Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

All Stored BLAST annotations for SGN-U577314
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|115833|sp|P27524|CB4A_SOLLC score: 494 e-value: 5e-138 Identity: 100% Span: 768bp (82.1%) Frame: 1
RecName:
Match: gi|110377772|gb|ABG73416.1| score: 464 e-value: 6e-129 Identity: 92.22% Span: 768bp (82.1%) Frame: 1
chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Match: gi|115834|sp|P27525|CB4B_SOLLC score: 455 e-value: 3e-126 Identity: 89.58% Span: 768bp (82.1%) Frame: 1
RecName:
Match: gi|8954298|gb|AAD27882.2|AF139470_1 score: 447 e-value: 6e-124 Identity: 86.33% Span: 765bp (81.7%) Frame: 1
chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Match: gi|147804704|emb|CAN71620.1| score: 440 e-value: 7e-122 Identity: 84.44% Span: 768bp (82.1%) Frame: 1
hypothetical
Match: gi|118486723|gb|ABK95197.1| score: 437 e-value: 8e-121 Identity: 82.88% Span: 768bp (82.1%) Frame: 1
unknown
Match: gi|118487218|gb|ABK95437.1| score: 436 e-value: 1e-120 Identity: 82.1% Span: 768bp (82.1%) Frame: 1
unknown
Match: gi|543939|sp|P36494|CB4_SPIOL score: 433 e-value: 9e-120 Identity: 81.4% Span: 765bp (81.7%) Frame: 1
gi|543939|sp|P36494|CB4_SPIOL Chlorophyll A-B binding protein CP24, chloroplast precursor gi|541819|pir||S40210 chlor...
Match: gi|50313237|gb|AAT74560.1| score: 413 e-value: 1e-113 Identity: 80.16% Span: 750bp (80.1%) Frame: 1
Lhcb6 protein [Brassica rapa subsp. pekinensis]
Match: gi|15218330|ref|NP_173034.1| score: 410 e-value: 1e-112 Identity: 79.53% Span: 756bp (80.8%) Frame: 1
LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6); chlorophyll binding [Arabidopsis thaliana] >gi8927661|gb|AAF82152.1|...
Match: gi|4741960|gb|AAD28777.1|AF134130_1 score: 409 e-value: 2e-112 Identity: 79.13% Span: 756bp (80.8%) Frame: 1
Lhcb6 protein [Arabidopsis thaliana]
Match: gi|194705338|gb|ACF86753.1| score: 403 e-value: 1e-110 Identity: 86.24% Span: 648bp (69.2%) Frame: 1
unknown
Match: gi|195617280|gb|ACG30470.1| score: 400 e-value: 6e-110 Identity: 85.32% Span: 648bp (69.2%) Frame: 1
chlorophyll a-b binding protein CP24 [Zea mays] >gi195639966|gb|ACG39451.1| chlorophyll a-b binding protein CP24 [Zea...
Match: gi|162461245|ref|NP_001105375.1| score: 392 e-value: 2e-107 Identity: 83.94% Span: 648bp (69.2%) Frame: 1
chlorophyll a/b-binding apoprotein CP24 precursor [Zea mays] >gi733458|gb|AAA64416.1| chlorophyll a/b-binding apoprot...
Match: gi|167966192|gb|ACA13177.1| score: 389 e-value: 1e-106 Identity: 84.69% Span: 627bp (67.0%) Frame: 1
chloroplast a/b binding protein cab-PhE11 [Phyllostachys edulis]
Match: gi|115458738|ref|NP_001052969.1| score: 385 e-value: 3e-105 Identity: 82.41% Span: 648bp (69.2%) Frame: 1
Os04g0457000 [Oryza sativa (japonica cultivar-group)] >gi21740892|emb|CAD40888.1| OSJNBa0036B21.6 [Oryza sativa (japo...
Match: gi|116309995|emb|CAH67022.1| score: 383 e-value: 1e-104 Identity: 82.41% Span: 648bp (69.2%) Frame: 1
H0523F07.10 [Oryza sativa (indica cultivar-group)]
Match: gi|168009690|ref|XP_001757538.1| score: 381 e-value: 5e-104 Identity: 83.73% Span: 627bp (67.0%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi168009894|ref|XP_001757640.1| predicted protein [Physcomit...
