| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|38603878|gb|AAR24684.1| |
score: 183.3 |
e-value: 7.4e-45 |
Identity: 59.48% |
Span: 459bp (50.9%) |
Frame: 3 |
| gi|38603878|gb|AAR24684.1| At5g26880 [Arabidopsis thaliana] >gi|30690444|ref|NP_198040.2| tRNA/rRNA methyltransferase... |
| Match: gi|50947449|ref|XP_483252.1| |
score: 179.1 |
e-value: 1.4e-43 |
Identity: 59.35% |
Span: 465bp (51.6%) |
Frame: 3 |
| gi|50947449|ref|XP_483252.1| rRNA methylase-like [Oryza sativa (japonica cultivar-group)] >gi|42408928|dbj|BAD10185.1... |
| Match: gi|2191177|gb|AAB61063.1| |
score: 143.3 |
e-value: 8.5e-33 |
Identity: 69.39% |
Span: 294bp (32.6%) |
Frame: 3 |
| belongs to the SPOU family of rRNA methylases [Arabidopsis thaliana] |
| Match: gi|71675233|ref|ZP_00672978.1| |
score: 74.71 |
e-value: 3.7e-12 |
Identity: 35.66% |
Span: 387bp (42.9%) |
Frame: 3 |
| gi|71675233|ref|ZP_00672978.1| tRNA/rRNA methyltransferase (SpoU) [Trichodesmium erythraeum IMS101] >gi|71671349|gb|E... |
| Match: gi|75909401|ref|YP_323697.1| |
score: 74.71 |
e-value: 3.7e-12 |
Identity: 47.56% |
Span: 246bp (27.3%) |
Frame: 3 |
| RNA methyltransferase TrmH, group 2 [Anabaena variabilis ATCC 29413] >gi75703126|gb|ABA22802.1| RNA methyltransferase... |
| Match: gi|17132447|dbj|BAB75051.1| |
score: 74.33 |
e-value: 4.9e-12 |
Identity: 47.56% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|17132447|dbj|BAB75051.1| alr3352 [Nostoc sp. PCC 7120] >gi|25331712|pir||AI2224 hypothetical protein alr3352 [impo... |
| Match: gi|67923250|ref|ZP_00516736.1| |
score: 72.4 |
e-value: 1.8e-11 |
Identity: 48.19% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|67923250|ref|ZP_00516736.1| tRNA/rRNA methyltransferase (SpoU) [Crocosphaera watsonii WH 8501] >gi|67854927|gb|EAM... |
| Match: gi|23123774|ref|ZP_00105819.1| |
score: 71.25 |
e-value: 4.1e-11 |
Identity: 47.62% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|23123774|ref|ZP_00105819.1| COG0219: Predicted rRNA methylase (SpoU class) [Nostoc punctiforme] |
| Match: gi|56752229|ref|YP_172930.1| |
score: 70.86 |
e-value: 5.4e-11 |
Identity: 34.88% |
Span: 387bp (42.9%) |
Frame: 3 |
| gi|56752229|ref|YP_172930.1| probable tRNA/rRNA methyltransferase [Synechococcus elongatus PCC 6301] >gi|56687188|dbj... |
| Match: gi|37528643|ref|NP_931988.1| |
score: 69.71 |
e-value: 1.2e-10 |
Identity: 44.44% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|37528643|ref|NP_931988.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788082|emb|CA... |
| Match: gi|23468053|ref|ZP_00123624.1| |
score: 68.55 |
e-value: 2.7e-10 |
Identity: 46.34% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|23468053|ref|ZP_00123624.1| COG0219: Predicted rRNA methylase (SpoU class) [Haemophilus somnus 129PT] |
| Match: gi|75430019|ref|ZP_00732576.1| |
score: 68.55 |
e-value: 2.7e-10 |
Identity: 47.62% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|75430019|ref|ZP_00732576.1| tRNA/rRNA methyltransferase, putative [Actinobacillus succinogenes 130Z] >gi|74276735|... |
| Match: gi|52306273|gb|AAU36773.1| |
score: 68.55 |
e-value: 2.7e-10 |
Identity: 48.19% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|52306273|gb|AAU36773.1| CspR protein [Mannheimia succiniciproducens MBEL55E] >gi|52424221|ref|YP_087358.1| CspR pr... |
