| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|4033838|emb|CAA77213.1| |
score: 384.4 |
e-value: 2e-105 |
Identity: 81.05% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|4033838|emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] >gi|10178160|dbj|BAB11572.1| sigma-like factor [A... |
| Match: gi|30698518|dbj|BAC76607.1| |
score: 313.2 |
e-value: 6.8e-84 |
Identity: 64.03% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|30698518|dbj|BAC76607.1| plastid sigma factor SIG5 [Oryza sativa (japonica cultivar-group)] >gi|30698488|dbj|BAC76... |
| Match: gi|56603661|dbj|BAD80742.1| |
score: 203.8 |
e-value: 5.8e-51 |
Identity: 44.49% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|56603661|dbj|BAD80742.1| plastid sigma factor PpSIG5 [Physcomitrella patens] |
| Match: gi|28210583|ref|NP_781527.1| |
score: 136.3 |
e-value: 1.1e-30 |
Identity: 36.11% |
Span: 747bp (82.0%) |
Frame: 3 |
| gi|28210583|ref|NP_781527.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28203021|gb|AAO35464.1| RNA... |
| Match: gi|77954624|ref|ZP_00819015.1| |
score: 131 |
e-value: 4.8e-29 |
Identity: 30.3% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|77954624|ref|ZP_00819015.1| Sigma-70 factor [Marinobacter aquaeolei VT8] >gi|77866514|gb|EAO97806.1| Sigma-70 fact... |
| Match: gi|78702400|ref|ZP_00866837.1| |
score: 129 |
e-value: 1.8e-28 |
Identity: 29.92% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|78702400|ref|ZP_00866837.1| Sigma-70 factor [Alkalilimnicola ehrlichei MLHE-1] >gi|78520099|gb|EAP33369.1| Sigma-7... |
| Match: gi|35213141|dbj|BAC90513.1| |
score: 128.3 |
e-value: 3.1e-28 |
Identity: 35.48% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|35213141|dbj|BAC90513.1| principal RNA polymerase sigma factor [Gloeobacter violaceus PCC 7421] >gi|37522141|ref|N... |
| Match: gi|56416704|ref|YP_153778.1| |
score: 127.9 |
e-value: 4.1e-28 |
Identity: 34.65% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|56416704|ref|YP_153778.1| RNA polymerase sigma factor [Anaplasma marginale str. St. Maries] >gi|56387936|gb|AAV865... |
| Match: gi|77163592|ref|YP_342117.1| |
score: 127.5 |
e-value: 5.3e-28 |
Identity: 29.66% |
Span: 771bp (84.6%) |
Frame: 3 |
| gi|77163592|ref|YP_342117.1| RpoD [Nitrosococcus oceani ATCC 19707] >gi|76881906|gb|ABA56587.1| RpoD [Nitrosococcus o... |
| Match: gi|23128093|ref|ZP_00109949.1| |
score: 127.1 |
e-value: 7e-28 |
Identity: 35.89% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|23128093|ref|ZP_00109949.1| hypothetical protein [Nostoc punctiforme] gi|8118663|gb|AAF73062.1| primary vegetative... |
| Match: gi|1588486|prf||2208419B |
score: 127.1 |
e-value: 7e-28 |
Identity: 35.48% |
Span: 741bp (81.3%) |
Frame: 3 |
| RNA polymerase sigma factor |
| Match: gi|558881|gb|AAB41506.1| |
score: 127.1 |
e-value: 7e-28 |
Identity: 35.48% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] |
| Match: gi|75907632|ref|YP_321928.1| |
score: 126.7 |
e-value: 9.1e-28 |
Identity: 35.48% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|75907632|ref|YP_321928.1| Sigma 28 (Flagella/Sporulation) [Anabaena variabilis ATCC 29413] >gi|75701357|gb|ABA2103... |
| Match: gi|16332132|ref|NP_442860.1| |
score: 126.7 |
e-value: 9.1e-28 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|16332132|ref|NP_442860.1| RNA polymerase sigma factor [Synechocystis sp. PCC 6803] gi|7434770|pir||S76760 transcri... |
| Match: gi|67921267|ref|ZP_00514786.1| |
score: 126.7 |
e-value: 9.1e-28 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|67921267|ref|ZP_00514786.1| Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2 [Crocosphaer... |
| Match: gi|22294339|dbj|BAC08169.1| |
score: 126.3 |
e-value: 1.2e-27 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|22294339|dbj|BAC08169.1| principal RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] >gi|22298160|r... |
| Match: gi|68178483|ref|ZP_00551602.1| |
score: 125.9 |
e-value: 1.5e-27 |
Identity: 33.06% |
Span: 720bp (79.0%) |
Frame: 3 |
