|ref|NP_705947.1| splicing factor 3b, subunit 4 [Danio rerio] gi|20977551|gb|AAM28203.1| splicing factor 3... |
| Match: gi|34858075|ref|XP_238245.2| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|34858075|ref|XP_238245.2| similar to Sf3b4 protein [Rattus norvegicus] |
| Match: gi|45360881|ref|NP_989116.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|45360881|ref|NP_989116.1| Spx-prov protein [Xenopus tropicalis] >gi|38512254|gb|AAH61357.1| Spx-prov protein [Xeno... |
| Match: gi|38109806|gb|EAA55617.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 32.33% |
Span: 396bp (40.4%) |
Frame: 3 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
| Match: gi|34015145|gb|AAQ56342.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 35.16% |
Span: 270bp (27.6%) |
Frame: 3 |
| gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|35215045|dbj|BAC92404.1| |
score: 50.83 |
e-value: 4.3e-05 |
Identity: 35.16% |
Span: 270bp (27.6%) |
Frame: 3 |
| gi|35215045|dbj|BAC92404.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] gi|35215184|dbj... |
| Match: gi|21314767|ref|NP_149105.2| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 31.17% |
Span: 231bp (23.6%) |
Frame: 3 |
| gi|21314767|ref|NP_149105.2| MADP-1 protein [Homo sapiens] gi|18490399|gb|AAH22543.1| MADP-1 protein [Homo sapiens] |
| Match: gi|6178156|dbj|BAA86200.1| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 31.25% |
Span: 375bp (38.3%) |
Frame: 3 |
| gi|6178156|dbj|BAA86200.1| nucleolin like protein CiRGG1 [Ciona intestinalis] |
| Match: gi|33873902|gb|AAH10177.1| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 31.17% |
Span: 231bp (23.6%) |
Frame: 3 |
| gi|33873902|gb|AAH10177.1| MADP-1 protein [Homo sapiens] |
| Match: gi|34852000|ref|XP_226582.2| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 29.6% |
Span: 363bp (37.0%) |
Frame: 3 |
| gi|34852000|ref|XP_226582.2| similar to DNA segment, Chr 8, ERATO Doi 233, expressed [Rattus norvegicus] |
| Match: gi|42408160|dbj|BAD09298.1| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 28.21% |
Span: 462bp (47.1%) |
Frame: 3 |
| gi|42408160|dbj|BAD09298.1| putative RNA-binding protein cp33 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14211667|dbj|BAB56132.1| |
score: 50.45 |
e-value: 5.6e-05 |
Identity: 31.17% |
Span: 231bp (23.6%) |
Frame: 3 |
| gi|14211667|dbj|BAB56132.1| MADP-1 protein [Homo sapiens] |
| Match: gi|48097884|ref|XP_393914.1| |
score: 50.06 |
e-value: 7.3e-05 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| PREDICTED: similar to splicing factor 3b, subunit 4 [Apis mellifera] |
| Match: gi|17530817|ref|NP_511058.1| |
score: 50.06 |
e-value: 7.3e-05 |
Identity: 27.4% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|17530817|ref|NP_511058.1| Spliceosomal protein on the X CG3780-PA [Drosophila melanogaster] gi|7290689|gb|AAF46136... |
| Match: gi|1279382|emb|CAA65831.1| |
score: 50.06 |
e-value: 7.3e-05 |
Identity: 27.4% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster] |
| Match: gi|1002380|gb|AAC47514.1| |
score: 49.68 |
e-value: 9.5e-05 |
Identity: 26.42% |
Span: 471bp (48.1%) |
Frame: 3 |
| gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein |
| Match: gi|1176668|sp|Q09442|YP85_CAEEL |
score: 49.68 |
e-value: 9.5e-05 |
Identity: 26.42% |
Span: 471bp (48.1%) |
Frame: 3 |
| gi|1176668|sp|Q09442|YP85_CAEEL Hypothetical RNA-binding protein C08B11.5 in chromosome II gi|7495645|pir||T19069 hyp... |
| Match: gi|28374170|gb|AAH45264.1| |
score: 49.68 |
e-value: 9.5e-05 |
Identity: 26.03% |
Span: 432bp (44.1%) |
Frame: 3 |
| gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis] |
| Match: gi|39587756|emb|CAE67774.1| |
score: 49.29 |
e-value: 0.00012 |
Identity: 26.42% |
Span: 471bp (48.1%) |
Frame: 3 |
| gi|39587756|emb|CAE67774.1| Hypothetical protein CBG13349 [Caenorhabditis briggsae] |
| Match: gi|21313088|ref|NP_080301.1| |
score: 49.29 |
e-value: 0.00012 |
Identity: 31.17% |
Span: 231bp (23.6%) |
Frame: 3 |
| zinc finger CCHC-type and RNA binding motif 1 [Mus musculus] >gi81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc f... |
| Match: gi|34867757|ref|XP_343321.1| |
score: 49.29 |
e-value: 0.00012 |
Identity: 31.17% |
Span: 231bp (23.6%) |
Frame: 3 |
| gi|34867757|ref|XP_343321.1| similar to MADP-1 protein [Rattus norvegicus] |