| Match: gi|53728708|ref|ZP_00131802.2| |
score: 68.17 |
e-value: 3.5e-10 |
Identity: 46.34% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|53728708|ref|ZP_00131802.2| COG0219: Predicted rRNA methylase (SpoU class) [Haemophilus somnus 2336] |
| Match: gi|16272707|ref|NP_438925.1| |
score: 67.4 |
e-value: 5.9e-10 |
Identity: 45.24% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|16272707|ref|NP_438925.1| rRNA methylase [Haemophilus influenzae Rd] gi|1176303|sp|P44868|YIBK_HAEIN Hypothetical ... |
| Match: gi|16131477|ref|NP_418063.1| |
score: 67.4 |
e-value: 5.9e-10 |
Identity: 46.07% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|16131477|ref|NP_418063.1| hypothetical protein [Escherichia coli K12] gi|26250250|ref|NP_756290.1| Hypothetical tR... |
| Match: gi|24054114|gb|AAN45092.1| |
score: 67.4 |
e-value: 5.9e-10 |
Identity: 46.07% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|24054114|gb|AAN45092.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] >gi|30065118|ref|NP_83... |
| Match: gi|75514325|ref|ZP_00736633.1| |
score: 67.4 |
e-value: 5.9e-10 |
Identity: 46.07% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|75514325|ref|ZP_00736633.1| COG0219: Predicted rRNA methylase (SpoU class) [Escherichia coli 53638] >gi|75197515|r... |
| Match: gi|68057561|gb|AAX87814.1| |
score: 67.01 |
e-value: 7.8e-10 |
Identity: 45.24% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|68057561|gb|AAX87814.1| conserved hypothetical tRNA/rRNA methyltransferase [Haemophilus influenzae 86-028NP] >gi|6... |
| Match: gi|78365962|ref|ZP_00836245.1| |
score: 66.63 |
e-value: 1e-09 |
Identity: 45.56% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|78365962|ref|ZP_00836245.1| RNA methyltransferase TrmH, group 2 [Shewanella sp. PV-4] >gi|78361863|gb|EAP03684.1| ... |
| Match: gi|24376005|ref|NP_720048.1| |
score: 66.24 |
e-value: 1.3e-09 |
Identity: 47.62% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|24376005|ref|NP_720048.1| RNA methyltransferase, TrmH family, group 2 [Shewanella oneidensis MR-1] gi|24351008|gb|... |
| Match: gi|15804150|ref|NP_290189.1| |
score: 66.24 |
e-value: 1.3e-09 |
Identity: 44.94% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|15804150|ref|NP_290189.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] gi|15833738|ref|NP_312511.1|... |
| Match: gi|56415585|ref|YP_152660.1| |
score: 66.24 |
e-value: 1.3e-09 |
Identity: 46.99% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|56415585|ref|YP_152660.1| putative RNA-methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A ... |
| Match: gi|46399657|emb|CAF23106.1| |
score: 65.85 |
e-value: 1.7e-09 |
Identity: 47.44% |
Span: 234bp (25.9%) |
Frame: 3 |
| gi|46399657|emb|CAF23106.1| conserved hypothetical protein [Parachlamydia sp. UWE25] >gi|46446016|ref|YP_007381.1| hy... |
| Match: gi|12721900|gb|AAK03597.1| |
score: 65.85 |
e-value: 1.7e-09 |
Identity: 46.99% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|12721900|gb|AAK03597.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] >gi|15603378|ref|NP_246452.1| h... |
| Match: gi|62182189|ref|YP_218606.1| |
score: 65.85 |
e-value: 1.7e-09 |