Match: gi|192764579|gb|ACF05833.1| score: 325 e-value: 3e-87 Identity: 89.22% Span: 498bp (53.2%) Frame: 1
chloroplast light-harvesting complex II protein [Populus tremula] >gi192764581|gb|ACF05834.1| chloroplast light-harve...
Match: gi|192764617|gb|ACF05852.1| score: 323 e-value: 1e-86 Identity: 88.62% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|192764591|gb|ACF05839.1| score: 323 e-value: 2e-86 Identity: 88.62% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|192764599|gb|ACF05843.1| score: 323 e-value: 1e-86 Identity: 88.62% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|192764597|gb|ACF05842.1| score: 323 e-value: 2e-86 Identity: 88.62% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|192764575|gb|ACF05831.1| score: 322 e-value: 4e-86 Identity: 88.62% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|192764577|gb|ACF05832.1| score: 320 e-value: 1e-85 Identity: 88.02% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|125590602|gb|EAZ30952.1| score: 318 e-value: 5e-85 Identity: 72.86% Span: 630bp (67.3%) Frame: 1
hypothetical protein OsJ_15029 [Oryza sativa Japonica Group]
Match: gi|192764595|gb|ACF05841.1| score: 318 e-value: 5e-85 Identity: 87.43% Span: 498bp (53.2%) Frame: 1
chloroplast
Match: gi|194689410|gb|ACF78789.1| score: 287 e-value: 1e-75 Identity: 89.26% Span: 447bp (47.8%) Frame: 1
unknown [Zea mays]
Match: gi|60549178|gb|AAX23999.1| score: 284 e-value: 7e-75 Identity: 86.39% Span: 441bp (47.1%) Frame: 1
gi|60549178|gb|AAX23999.1| chloroplast chlorophyll a/b-binding protein CP24 precursor [Fragaria x ananassa]
Match: gi|154101549|gb|ABS58590.1| score: 243 e-value: 1e-62 Identity: 88.8% Span: 375bp (40.1%) Frame: 1
chloroplast
Match: gi|195640768|gb|ACG39852.1| score: 205 e-value: 5e-51 Identity: 87.74% Span: 318bp (34.0%) Frame: 1
hypothetical protein [Zea mays]
Match: gi|147795581|emb|CAN69989.1| score: 142 e-value: 5e-32 Identity: 43.72% Span: 531bp (56.7%) Frame: 1
hypothetical protein [Vitis vinifera]
Match: gi|157342500|emb|CAO65212.1| score: 142 e-value: 5e-32 Identity: 43.72% Span: 531bp (56.7%) Frame: 1
unnamed
Match: gi|118489607|gb|ABK96605.1| score: 141 e-value: 7e-32 Identity: 44.44% Span: 531bp (56.7%) Frame: 1
unknown [Populus trichocarpa x Populus deltoides]
Match: gi|218191630|gb|EEC74057.1| score: 140 e-value: 2e-31 Identity: 44.02% Span: 606bp (64.7%) Frame: 1
hypothetical protein OsI_09055 [Oryza sativa Indica Group]
Match: gi|115448873|ref|NP_001048216.1| score: 140 e-value: 2e-31 Identity: 44.02% Span: 606bp (64.7%) Frame: 1
Os02g0764500 [Oryza sativa (japonica cultivar-group)] >gi46805727|dbj|BAD17114.1| putative light-harvesting chlorophy...
Match: gi|194704056|gb|ACF86112.1| score: 140 e-value: 2e-31 Identity: 44.21% Span: 540bp (57.7%) Frame: 1
unknown
Match: gi|551047|emb|CAA55864.1| score: 139 e-value: 3e-31 Identity: 38.89% Span: 732bp (78.2%) Frame: 1
type II LHCI [Lolium temulentum]
Match: gi|168060917|ref|XP_001782439.1| score: 139 e-value: 4e-31 Identity: 43.88% Span: 552bp (59.0%) Frame: 1
predicted
Match: gi|115479363|ref|NP_001063275.1| score: 139 e-value: 3e-31 Identity: 44.26% Span: 531bp (56.7%) Frame: 1
Os09g0439500 [Oryza sativa (japonica cultivar-group)] >gi51091350|dbj|BAD36085.1| putative chlorophyll a/b-binding pr...