| Match: gi|49076696|ref|XP_402294.1| |
score: 48.91 |
e-value: 0.00016 |
Identity: 28.31% |
Span: 486bp (49.6%) |
Frame: 3 |
| gi|49076696|ref|XP_402294.1| hypothetical protein UM04679.1 [Ustilago maydis 521] >gi|46100200|gb|EAK85433.1| hypothe... |
| Match: gi|33359633|gb|AAQ17064.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 33.03% |
Span: 324bp (33.1%) |
Frame: 3 |
| gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio] |
| Match: gi|26328597|dbj|BAC28037.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus] |
| Match: gi|18875338|ref|NP_573459.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre-RNA subunit 2; cleavage stimulation factor, 3' pre-R... |
| Match: gi|33359635|gb|AAQ17065.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 30.56% |
Span: 324bp (33.1%) |
Frame: 3 |
| gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio] gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio] |
| Match: gi|7446344|pir||JC5437 |
score: 48.52 |
e-value: 0.00021 |
Identity: 30.15% |
Span: 399bp (40.7%) |
Frame: 3 |
| gi|7446344|pir||JC5437 spliceosome-associated protein 49 - Caenorhabditis elegans |
| Match: gi|6322128|ref|NP_012203.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 33.75% |
Span: 228bp (23.3%) |
Frame: 3 |
| gi|6322128|ref|NP_012203.1| U1snRNP 70K protein homolog; Snp1p [Saccharomyces cerevisiae] gi|266985|sp|Q00916|RU17_YE... |
| Match: gi|22478042|gb|AAH36719.1| |
score: 48.52 |
e-value: 0.00021 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus musculus] |
| Match: gi|5531845|gb|AAD44497.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 20.21% |
Span: 501bp (51.1%) |
Frame: 3 |
| gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens] |
| Match: gi|21619877|gb|AAH33135.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kD [Homo sapiens] |
| Match: gi|15530220|gb|AAH13889.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 31.43% |
Span: 294bp (30.0%) |
Frame: 3 |
| gi|15530220|gb|AAH13889.1| Hypothetical protein FLJ10377 [Homo sapiens] |
| Match: gi|8922388|ref|NP_060547.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 31.43% |
Span: 294bp (30.0%) |
Frame: 3 |
| gi|8922388|ref|NP_060547.1| hypothetical protein FLJ10377 [Homo sapiens] gi|7022371|dbj|BAA91575.1| unnamed protein p... |
| Match: gi|4557493|ref|NP_001316.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens] gi|461847|sp|P33240|CST2_HUMAN Cleav... |
| Match: gi|27807239|ref|NP_777110.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 26.53% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Bos taurus] gi|24416593|gb|AA... |
| Match: gi|41053419|ref|NP_956615.1| |
score: 48.14 |
e-value: 0.00028 |
Identity: 28.8% |
Span: 348bp (35.5%) |
Frame: 3 |
| gi|41053419|ref|NP_956615.1| hypothetical protein MGC56258 [Danio rerio] gi|30353878|gb|AAH51781.1| Hypothetical prot... |
| Match: gi|10801574|dbj|BAB16700.1| |
score: 47.75 |
e-value: 0.00036 |
Identity: 29.55% |
Span: 390bp (39.8%) |
Frame: 3 |
| gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori] |
| Match: gi|48102436|ref|XP_395357.1| |
score: 47.75 |
e-value: 0.00036 |
Identity: 27.86% |
Span: 414bp (42.2%) |
Frame: 3 |
| gi|48102436|ref|XP_395357.1| similar to TIA-1 homologue [Apis mellifera] |
| Match: gi|32420169|ref|XP_330528.1| |
score: 47.75 |
e-value: 0.00036 |
Identity: 27.66% |
Span: 390bp (39.8%) |
Frame: 3 |
| gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora crassa] gi|28925605|gb|EAA34626.1| hypothetical protein... |
| Match: gi|27804344|gb|AAO22235.1| |
score: 47.75 |
e-value: 0.00036 |
Identity: 28.37% |
Span: 414bp (42.2%) |
Frame: 3 |
| gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio] |
| Match: gi|632500|gb|AAB50269.1| |
score: 47.37 |
e-value: 0.00047 |
Identity: 26% |
Span: 426bp (43.5%) |
Frame: 3 |
| gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit |
| Match: gi|38109806|gb|EAA55617.1| |
score: 43.9 |
e-value: 0.005 |
Identity: 27.66% |
Span: 387bp (39.5%) |
Frame: 3 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
|
| 1 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 28 hits recorded |
| Match: At5g46840.1 |
score: 250.4 |
e-value: 9.9e-67 |
Identity: 51.93% |
Span: 813bp (83.0%) |
Frame: 3 |
| At5g46840.1 68412.m05200 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g18510.1 |
score: 53.53 |
e-value: 1.8e-07 |