Identity: 46.99% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|62182189|ref|YP_218606.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica serovar Choler... |
| Match: gi|29144103|ref|NP_807445.1| |
score: 65.85 |
e-value: 1.7e-09 |
Identity: 46.99% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|29144103|ref|NP_807445.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica serovar Typhi Ty2] >... |
| Match: gi|16422261|gb|AAL22554.1| |
score: 65.85 |
e-value: 1.7e-09 |
Identity: 46.99% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|16422261|gb|AAL22554.1| putative tRNA/rRNA methyltransferase [Salmonella typhimurium LT2] >gi|16766980|ref|NP_4625... |
| Match: gi|22295519|dbj|BAC09345.1| |
score: 65.47 |
e-value: 2.3e-09 |
Identity: 43.75% |
Span: 240bp (26.6%) |
Frame: 3 |
| gi|22295519|dbj|BAC09345.1| SpoU rRNA Methylase family [Thermosynechococcus elongatus BP-1] >gi|22299336|ref|NP_68258... |
| Match: gi|78689188|ref|ZP_00853852.1| |
score: 65.08 |
e-value: 2.9e-09 |
Identity: 46.15% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|78689188|ref|ZP_00853852.1| RNA methyltransferase TrmH, group 2 [Shewanella sp. MR-7] >gi|78511345|gb|EAP24703.1| ... |
| Match: gi|54022887|ref|YP_117129.1| |
score: 65.08 |
e-value: 2.9e-09 |
Identity: 42.17% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|54022887|ref|YP_117129.1| putative ribosomal RNA methyltransferase [Nocardia farcinica IFM 10152] >gi|54014395|dbj... |
| Match: gi|77815534|ref|ZP_00814762.1| |
score: 65.08 |
e-value: 2.9e-09 |
Identity: 46.15% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|77815534|ref|ZP_00814762.1| RNA methyltransferase TrmH, group 2 [Shewanella putrefaciens CN-32] >gi|77809452|gb|EA... |
| Match: gi|78684391|ref|ZP_00849175.1| |
score: 64.7 |
e-value: 3.9e-09 |
Identity: 46.43% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|78684391|ref|ZP_00849175.1| RNA methyltransferase TrmH, group 2 [Shewanella sp. ANA-3] >gi|78507723|gb|EAP21232.1|... |
| Match: gi|62426254|ref|ZP_00381382.1| |
score: 64.7 |
e-value: 3.9e-09 |
Identity: 43.33% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|62426254|ref|ZP_00381382.1| COG0219: Predicted rRNA methylase (SpoU class) [Brevibacterium linens BL2] |
| Match: gi|42521894|ref|NP_967274.1| |
score: 64.31 |
e-value: 5e-09 |
Identity: 41.46% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|42521894|ref|NP_967274.1| rRNA methyltransferase [Bdellovibrio bacteriovorus HD100] >gi|39574424|emb|CAE77928.1| r... |
| Match: gi|77972957|ref|ZP_00828511.1| |
score: 64.31 |
e-value: 5e-09 |
Identity: 46.34% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|77972957|ref|ZP_00828511.1| COG0219: Predicted rRNA methylase (SpoU class) [Yersinia frederiksenii ATCC 33641] |
| Match: gi|67157556|ref|ZP_00418805.1| |
score: 64.31 |
e-value: 5e-09 |
Identity: 41.57% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|67157556|ref|ZP_00418805.1| RNA methyltransferase TrmH, group 2 [Azotobacter vinelandii AvOP] >gi|67085464|gb|EAM0... |
| Match: gi|78223582|ref|YP_385329.1| |
score: 63.54 |
e-value: 8.6e-09 |
Identity: 44.44% |
Span: 243bp (26.9%) |
Frame: 3 |
| gi|78223582|ref|YP_385329.1| tRNA/rRNA methyltransferase (SpoU) [Geobacter metallireducens GS-15] >gi|78194837|gb|ABB... |