| gi|68178483|ref|ZP_00551602.1| Sigma-70 region 1.2 [Desulfuromonas acetoxidans DSM 684] >gi|67981443|gb|EAM70880.1| S... |
| Match: gi|1742976|emb|CAA67902.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 30.86% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|1742976|emb|CAA67902.1| primary sigma factor [Bradyrhizobium japonicum] >gi|27382460|ref|NP_773989.1| primary sigm... |
| Match: gi|217140|dbj|BAA01749.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.] |
| Match: gi|78698490|ref|ZP_00862992.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 30.86% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|78698490|ref|ZP_00862992.1| primary sigma factor [Bradyrhizobium sp. BTAi1] >gi|78513671|gb|EAP26980.1| primary si... |
| Match: gi|78496584|ref|ZP_00848786.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 30.86% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|78496584|ref|ZP_00848786.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|56750888|ref|YP_171589.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|56750888|ref|YP_171589.1| principal RNA polymerase sigma factor RpoD1 [Synechococcus elongatus PCC 6301] >gi|56685... |
| Match: gi|45511725|ref|ZP_00163292.1| |
score: 125.6 |
e-value: 2e-27 |
Identity: 34.68% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|45511725|ref|ZP_00163292.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Synechococcus e... |
| Match: gi|28493466|ref|NP_787627.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 35.6% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|28493466|ref|NP_787627.1| RNA polymerase sigma factor [Tropheryma whipplei str. Twist] gi|28476507|gb|AAO44596.1| ... |
| Match: gi|75676624|ref|YP_319045.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|75676624|ref|YP_319045.1| RpoD [Nitrobacter winogradskyi Nb-255] >gi|74421494|gb|ABA05693.1| RpoD [Nitrobacter win... |
| Match: gi|69926586|ref|ZP_00624057.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|69926586|ref|ZP_00624057.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|78489039|ref|ZP_00841290.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|78489039|ref|ZP_00841290.1| RNA polymerase sigma 70 subunit, RpoD [Rhodopseudomonas palustris HaA2] >gi|78381017|g... |
| Match: gi|68171251|ref|ZP_00544654.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 34.25% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|68171251|ref|ZP_00544654.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|77690478|ref|ZP_00805655.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|77690478|ref|ZP_00805655.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|77742950|ref|ZP_00811423.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|77742950|ref|ZP_00811423.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|42521867|ref|NP_967247.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 30.43% |
Span: 738bp (81.0%) |
Frame: 3 |
| gi|42521867|ref|NP_967247.1| RNA polymerase sigma factor RpoD [Bdellovibrio bacteriovorus HD100] >gi|39574397|emb|CAE... |
| Match: gi|39934363|ref|NP_946639.1| |
score: 125.2 |
e-value: 2.6e-27 |
Identity: 32.8% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|39934363|ref|NP_946639.1| RNA polymerase sigma 70 subunit, RpoD [Rhodopseudomonas palustris CGA009] >gi|39648212|e... |
| Match: gi|56544093|gb|AAV90247.1| |
score: 124.8 |
e-value: 3.5e-27 |
Identity: 31.62% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|56544093|gb|AAV90247.1| RNA polymerase sigma-70 factor [Zymomonas mobilis subsp. mobilis ZM4] >gi|56552519|ref|YP_... |
| Match: gi|1710685|sp|P52322|RPOD_MICAE |
score: 124.8 |
e-value: 3.5e-27 |
Identity: 35.12% |
Span: 723bp (79.4%) |
Frame: 3 |
| gi|1710685|sp|P52322|RPOD_MICAE RNA polymerase sigma factor rpoD1 >gi|2117922|pir||JC4952 transcription initiation fa... |
| Match: gi|28572422|ref|NP_789202.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 35.6% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|28572422|ref|NP_789202.1| RNA polymerase principal sigma factor hrdb [Tropheryma whipplei TW08/27] gi|28410553|emb... |