Identity: 26.71% |
Span: 432bp (44.1%) |
Frame: 3 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At2g37220.1 |
score: 53.14 |
e-value: 2.3e-07 |
Identity: 28.77% |
Span: 621bp (63.4%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g55340.1 |
score: 51.6 |
e-value: 6.8e-07 |
Identity: 28.83% |
Span: 312bp (31.8%) |
Frame: 3 |
| At3g55340.1 68410.m05676 RNA recognition motif (RRM) - containing protein low similarity to nucleolar phosphoprotein ... |
| Match: At3g10400.1 |
score: 51.22 |
e-value: 8.8e-07 |
Identity: 37.08% |
Span: 264bp (26.9%) |
Frame: 3 |
| At3g10400.1 68410.m01125 RNA recognition motif (RRM) - containing protein low similarity to splicing factor SC35 [Ara... |
| Match: At4g00830.1 |
score: 47.37 |
e-value: 1.3e-05 |
Identity: 26.76% |
Span: 408bp (41.6%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At5g50250.1 |
score: 46.98 |
e-value: 1.7e-05 |
Identity: 30.33% |
Span: 363bp (37.0%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g13224.2 |
score: 45.44 |
e-value: 4.8e-05 |
Identity: 24.32% |
Span: 441bp (45.0%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g21440.1 |
score: 44.67 |
e-value: 8.3e-05 |
Identity: 40.32% |
Span: 186bp (19.0%) |
Frame: 3 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g24770.1 |
score: 44.67 |
e-value: 8.3e-05 |
Identity: 29.29% |
Span: 414bp (42.2%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g71800.1 |
score: 43.9 |
e-value: 0.00014 |
Identity: 27.84% |
Span: 282bp (28.8%) |
Frame: 3 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At3g13224.1 |
score: 43.51 |
e-value: 0.00018 |
Identity: 26.53% |
Span: 294bp (30.0%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g19610.1 |
score: 43.13 |
e-value: 0.00024 |
Identity: 32.08% |
Span: 306bp (31.2%) |
Frame: 3 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g50250.1 |
score: 41.2 |
e-value: 0.001 |
Identity: 27.55% |
Span: 291bp (29.7%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At5g40490.1 |
score: 40.82 |
e-value: 0.001 |
Identity: 20.65% |
Span: 462bp (47.1%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At3g52150.1 |
score: 40.82 |
e-value: 0.001 |
Identity: 29.63% |
Span: 381bp (38.9%) |
Frame: 3 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At3g47120.1 |
score: 40.05 |
e-value: 0.002 |
Identity: 26.97% |
Span: 264bp (26.9%) |
Frame: 3 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g53460.1 |
score: 40.05 |
e-value: 0.002 |
Identity: 33.71% |
Span: 264bp (26.9%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At5g12190.1 |
score: 40.05 |
e-value: 0.002 |
Identity: 26.36% |
Span: 327bp (33.4%) |
Frame: 3 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At3g53460.2 |
score: 40.05 |
e-value: 0.002 |
Identity: 33.71% |
Span: 264bp (26.9%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g22100.1 |
score: 39.66 |
e-value: 0.003 |
Identity: 24.03% |
Span: 387bp (39.5%) |
Frame: 3 |
| At2g22100.1 68409.m02379 RRM-containing RNA-binding protein |
| Match: At3g14100.1 |
score: 39.28 |
e-value: 0.003 |
Identity: 31.46% |
Span: 264bp (26.9%) |
Frame: 3 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At2g19380.1 |
score: 38.51 |
e-value: 0.006 |
Identity: 29.73% |
Span: 222bp (22.7%) |
Frame: 3 |
| At2g19380.1 68409.m02052 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At5g44200.1 |
score: 38.51 |
e-value: 0.006 |
Identity: 32.47% |
Span: 228bp (23.3%) |
Frame: 3 |
| At5g44200.1 68412.m04876 nuclear cap binding protein, putative similar to SP|P52298 20 kDa nuclear cap binding protei... |
| Match: At2g22090.1 |
score: 38.51 |
e-value: 0.006 |
Identity: 31.51% |
Span: 219bp (22.3%) |
Frame: 3 |
| At2g22090.1 68409.m02377 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At2g22090.2 |
score: 38.51 |
e-value: 0.006 |
Identity: 31.51% |
Span: 219bp (22.3%) |
Frame: 3 |
| At2g22090.2 68409.m02378 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At3g52660.1 |
score: 38.12 |
e-value: 0.008 |
Identity: 25.77% |
Span: 288bp (29.4%) |
Frame: 3 |
| At3g52660.1 68410.m05372 RNA recognition motif (RRM) - containing protein heterogeneous nuclear ribonucleoprotein R, ... |
| Match: At5g46840.1 |
score: 38.12 |
e-value: 0.008 |
Identity: 29.08% |
Span: 375bp (38.3%) |
Frame: 3 |
| At5g46840.1 68412.m05200 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
|