| Match: gi|29654808|ref|NP_820500.1| |
score: 63.54 |
e-value: 8.6e-09 |
Identity: 43.18% |
Span: 264bp (29.3%) |
Frame: 3 |
| gi|29654808|ref|NP_820500.1| RNA methyltransferase, TrmH family, group 2 [Coxiella burnetii RSA 493] gi|29542076|gb|A... |
| Match: gi|28210123|ref|NP_781067.1| |
score: 63.54 |
e-value: 8.6e-09 |
Identity: 39.51% |
Span: 243bp (26.9%) |
Frame: 3 |
| gi|28210123|ref|NP_781067.1| rRNA methyltransferase [Clostridium tetani E88] gi|28202559|gb|AAO35004.1| rRNA methyltr... |
| Match: gi|78044914|ref|YP_359968.1| |
score: 63.54 |
e-value: 8.6e-09 |
Identity: 45.24% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|78044914|ref|YP_359968.1| RNA methyltransferase, TrmH family, group 2 [Carboxydothermus hydrogenoformans Z-2901] >... |
| Match: gi|22123992|ref|NP_667415.1| |
score: 63.16 |
e-value: 1.1e-08 |
Identity: 43.82% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|22123992|ref|NP_667415.1| hypothetical protein [Yersinia pestis KIM] gi|21956733|gb|AAM83666.1| hypothetical prote... |
| Match: gi|68545161|ref|ZP_00584712.1| |
score: 63.16 |
e-value: 1.1e-08 |
Identity: 44.58% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|68545161|ref|ZP_00584712.1| RNA methyltransferase TrmH, group 2 [Shewanella amazonensis SB2B] >gi|68517029|gb|EAN4... |
| Match: gi|68542874|ref|ZP_00582596.1| |
score: 63.16 |
e-value: 1.1e-08 |
Identity: 45.78% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|68542874|ref|ZP_00582596.1| RNA methyltransferase TrmH, group 2 [Shewanella baltica OS155] >gi|68519467|gb|EAN4300... |
| Match: gi|45434790|gb|AAS60351.1| |
score: 63.16 |
e-value: 1.1e-08 |
Identity: 43.82% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|45434790|gb|AAS60351.1| putative methyltransferase [Yersinia pestis biovar Medievalis str. 91001] >gi|77634051|ref... |
| Match: gi|46143316|ref|ZP_00135490.2| |
score: 62.77 |
e-value: 1.5e-08 |
Identity: 40.82% |
Span: 294bp (32.6%) |
Frame: 3 |
| gi|46143316|ref|ZP_00135490.2| COG0219: Predicted rRNA methylase (SpoU class) [Actinobacillus pleuropneumoniae serova... |
| Match: gi|50876821|emb|CAG36661.1| |
score: 62.39 |
e-value: 1.9e-08 |
Identity: 36.78% |
Span: 261bp (28.9%) |
Frame: 3 |
| gi|50876821|emb|CAG36661.1| probable rRNA methylase homolog (CspR) [Desulfotalea psychrophila LSv54] >gi|51245784|ref... |
| Match: gi|51594425|ref|YP_068616.1| |
score: 62.39 |
e-value: 1.9e-08 |
Identity: 43.82% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|51594425|ref|YP_068616.1| putative methyltransferase [Yersinia pseudotuberculosis IP 32953] >gi|51587707|emb|CAH19... |
| Match: gi|32044498|ref|ZP_00141599.1| |
score: 62.39 |
e-value: 1.9e-08 |
Identity: 40.45% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|32044498|ref|ZP_00141599.1| COG0219: Predicted rRNA methylase (SpoU class) [Pseudomonas aeruginosa UCBPP-PA14] |
| Match: gi|67674476|ref|ZP_00471236.1| |
score: 62.39 |
e-value: 1.9e-08 |
Identity: 43.43% |
Span: 282bp (31.3%) |
Frame: 3 |
| gi|67674476|ref|ZP_00471236.1| RNA methyltransferase TrmH, group 2 [Chromohalobacter salexigens DSM 3043] >gi|6752114... |
| Match: gi|66964567|ref|ZP_00412136.1| |
score: 62.39 |
e-value: 1.9e-08 |
Identity: 42.5% |
Span: 240bp (26.6%) |
Frame: 3 |