| Match: gi|28211633|ref|NP_782577.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 34.66% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|28211633|ref|NP_782577.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28204075|gb|AAO36514.1| RNA... |
| Match: gi|585928|sp|P38023|RPOD_SYNP7 |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 34.27% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|585928|sp|P38023|RPOD_SYNP7 RNA polymerase sigma factor rpoD1 |
| Match: gi|57239060|ref|YP_180196.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 34.25% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|57239060|ref|YP_180196.1| RNA polymerase sigma-70 factor [Ehrlichia ruminantium str. Welgevonden] >gi|58417629|emb... |
| Match: gi|46580198|ref|YP_011006.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 32.28% |
Span: 741bp (81.3%) |
Frame: 3 |
| gi|46580198|ref|YP_011006.1| RNA polymerase sigma-70 factor [Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroug... |
| Match: gi|39985125|gb|AAR36480.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 32.08% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|39985125|gb|AAR36480.1| RNA polymerase sigma factor RpoD [Geobacter sulfurreducens PCA] >gi|39998179|ref|NP_954130... |
| Match: gi|1405331|dbj|BAA11832.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 35.04% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|1405331|dbj|BAA11832.1| chloroplast RNA polymerase sigma subunit [Cyanidium caldarium] |
| Match: gi|27903957|gb|AAO26791.1| |
score: 124.4 |
e-value: 4.5e-27 |
Identity: 31.52% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|27903957|gb|AAO26791.1| RNA polymerase sigma factor RpoD [Buchnera aphidicola str. Bp (Baizongia pistaciae)] >gi|2... |
| Match: gi|73666941|ref|YP_302957.1| |
score: 124 |
e-value: 5.9e-27 |
Identity: 33.86% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|73666941|ref|YP_302957.1| RNA polymerase sigma factor rpoD [Ehrlichia canis str. Jake] >gi|72394082|gb|AAZ68359.1|... |
| Match: gi|19910024|dbj|BAB87263.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 34.22% |
Span: 747bp (82.0%) |
Frame: 3 |
| gi|19910024|dbj|BAB87263.1| RNA polymerase sigma factor [Cyanophora paradoxa] |
| Match: gi|78357095|ref|YP_388544.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 33.61% |
Span: 711bp (78.0%) |
Frame: 3 |
| gi|78357095|ref|YP_388544.1| Sigma-70 factor [Desulfovibrio desulfuricans G20] >gi|78219500|gb|ABB38849.1| Sigma-70 f... |
| Match: gi|77463967|ref|YP_353471.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 31.27% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|77463967|ref|YP_353471.1| RNA polymerase sigma factor RpoD [Rhodobacter sphaeroides 2.4.1] >gi|77388385|gb|ABA7957... |
| Match: gi|42526854|ref|NP_971952.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 32.17% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|42526854|ref|NP_971952.1| RNA polymerase sigma-70 factor family protein [Treponema denticola ATCC 35405] >gi|41817... |
| Match: gi|1173126|sp|P46400|RPOD_RHOCA |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 31.27% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|1173126|sp|P46400|RPOD_RHOCA RNA polymerase sigma factor rpoD (Sigma-70) >gi|881516|gb|AAA70413.1| RpoD |
| Match: gi|78221616|ref|YP_383363.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 31.64% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|78221616|ref|YP_383363.1| RNA polymerase sigma factor RpoD-like [Geobacter metallireducens GS-15] >gi|78192871|gb|... |
| Match: gi|56678364|gb|AAV95030.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 30.89% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|56678364|gb|AAV95030.1| RNA polymerase sigma-70 factor RpoD [Silicibacter pomeroyi DSS-3] >gi|56696627|ref|YP_1669... |
| Match: gi|152656|gb|AAA26473.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 30.77% |