Match: gi|218202214|gb|EEC84641.1| score: 138 e-value: 8e-31 Identity: 43.72% Span: 531bp (56.7%) Frame: 1
hypothetical protein OsI_31519 [Oryza sativa Indica Group]
Match: gi|40714521|dbj|BAD06924.1| score: 138 e-value: 8e-31 Identity: 41.94% Span: 618bp (66.0%) Frame: 1
gi|40714521|dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I [Chlamydomonas reinhardtii]
Match: gi|159467559|ref|XP_001691959.1| score: 138 e-value: 8e-31 Identity: 41.94% Span: 618bp (66.0%) Frame: 1
light-harvesting
Match: gi|27542569|gb|AAO16495.1| score: 138 e-value: 8e-31 Identity: 41.94% Span: 618bp (66.0%) Frame: 1
gi|27542569|gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Match: gi|15221956|ref|NP_173349.1| score: 136 e-value: 2e-30 Identity: 44.44% Span: 531bp (56.7%) Frame: 1
LHCA6; chlorophyll binding [Arabidopsis thaliana] >gi21554357|gb|AAM63464.1| PSI type II chlorophyll a/b-binding prot...
Match: gi|27754356|gb|AAO22627.1| score: 136 e-value: 2e-30 Identity: 44.44% Span: 531bp (56.7%) Frame: 1
putative light-harvesting chlorophyll a/b binding protein [Arabidopsis thaliana]
Match: gi|8954053|gb|AAF82226.1|AC069143_2 score: 136 e-value: 2e-30 Identity: 44.44% Span: 531bp (56.7%) Frame: 1
Contains similarity to a chlorophyll a/b-binding protein type II from Arabidopsis thaliana giS46295 and contains a ch...
Match: gi|115472983|ref|NP_001060090.1| score: 136 e-value: 3e-30 Identity: 37.07% Span: 747bp (79.8%) Frame: 1
Os07g0577600 [Oryza sativa (japonica cultivar-group)] >gi34393511|dbj|BAC83072.1| putative photosystem I antenna prot...
Match: gi|194704284|gb|ACF86226.1| score: 135 e-value: 5e-30 Identity: 43.48% Span: 591bp (63.1%) Frame: 1
unknown [Zea mays]
Match: gi|125583792|gb|EAZ24723.1| score: 135 e-value: 5e-30 Identity: 39.66% Span: 606bp (64.7%) Frame: 1
hypothetical
Match: gi|195616580|gb|ACG30120.1| score: 135 e-value: 5e-30 Identity: 43.48% Span: 591bp (63.1%) Frame: 1
chlorophyll
Match: gi|5902596|gb|AAD55568.1|AF110786_1 score: 135 e-value: 5e-30 Identity: 42.08% Span: 636bp (67.9%) Frame: 1
light harvesting complex a protein [Volvox carteri f. nagariensis]
Match: gi|20792|emb|CAA41406.1| score: 134 e-value: 1e-29 Identity: 39.35% Span: 612bp (65.4%) Frame: 1
Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Match: gi|157335508|emb|CAO61338.1| score: 134 e-value: 1e-29 Identity: 42.25% Span: 612bp (65.4%) Frame: 1
unnamed
Match: gi|168052237|ref|XP_001778557.1| score: 134 e-value: 8e-30 Identity: 43.5% Span: 513bp (54.8%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162670011|gb|EDQ56587.1| predicted protein [Physcomitrella...
Match: gi|168057356|ref|XP_001780681.1| score: 134 e-value: 8e-30 Identity: 42.72% Span: 585bp (62.5%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162667846|gb|EDQ54465.1| predicted protein [Physcomitrella...
Match: gi|666054|emb|CAA59049.1| score: 133 e-value: 2e-29 Identity: 40.19% Span: 603bp (64.4%) Frame: 1
LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp. vulgare]
Match: gi|159489490|ref|XP_001702730.1| score: 132 e-value: 3e-29 Identity: 40.65% Span: 627bp (67.0%) Frame: 1
light-harvesting
Match: gi|541565|gb|AAA57542.1| score: 132 e-value: 5e-29 Identity: 42.27% Span: 567bp (60.6%) Frame: 1
PSI type II chlorophyll a/b-binding protein [Arabidopsis thaliana]
Match: gi|15220077|ref|NP_175137.1| score: 132 e-value: 5e-29 Identity: 42.08% Span: 588bp (62.8%) Frame: 1
LHCA5; pigment binding [Arabidopsis thaliana] >gi30693978|ref|NP_849778.1| LHCA5; pigment binding [Arabidopsis thalia...