| gi|66964567|ref|ZP_00412136.1| tRNA/rRNA methyltransferase (SpoU) [Arthrobacter sp. FB24] >gi|66869331|gb|EAL96698.1|... |
| Match: gi|77977375|ref|ZP_00832825.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 45.12% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|77977375|ref|ZP_00832825.1| COG0219: Predicted rRNA methylase (SpoU class) [Yersinia intermedia ATCC 29909] |
| Match: gi|56461530|ref|YP_156811.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 46.07% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|56461530|ref|YP_156811.1| Predicted rRNA/tRNA methylase, SpoU family [Idiomarina loihiensis L2TR] >gi|56180540|gb|... |
| Match: gi|49080686|gb|AAT50047.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 40.45% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|49080686|gb|AAT50047.1| PA5127 [synthetic construct] |
| Match: gi|77960029|ref|ZP_00823929.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 45.12% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|77960029|ref|ZP_00823929.1| COG0219: Predicted rRNA methylase (SpoU class) [Yersinia mollaretii ATCC 43969] |
| Match: gi|77958480|ref|ZP_00822513.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 45.12% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|77958480|ref|ZP_00822513.1| COG0219: Predicted rRNA methylase (SpoU class) [Yersinia bercovieri ATCC 43970] |
| Match: gi|35211261|dbj|BAC88640.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 40.45% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|35211261|dbj|BAC88640.1| gll0699 [Gloeobacter violaceus PCC 7421] >gi|37520268|ref|NP_923645.1| probable tRNA/rRNA... |
| Match: gi|9951426|gb|AAG08512.1| |
score: 62 |
e-value: 2.5e-08 |
Identity: 40.45% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|9951426|gb|AAG08512.1| probable rRNA methylase [Pseudomonas aeruginosa PAO1] >gi|15600320|ref|NP_253814.1| probabl... |
| Match: gi|46200254|ref|YP_005921.1| |
score: 61.62 |
e-value: 3.3e-08 |
Identity: 46.25% |
Span: 240bp (26.6%) |
Frame: 3 |
| gi|46200254|ref|YP_005921.1| RNA methyltransferase, putative [Thermus thermophilus HB27] >gi|46197882|gb|AAS82294.1| ... |
| Match: gi|33151545|ref|NP_872898.1| |
score: 60.85 |
e-value: 5.6e-08 |
Identity: 40% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|33151545|ref|NP_872898.1| probable tRNA/rRNA methyltransferase [Haemophilus ducreyi 35000HP] gi|33147765|gb|AAP952... |
| Match: gi|37681300|ref|NP_935909.1| |
score: 60.85 |
e-value: 5.6e-08 |
Identity: 42.22% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|37681300|ref|NP_935909.1| predicted rRNA methylase [Vibrio vulnificus YJ016] >gi|27364652|ref|NP_760180.1| Predict... |
| Match: gi|34499838|ref|NP_904053.1| |
score: 60.46 |
e-value: 7.3e-08 |
Identity: 40.48% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|34499838|ref|NP_904053.1| probable RNA methyltransferase [Chromobacterium violaceum ATCC 12472] gi|34105688|gb|AAQ... |
| Match: gi|38233828|ref|NP_939595.1| |
score: 60.46 |
e-value: 7.3e-08 |
Identity: 40.7% |
Span: 258bp (28.6%) |
Frame: 3 |
| gi|38233828|ref|NP_939595.1| Putative tRNA/rRNA methyltransferase [Corynebacterium diphtheriae] gi|38200089|emb|CAE49... |
| Match: gi|69157159|gb|EAN69416.1| |
score: 60.46 |