Span: 720bp (79.0%) |
Frame: 3 |
| gi|152656|gb|AAA26473.1| sigma factor |
| Match: gi|69301727|ref|ZP_00622942.1| |
score: 123.6 |
e-value: 7.7e-27 |
Identity: 30.89% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|69301727|ref|ZP_00622942.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 reg... |
| Match: gi|67155379|ref|ZP_00417007.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|67155379|ref|ZP_00417007.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|68182541|ref|ZP_00555520.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 30.89% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|68182541|ref|ZP_00555520.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 reg... |
| Match: gi|53727220|ref|ZP_00141033.2| |
score: 123.2 |
e-value: 1e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|53727220|ref|ZP_00141033.2| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Pseudomonas aer... |
| Match: gi|13424691|gb|AAK25009.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 30.08% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|13424691|gb|AAK25009.1| RNA polymerase sigma factor RpoD [Caulobacter crescentus CB15] >gi|16127277|ref|NP_421841.... |
| Match: gi|1765926|emb|CAA70052.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 31.89% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|1765926|emb|CAA70052.1| RNA polymerase sigma-70 subunit [Rhizobium etli] |
| Match: gi|30060254|gb|AAP13091.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|30060254|gb|AAP13091.1| RpoD [Pseudomonas sp. M18] >gi|9946447|gb|AAG03965.1| sigma factor RpoD [Pseudomonas aerug... |
| Match: gi|71677077|ref|ZP_00674816.1| |
score: 123.2 |
e-value: 1e-26 |
Identity: 33.46% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|71677077|ref|ZP_00674816.1| Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2 [Trichodesmi... |
| Match: gi|133312|sp|P17531|RPOD_MYXXA |
score: 123.2 |
e-value: 1e-26 |
Identity: 30.77% |
Span: 720bp (79.0%) |
Frame: 3 |
| gi|133312|sp|P17531|RPOD_MYXXA RNA polymerase sigma factor rpoD (Sigma-80) >gi|710343|gb|AAB60208.1| major sigma fact... |
| Match: gi|78185245|ref|YP_377680.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 33.07% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|78185245|ref|YP_377680.1| Sigma-70 factor [Synechococcus sp. CC9902] >gi|78169539|gb|ABB26636.1| Sigma-70 factor [... |
| Match: gi|33639290|emb|CAE08298.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 33.07% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|33639290|emb|CAE08298.1| Putative principal RNA polymerase sigma factor [Synechococcus sp. WH 8102] >gi|33866315|r... |
| Match: gi|68189490|gb|EAN04156.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 32.02% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|68189490|gb|EAN04156.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region ... |
| Match: gi|71891846|ref|YP_277575.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 28.24% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|71891846|ref|YP_277575.1| RNA polymerase sigma-70 factor [Candidatus Blochmannia pennsylvanicus str. BPEN] >gi|717... |
| Match: gi|15075337|emb|CAC46893.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 32% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|15075337|emb|CAC46893.1| RNA POLYMERASE SIGMA FACTOR TRANSCRIPTION REGULATION PROTEIN [Sinorhizobium meliloti] >gi... |
| Match: gi|17936050|ref|NP_532840.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 32% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|17936050|ref|NP_532840.1| RNA polymerase sigma factor RpoD [Agrobacterium tumefaciens str. C58] >gi|17740633|gb|AA... |
| Match: gi|78212231|ref|YP_381010.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 33.07% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|78212231|ref|YP_381010.1| Sigma-70 factor [Synechococcus sp. CC9605] >gi|78196690|gb|ABB34455.1| Sigma-70 factor [... |
| Match: gi|1519634|gb|AAC44891.1| |
score: 122.9 |