Match: gi|4741942|gb|AAD28768.1|AF134121_1 score: 131 e-value: 7e-29 Identity: 41.46% Span: 588bp (62.8%) Frame: 1
Lhca5 protein [Arabidopsis thaliana]
Match: gi|157358502|emb|CAO66169.1| score: 131 e-value: 7e-29 Identity: 39.72% Span: 609bp (65.1%) Frame: 1
unnamed
Match: gi|147841900|emb|CAN72005.1| score: 131 e-value: 7e-29 Identity: 39.72% Span: 609bp (65.1%) Frame: 1
hypothetical protein [Vitis vinifera]
Match: gi|124388816|gb|ABN10530.1| score: 131 e-value: 7e-29 Identity: 40.29% Span: 600bp (64.1%) Frame: 1
Lhca5 protein [Gentiana lutea]
Match: gi|21593722|gb|AAM65689.1| score: 131 e-value: 9e-29 Identity: 42.08% Span: 588bp (62.8%) Frame: 1
light-harvesting complex protein [Arabidopsis thaliana]
Match: gi|115766|sp|P13869|CB12_PETHY score: 131 e-value: 7e-29 Identity: 41.53% Span: 528bp (56.4%) Frame: 1
gi|115766|sp|P13869|CB12_PETHY Chlorophyll A-B binding protein, chloroplast precursor (LHCI type II CAB) gi|82243|pir...
Match: gi|18376587|emb|CAC81065.1| score: 130 e-value: 2e-28 Identity: 37.5% Span: 612bp (65.4%) Frame: 1
putative chlorophyll A-B binding protein of LHCI type II precursor [Picea abies]
Match: gi|212274977|ref|NP_001130616.1| score: 130 e-value: 2e-28 Identity: 40% Span: 603bp (64.4%) Frame: 1
hypothetical protein LOC100191715 [Zea mays] >gi195636368|gb|ACG37652.1| chlorophyll a-b binding protein [Zea mays]
Match: gi|87313217|gb|ABD37905.1| score: 130 e-value: 1e-28 Identity: 40.19% Span: 627bp (67.0%) Frame: 1
light-harvesting
Match: gi|195622990|gb|ACG33325.1| score: 130 e-value: 2e-28 Identity: 40% Span: 603bp (64.4%) Frame: 1
chlorophyll
Match: gi|116779438|gb|ABK21282.1| score: 130 e-value: 2e-28 Identity: 37.21% Span: 612bp (65.4%) Frame: 1
unknown [Picea sitchensis] >gi116782291|gb|ABK22450.1| unknown [Picea sitchensis] >gi|116784092|gb|ABK23211.1| unknow...
Match: gi|168011208|ref|XP_001758295.1| score: 129 e-value: 5e-28 Identity: 38.36% Span: 606bp (64.7%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162690330|gb|EDQ76697.1| predicted protein [Physcomitrella...
Match: gi|168068456|ref|XP_001786080.1| score: 129 e-value: 3e-28 Identity: 40% Span: 582bp (62.2%) Frame: 1
predicted
Match: gi|186511289|ref|NP_191706.2| score: 129 e-value: 3e-28 Identity: 42.08% Span: 528bp (56.4%) Frame: 1
LHCA2; chlorophyll binding [Arabidopsis thaliana] >gi4741940|gb|AAD28767.1|AF134120_1 Lhca2 protein [Arabidopsis thal...
Match: gi|74272669|gb|ABA01130.1| score: 129 e-value: 3e-28 Identity: 40.09% Span: 618bp (66.0%) Frame: 1
chloroplast
Match: gi|6850838|emb|CAB71077.1| score: 129 e-value: 3e-28 Identity: 42.08% Span: 528bp (56.4%) Frame: 1
Lhca2 protein [Arabidopsis thaliana]
Match: gi|118487538|gb|ABK95596.1| score: 129 e-value: 3e-28 Identity: 35.43% Span: 729bp (77.9%) Frame: 1
unknown [Populus trichocarpa]
Match: gi|195608716|gb|ACG26188.1| score: 129 e-value: 5e-28 Identity: 41.53% Span: 528bp (56.4%) Frame: 1
chlorophyll
Match: gi|168060921|ref|XP_001782441.1| score: 128 e-value: 8e-28 Identity: 39.59% Span: 570bp (60.9%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162666112|gb|EDQ52776.1| predicted protein [Physcomitrella...