e-value: 7.3e-08 |
Identity: 42.86% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|69157159|gb|EAN69416.1| RNA methyltransferase TrmH, group 2 [Shewanella denitrificans OS217] >gi|69944822|ref|ZP_0... |
| Match: gi|71546523|ref|ZP_00667313.1| |
score: 60.46 |
e-value: 7.3e-08 |
Identity: 39.18% |
Span: 276bp (30.6%) |
Frame: 3 |
| gi|71546523|ref|ZP_00667313.1| tRNA/rRNA methyltransferase (SpoU) [Syntrophobacter fumaroxidans MPOB] >gi|71487720|gb... |
| Match: gi|68268609|ref|ZP_00574879.1| |
score: 60.08 |
e-value: 9.5e-08 |
Identity: 46.15% |
Span: 234bp (25.9%) |
Frame: 3 |
| gi|68268609|ref|ZP_00574879.1| RNA methyltransferase TrmH, group 2 [Moorella thermoacetica ATCC 39073] >gi|68239087|g... |
| Match: gi|48860857|ref|ZP_00314765.1| |
score: 59.69 |
e-value: 1.2e-07 |
Identity: 40.45% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|48860857|ref|ZP_00314765.1| COG0219: Predicted rRNA methylase (SpoU class) [Microbulbifer degradans 2-40] |
| Match: gi|47573032|ref|ZP_00243072.1| |
score: 59.69 |
e-value: 1.2e-07 |
Identity: 41.38% |
Span: 261bp (28.9%) |
Frame: 3 |
| gi|47573032|ref|ZP_00243072.1| COG0219: Predicted rRNA methylase (SpoU class) [Rubrivivax gelatinosus PM1] |
| Match: gi|77456565|ref|YP_346070.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 40% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|77456565|ref|YP_346070.1| RNA methyltransferase TrmH, group 2 [Pseudomonas fluorescens PfO-1] >gi|77380568|gb|ABA7... |
| Match: gi|77359337|ref|YP_338912.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 39.76% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|77359337|ref|YP_338912.1| putative tRNA/rRNA methyltransferase [Pseudoalteromonas haloplanktis TAC125] >gi|7687424... |
| Match: gi|21425310|emb|CAC79245.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 46.84% |
Span: 237bp (26.3%) |
Frame: 3 |
| gi|21425310|emb|CAC79245.1| putative RNA methylase [Pseudomonas stutzeri] |
| Match: gi|71837236|ref|ZP_00677002.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 50% |
Span: 222bp (24.6%) |
Frame: 3 |
| gi|71837236|ref|ZP_00677002.1| tRNA/rRNA methyltransferase (SpoU) [Pelobacter propionicus DSM 2379] >gi|71742417|gb|E... |
| Match: gi|68264392|emb|CAI37880.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 42.35% |
Span: 255bp (28.3%) |
Frame: 3 |
| gi|68264392|emb|CAI37880.1| putative rRNA methylase, SpoU class [Corynebacterium jeikeium K411] >gi|68536793|ref|YP_2... |
| Match: gi|71737140|ref|YP_277002.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 41.86% |
Span: 258bp (28.6%) |
Frame: 3 |
| gi|71737140|ref|YP_277002.1| RNA methyltransferase, TrmH family, group 2 [Pseudomonas syringae pv. phaseolicola 1448A... |
| Match: gi|23465775|ref|NP_696378.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 36.26% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|23465775|ref|NP_696378.1| probable RNA methyltransferase [Bifidobacterium longum NCC2705] gi|23326465|gb|AAN25014.... |
| Match: gi|67659111|ref|ZP_00456477.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 42.17% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|67659111|ref|ZP_00456477.1| RNA methyltransferase TrmH, group 2 [Burkholderia cenocepacia AU 1054] >gi|67093337|gb... |