e-value: 1.3e-26 |
Identity: 31.27% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|1519634|gb|AAC44891.1| sigma 70-type sigma factor SigA [Rhodobacter sphaeroides] |
| Match: gi|23013315|ref|ZP_00053224.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 33.33% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|23013315|ref|ZP_00053224.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Magnetospirillu... |
| Match: gi|62290370|ref|YP_222163.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 32.02% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|62290370|ref|YP_222163.1| RpoD, RNA polymerase sigma-70 factor [Brucella abortus biovar 1 str. 9-941] >gi|62196502... |
| Match: gi|23348329|gb|AAN30390.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 32.02% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|23348329|gb|AAN30390.1| RNA polymerase sigma-70 factor [Brucella suis 1330] >gi|23502348|ref|NP_698475.1| RNA poly... |
| Match: gi|72383665|ref|YP_293020.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 33.07% |
Span: 759bp (83.3%) |
Frame: 3 |
| gi|72383665|ref|YP_293020.1| sigma-70 factor [Prochlorococcus marinus str. NATL2A] >gi|72003515|gb|AAZ59317.1| sigma-... |
| Match: gi|50085952|ref|YP_047462.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 28.9% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|50085952|ref|YP_047462.1| sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential grow... |
| Match: gi|58038783|ref|YP_190747.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 33.75% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|58038783|ref|YP_190747.1| RNA polymerase sigma factor RpoD [Gluconobacter oxydans 621H] >gi|58001197|gb|AAW60091.1... |
| Match: gi|23008120|ref|ZP_00049697.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 32.41% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|23008120|ref|ZP_00049697.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Magnetospirillu... |
| Match: gi|54307643|ref|YP_128663.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 28.57% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|54307643|ref|YP_128663.1| putative DNA-directed RNA polymerase, sigmasubunit [Photobacterium profundum SS9] >gi|46... |
| Match: gi|69933458|ref|ZP_00628660.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 30.5% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|69933458|ref|ZP_00628660.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|76792340|ref|ZP_00774840.1| |
score: 122.5 |
e-value: 1.7e-26 |
Identity: 28.14% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|76792340|ref|ZP_00774840.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, no... |
| Match: gi|48765932|ref|ZP_00270482.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 32% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|48765932|ref|ZP_00270482.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Rhodospirillum ... |
| Match: gi|16272477|ref|NP_438691.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 29.8% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|16272477|ref|NP_438691.1| RNA polymerase sigma-70 factor [Haemophilus influenzae Rd] gi|1173125|sp|P43766|RPSD_HAE... |
| Match: gi|42630820|ref|ZP_00156359.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 29.8% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|42630820|ref|ZP_00156359.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Haemophilus inf... |
| Match: gi|520418|gb|AAA50747.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 31.37% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|520418|gb|AAA50747.1| major sigma factor |
| Match: gi|62148636|emb|CAH64409.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 31.37% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|62148636|emb|CAH64409.1| major sigma factor [Chlamydophila abortus S26/3] >gi|62185569|ref|YP_220354.1| major sigm... |