Match: gi|149242541|pdb|2O01|2 score: 128 e-value: 6e-28 Identity: 39.34% Span: 528bp (56.4%) Frame: 1
Chain
Match: gi|602359|emb|CAA57492.1| score: 128 e-value: 6e-28 Identity: 39.34% Span: 528bp (56.4%) Frame: 1
Type II chlorophyll a/b binding protein from photosystem I [Pisum sativum]
Match: gi|118487549|gb|ABK95601.1| score: 127 e-value: 2e-27 Identity: 35.04% Span: 729bp (77.9%) Frame: 1
unknown [Populus trichocarpa]
Match: gi|145688411|gb|ABO71660.2| score: 127 e-value: 2e-27 Identity: 40.98% Span: 528bp (56.4%) Frame: 1
LhCa2 protein [Brassica juncea]
Match: gi|145079153|tpg|DAA05901.1| score: 127 e-value: 1e-27 Identity: 42.42% Span: 561bp (59.9%) Frame: 1
TPA:
Match: gi|311994|emb|CAA50763.1| score: 126 e-value: 3e-27 Identity: 37.87% Span: 639bp (68.3%) Frame: 1
gi|311994|emb|CAA50763.1| light harvesting complex I chlorophyll binding protein [Pyrobotrys stellata]
Match: gi|116779436|gb|ABK21281.1| score: 125 e-value: 4e-27 Identity: 31.85% Span: 750bp (80.1%) Frame: 1
unknown
Match: gi|115765|sp|P10708|CB12_SOLLC score: 125 e-value: 4e-27 Identity: 39.89% Span: 528bp (56.4%) Frame: 1
RecName:
Match: gi|168067076|ref|XP_001785452.1| score: 125 e-value: 4e-27 Identity: 35.8% Span: 612bp (65.4%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi168067086|ref|XP_001785457.1| predicted protein [Physcomit...
Match: gi|125605837|gb|EAZ44873.1| score: 124 e-value: 9e-27 Identity: 47.1% Span: 396bp (42.3%) Frame: 1
hypothetical
Match: gi|116790890|gb|ABK25779.1| score: 124 e-value: 1e-26 Identity: 31.53% Span: 750bp (80.1%) Frame: 1
unknown
Match: gi|116792229|gb|ABK26282.1| score: 124 e-value: 1e-26 Identity: 31.53% Span: 750bp (80.1%) Frame: 1
unknown
Match: gi|87313165|gb|ABD37879.1| score: 123 e-value: 2e-26 Identity: 39.27% Span: 636bp (67.9%) Frame: 1
light-harvesting
Match: gi|159476206|ref|XP_001696202.1| score: 123 e-value: 2e-26 Identity: 41.55% Span: 594bp (63.5%) Frame: 1
light-harvesting protein of photosystem I [Chlamydomonas reinhardtii] >gi40714515|dbj|BAD06921.1| light-harvesting ch...
Match: gi|145079606|tpg|DAA05920.1| score: 123 e-value: 2e-26 Identity: 39.27% Span: 636bp (67.9%) Frame: 1
TPA:
Match: gi|87313219|gb|ABD37906.1| score: 122 e-value: 3e-26 Identity: 41.55% Span: 594bp (63.5%) Frame: 1
light-harvesting chlorophyll-a/b binding protein Lhca4 [Chlamydomonas incerta]
Match: gi|168040609|ref|XP_001772786.1| score: 122 e-value: 3e-26 Identity: 34.63% Span: 612bp (65.4%) Frame: 1
predicted
Match: gi|159480898|ref|XP_001698519.1| score: 122 e-value: 6e-26 Identity: 40.57% Span: 606bp (64.7%) Frame: 1
light-harvesting
Match: gi|40714509|dbj|BAD06918.1| score: 122 e-value: 6e-26 Identity: 40.57% Span: 606bp (64.7%) Frame: 1
gi|40714509|dbj|BAD06918.1| light-harvesting chlorophyll-a/b protein of photosystem I [Chlamydomonas reinhardtii]
Match: gi|87313213|gb|ABD37903.1| score: 122 e-value: 6e-26 Identity: 40.57% Span: 606bp (64.7%) Frame: 1
light-harvesting
Match: gi|159479992|ref|XP_001698070.1| score: 120 e-value: 2e-25 Identity: 38.14% Span: 639bp (68.3%) Frame: 1
light-harvesting

163 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 26 hits recorded
Match: At1G15820.1 score: 410 e-value: 8e-115 Identity: 79.53% Span: 756bp (80.8%) Frame: 1
Symbols: CP24, LHCB6 | LHCB6 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding | chr1:5446680-5447671 REVERSE
Match: At1G19150.1 score: 136 e-value: 2e-32 Identity: 44.44% Span: 531bp (56.7%) Frame: 1
Symbols: LHCA2*1, LHCA6 | LHCA6 (Photosystem I light harvesting complex gene 6); chlorophyll binding | chr1:6612797-...
Match: At1G45474.1 score: 132 e-value: 4e-31 Identity: 42.08% Span: 588bp (62.8%) Frame: 1
Symbols: LHCA5 | LHCA5 (Photosystem I light harvesting complex gene 5) | chr1:17181793-17182879 FORWARD
Match: At1G45474.2 score: 132 e-value: 4e-31 Identity: 42.08% Span: 588bp (62.8%) Frame: 1
Symbols: LHCA5 | LHCA5 (Photosystem I light harvesting complex gene 5) | chr1:17181793-17182879 FORWARD
Match: At3G61470.1 score: 129 e-value: 2e-30 Identity: 42.08% Span: 528bp (56.4%) Frame: 1
Symbols: LHCA2 | LHCA2 (Photosystem I light harvesting complex gene 2); chlorophyll binding | chr3:22756711-22758007...
Match: At5G01530.1 score: 115 e-value: 3e-26 Identity: 34.45% Span: 558bp (59.6%) Frame: 1
chlorophyll A-B binding protein CP29 (LHCB4) | chr5:209083-210242 FORWARD
Match: At2G40100.1 score: 112 e-value: 2e-25 Identity: 31.61% Span: 762bp (81.4%) Frame: 1
Symbols: LHCB4.3 | LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding | chr2:16752962-16754268 FORWARD
Match: At3G08940.2 score: 110 e-value: 1e-24 Identity: 29.8% Span: 750bp (80.1%) Frame: 1
Symbols: LHCB4.2 | LHCB4.2 (LIGHT HARVESTING COMPLEX PSII) | chr3:2717722-2718670 FORWARD
Match: At3G47470.1 score: 108 e-value: 4e-24 Identity: 36.06% Span: 603bp (64.4%) Frame: 1
Symbols: CAB4, LHCA4 | LHCA4 (Photosystem I light harvesting complex gene 4); chlorophyll binding | chr3:17504607-17...
Match: At3G54890.1 score: 104 e-value: 7e-23 Identity: 41.3% Span: 519bp (55.4%) Frame: 1
Symbols: LHCA1 | LHCA1; chlorophyll binding | chr3:20350684-20351900 REVERSE
Match: At1G61520.1 score: 103 e-value: 2e-22 Identity: 34.21% Span: 600bp (64.1%) Frame: 1
Symbols: LHCA3 | LHCA3 (Photosystem I light harvesting complex gene 3); chlorophyll binding | chr1:22703817-22704814...
Match: At3G54890.4 score: 95.5 e-value: 4e-20 Identity: 40% Span: 492bp (52.6%) Frame: 1
Symbols: LHCA1 | LHCA1 | chr3:20350859-20351900 REVERSE
Match: At1G61520.2 score: 94.7 e-value: 7e-20 Identity: 33.86% Span: 510bp (54.5%) Frame: 1
Symbols: LHCA3 | LHCA3 (Photosystem I light harvesting complex gene 3) | chr1:22704158-22704814 FORWARD
Match: At5G54270.1 score: 93.2 e-value: 2e-19 Identity: 35.12% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB3*1, LHCB3 | LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) | chr5:22055650-22056609 FORWARD
Match: At2G34420.1 score: 85.9 e-value: 3e-17 Identity: 34.31% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB1.5, LHB1B2 | LHB1B2 (Photosystem II light harvesting complex gene 1.5); chlorophyll binding | chr2:145...
Match: At2G34430.1 score: 85.9 e-value: 3e-17 Identity: 34.31% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB1.4, LHB1B1 | LHB1B1 (Photosystem II light harvesting complex gene 1.4); chlorophyll binding | chr2:145...