| Match: gi|53802939|ref|YP_115383.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 31.89% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|53802939|ref|YP_115383.1| RNA polymerase sigma-70 factor [Methylococcus capsulatus str. Bath] >gi|53756700|gb|AAU9... |
| Match: gi|29840756|ref|NP_829862.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 31.37% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|29840756|ref|NP_829862.1| RNA polymerase sigma factor, sigma-70 family [Chlamydophila caviae GPIC] gi|29835106|gb|... |
| Match: gi|68562100|ref|ZP_00601375.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 36.93% |
Span: 711bp (78.0%) |
Frame: 3 |
| gi|68562100|ref|ZP_00601375.1| Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2 [Rubrobacter... |
| Match: gi|68057329|gb|AAX87582.1| |
score: 122.1 |
e-value: 2.2e-26 |
Identity: 29.8% |
Span: 714bp (78.4%) |
Frame: 3 |
| gi|68057329|gb|AAX87582.1| RNA polymerase sigma factor RpoD [Haemophilus influenzae 86-028NP] >gi|68249130|ref|YP_248... |
| Match: gi|48848186|ref|ZP_00302432.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 31.6% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|48848186|ref|ZP_00302432.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Novosphingobium... |
| Match: gi|77920269|ref|YP_358084.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 32.23% |
Span: 720bp (79.0%) |
Frame: 3 |
| gi|77920269|ref|YP_358084.1| sigma 38 (RpoS) [Pelobacter carbinolicus DSM 2380] >gi|77546352|gb|ABA89914.1| sigma 38 ... |
| Match: gi|77461370|ref|YP_350877.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|77461370|ref|YP_350877.1| Sigma-70 (RpoD) [Pseudomonas fluorescens PfO-1] >gi|77385373|gb|ABA76886.1| Sigma-70 (Rp... |
| Match: gi|929808|emb|CAA59134.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|929808|emb|CAA59134.1| sigma 70 [Pseudomonas fluorescens] >gi|70732951|ref|YP_262722.1| RNA polymerase sigma facto... |
| Match: gi|13472238|ref|NP_103805.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 32.02% |
Span: 753bp (82.7%) |
Frame: 3 |
| gi|13472238|ref|NP_103805.1| RNA polymerase sigma subunit [Mesorhizobium loti MAFF303099] >gi|14022983|dbj|BAB49591.1... |
| Match: gi|13812120|ref|NP_113247.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 33.07% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|13812120|ref|NP_113247.1| RNA-polymerase sigma factor [Guillardia theta] gi|25288491|pir||D90084 RNA-polymerase si... |
| Match: gi|1912047|dbj|BAA19475.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 29.62% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|1912047|dbj|BAA19475.1| RNA polymerase sigma factor [Shewanella violacea] >gi|7388082|sp|O24744|RPOD_SHEVI RNA pol... |
| Match: gi|61101194|ref|ZP_00376651.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 31.6% |
Span: 744bp (81.7%) |
Frame: 3 |
| gi|61101194|ref|ZP_00376651.1| RNA polymerase sigma-70 factor [Erythrobacter litoralis HTCC2594] >gi|60737123|gb|EAL7... |
| Match: gi|20808174|ref|NP_623345.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 32.81% |
Span: 750bp (82.3%) |
Frame: 3 |
| gi|20808174|ref|NP_623345.1| DNA-directed RNA polymerase sigma subunits (sigma70/sigma32) [Thermoanaerobacter tengcon... |
| Match: gi|19910022|dbj|BAB87262.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 33.07% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta] |
| Match: gi|63258575|gb|AAY39671.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|63258575|gb|AAY39671.1| Sigma-70 region 1.1:Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70, non-es... |
| Match: gi|71736970|ref|YP_272918.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|71736970|ref|YP_272918.1| RNA polymerase sigma factor RpoD [Pseudomonas syringae pv. phaseolicola 1448A] >gi|71557... |
| Match: gi|28867765|ref|NP_790384.1| |
score: 121.7 |
e-value: 2.9e-26 |
Identity: 27.38% |
Span: 756bp (83.0%) |
Frame: 3 |
| gi|28867765|ref|NP_790384.1| RNA polymerase sigma-70 factor [Pseudomonas syringae pv. tomato str. DC3000] >gi|2885100... |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