Match: At1G29930.1 score: 85.1 e-value: 6e-17 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Symbols: AB140, CAB140, LHCB1.3, CAB1 | CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding | chr1:1047805...
Match: At1G29920.1 score: 85.1 e-value: 6e-17 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Symbols: CAB2, AB165, LHCB1.1 | CAB2 (Chlorophyll a/b-binding protein 2); chlorophyll binding | chr1:10475073-104758...
Match: At1G29910.1 score: 85.1 e-value: 6e-17 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472427-104732...
Match: At4G10340.1 score: 82.8 e-value: 3e-16 Identity: 32.47% Span: 531bp (56.7%) Frame: 1
Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408196-6409492 FO...
Match: At2G05100.1 score: 80.5 e-value: 1e-15 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB2.3, LHCB2.1 | LHCB2.1 (Photosystem II light harvesting complex gene 2.1); chlorophyll binding | chr2:1...
Match: At2G05070.1 score: 80.5 e-value: 1e-15 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB2.2 | LHCB2.2 (Photosystem II light harvesting complex gene 2.2); chlorophyll binding | chr2:1799433-18...
Match: At3G27690.1 score: 80.1 e-value: 2e-15 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Symbols: LHCB2.3, LHCB2:4 | LHCB2:4 (Photosystem II light harvesting complex gene 2.3); chlorophyll binding | chr3:1...
Match: At3G54890.2 score: 78.2 e-value: 7e-15 Identity: 53.57% Span: 228bp (24.4%) Frame: 1
Symbols: LHCA1 | LHCA1 | chr3:20350684-20351900 REVERSE
Match: At3G54890.3 score: 78.2 e-value: 7e-15 Identity: 53.57% Span: 228bp (24.4%) Frame: 1
Symbols: LHCA1 | LHCA1 | chr3:20350939-20351900 REVERSE
Match: At3G08940.1 score: 68.9 e-value: 4e-12 Identity: 27.42% Span: 429bp (45.8%) Frame: 1
Symbols: LHCB4.2 | LHCB4.2 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding | chr3:2717722-2718405 FORWARD

swissprot [blastx] Showing best 73 hits recorded
Match: P27524 score: 494 e-value: 4e-139 Identity: 100% Span: 768bp (82.1%) Frame: 1
Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1
Match: P27525 score: 455 e-value: 2e-127 Identity: 89.58% Span: 768bp (82.1%) Frame: 1
Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1
Match: P36494 score: 433 e-value: 6e-121 Identity: 81.4% Span: 765bp (81.7%) Frame: 1
Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1
Match: P13869 score: 131 e-value: 5e-30 Identity: 41.53% Span: 528bp (56.4%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1
Match: P10708 score: 125 e-value: 3e-28 Identity: 39.89% Span: 528bp (56.4%) Frame: 1
Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Match: Q07473 score: 115 e-value: 3e-25 Identity: 34.45% Span: 558bp (59.6%) Frame: 1
Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Match: Q9S7W1 score: 112 e-value: 2e-24 Identity: 31.61% Span: 762bp (81.4%) Frame: 1
Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1
Match: Q9SQL2 score: 111 e-value: 7e-24 Identity: 36.79% Span: 615bp (65.7%) Frame: 1
Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Match: Q9XF88 score: 110 e-value: 1e-23 Identity: 29.8% Span: 750bp (80.1%) Frame: 1
Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Match: P27521 score: 108 e-value: 3e-23 Identity: 36.06% Span: 603bp (64.4%) Frame: 1
14
Match: Q93WD2 score: 105 e-value: 3e-22 Identity: 33.99% Span: 600bp (64.1%) Frame: 1
Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
Match: P12360 score: 99.4 e-value: 3e-20 Identity: 40.22% Span: 519bp (55.4%) Frame: 1
Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Match: P27523 score: 97.4 e-value: 1e-19 Identity: 35.61% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Match: Q32904 score: 95.9 e-value: 3e-19 Identity: 34.72% Span: 522bp (55.8%) Frame: 1
Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1
Match: P27522 score: 92.8 e-value: 2e-18 Identity: 34.02% Span: 525bp (56.1%) Frame: 1
Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Match: P27489 score: 91.7 e-value: 5e-18 Identity: 34.15% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
Match: Q36718 score: 87.8 e-value: 8e-17 Identity: 31.73% Span: 612bp (65.4%) Frame: 1
Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Match: P27517 score: 87.4 e-value: 1e-16 Identity: 34.63% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1
Match: P27490 score: 85.9 e-value: 3e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1
Match: P92919 score: 85.9 e-value: 3e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1
Match: P07371 score: 85.9 e-value: 3e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
Match: P09756 score: 85.9 e-value: 3e-16 Identity: 34.31% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1
Match: P13851 score: 85.9 e-value: 3e-16 Identity: 34.8% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
Match: P12471 score: 85.5 e-value: 4e-16 Identity: 34.8% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1
Match: P04778 score: 85.1 e-value: 5e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
26
Match: P04777 score: 85.1 e-value: 5e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
21
Match: P12328 score: 84.7 e-value: 7e-16 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1
Match: P22686 score: 84.7 e-value: 7e-16 Identity: 32.2% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1
Match: P12331 score: 84.3 e-value: 9e-16 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2
Match: P08963 score: 84.3 e-value: 9e-16 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1
Match: P12330 score: 84 e-value: 1e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2
Match: P20866 score: 83.6 e-value: 1e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1
Match: P14279 score: 83.6 e-value: 1e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Match: P12329 score: 83.2 e-value: 2e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Match: P12062 score: 83.2 e-value: 2e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
Match: P27520 score: 83.2 e-value: 2e-15 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Match: P08221 score: 82.8 e-value: 2e-15 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Match: A2XJ35 score: 82.8 e-value: 2e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Match: Q9SDM1 score: 82.8 e-value: 2e-15 Identity: 32.07% Span: 519bp (55.4%) Frame: 1
Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Match: Q10HD0 score: 82.8 e-value: 2e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Match: P15195 score: 82.8 e-value: 2e-15 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Match: P12470 score: 82.8 e-value: 2e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1
Match: Q9XF89 score: 82.8 e-value: 2e-15 Identity: 32.47% Span: 531bp (56.7%) Frame: 1
17
Match: P12333 score: 82.8 e-value: 2e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1
Match: P27493 score: 82.8 e-value: 2e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
Match: P15194 score: 82.8 e-value: 2e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Match: P27495 score: 82.4 e-value: 3e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
Match: P07369 score: 82.4 e-value: 3e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Match: P07370 score: 82.4 e-value: 3e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
Match: P27491 score: 82.4 e-value: 3e-15 Identity: 32.85% Span: 561bp (59.9%) Frame: 1
Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
Match: P27492 score: 82.4 e-value: 3e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
Match: P06671 score: 82.4 e-value: 3e-15 Identity: 33.82% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1
Match: P04782 score: 82 e-value: 4e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
Match: P14278 score: 82 e-value: 4e-15 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Match: P15193 score: 82 e-value: 4e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Match: P14273 score: 82 e-value: 4e-15 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1
Match: P04159 score: 82 e-value: 4e-15 Identity: 34.31% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1
Match: P27494 score: 81.3 e-value: 7e-15 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
Match: P12469 score: 81.3 e-value: 7e-15 Identity: 33.33% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1
Match: P04781 score: 81.3 e-value: 7e-15 Identity: 34.31% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1
Match: P27518 score: 80.5 e-value: 1e-14 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Match: P27497 score: 80.5 e-value: 1e-14 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
Match: P27496 score: 80.5 e-value: 1e-14 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
Match: P08222 score: 80.5 e-value: 1e-14 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1
Match: P24006 score: 80.1 e-value: 2e-14 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1
Match: P04779 score: 79.3 e-value: 3e-14 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1
Match: P04783 score: 79.3 e-value: 3e-14 Identity: 32.84% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1
Match: P04780 score: 78.2 e-value: 6e-14 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1
Match: P04784 score: 77.8 e-value: 8e-14 Identity: 32.35% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Match: P15773 score: 77.4 e-value: 1e-13 Identity: 32.65% Span: 531bp (56.7%) Frame: 1
Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica
Match: P20865 score: 75.9 e-value: 3e-13 Identity: 31.14% Span: 612bp (65.4%) Frame: 1
Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1
Match: Q00827 score: 74.7 e-value: 7e-13 Identity: 30.88% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1
Match: P10049 score: 73.9 e-value: 1e-12 Identity: 31.86% Span: 552bp (59.0%) Frame: 1
Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1