| Match: gi|71277929|ref|YP_271035.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 37.08% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|71277929|ref|YP_271035.1| RNA methyltransferase, TrmH family, group 2 [Colwellia psychrerythraea 34H] >gi|71143669... |
| Match: gi|46191126|ref|ZP_00206684.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 36.26% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|46191126|ref|ZP_00206684.1| COG0219: Predicted rRNA methylase (SpoU class) [Bifidobacterium longum DJO10A] |
| Match: gi|23492495|dbj|BAC17468.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 40.24% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|23492495|dbj|BAC17468.1| putative rRNA methylase [Corynebacterium efficiens YS-314] >gi|25027214|ref|NP_737268.1| ... |
| Match: gi|67667333|ref|ZP_00464559.1| |
score: 58.92 |
e-value: 2.1e-07 |
Identity: 42.17% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|67667333|ref|ZP_00464559.1| RNA methyltransferase TrmH, group 2 [Burkholderia cenocepacia HI2424] >gi|67099099|gb|... |
| Match: gi|15023579|gb|AAK78677.1| |
score: 58.54 |
e-value: 2.8e-07 |
Identity: 38.27% |
Span: 243bp (26.9%) |
Frame: 3 |
| gi|15023579|gb|AAK78677.1| Predicted tRNA-methylase (SpoU class) [Clostridium acetobutylicum ATCC 824] >gi|15893988|r... |
| Match: gi|78067649|ref|YP_370418.1| |
score: 58.54 |
e-value: 2.8e-07 |
Identity: 42.17% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|78067649|ref|YP_370418.1| RNA methyltransferase TrmH, group 2 [Burkholderia sp. 383] >gi|77968394|gb|ABB09774.1| R... |
| Match: gi|28872435|ref|NP_795054.1| |
score: 58.54 |
e-value: 2.8e-07 |
Identity: 41.86% |
Span: 258bp (28.6%) |
Frame: 3 |
| gi|28872435|ref|NP_795054.1| RNA methyltransferase, TrmH family, group 2 [Pseudomonas syringae pv. tomato str. DC3000... |
| Match: gi|70733879|ref|YP_257519.1| |
score: 58.54 |
e-value: 2.8e-07 |
Identity: 38.89% |
Span: 270bp (29.9%) |
Frame: 3 |
| gi|70733879|ref|YP_257519.1| RNA methyltransferase, TrmH family, group 2 [Pseudomonas fluorescens Pf-5] >gi|68348178|... |
| Match: gi|31794549|ref|NP_857042.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 40.91% |
Span: 264bp (29.3%) |
Frame: 3 |
| gi|31794549|ref|NP_857042.1| PROBABLE tRNA/rRNA METHYLASE SPOU (tRNA/rRNA METHYLTRANSFERASE) [Mycobacterium bovis AF2... |
| Match: gi|77952029|ref|ZP_00816447.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 36% |
Span: 285bp (31.6%) |
Frame: 3 |
| gi|77952029|ref|ZP_00816447.1| RNA methyltransferase TrmH, group 2 [Marinobacter aquaeolei VT8] >gi|77869193|gb|EAP00... |
| Match: gi|76793687|ref|ZP_00776170.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 39.76% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|76793687|ref|ZP_00776170.1| RNA methyltransferase TrmH, group 2 [Pseudoalteromonas atlantica T6c] >gi|76591005|gb|... |
| Match: gi|77166275|ref|YP_344800.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 37.76% |
Span: 294bp (32.6%) |
Frame: 3 |
| gi|77166275|ref|YP_344800.1| RNA methyltransferase TrmH, group 2 [Nitrosococcus oceani ATCC 19707] >gi|76884589|gb|AB... |
| Match: gi|32444058|emb|CAD73500.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 43.68% |
Span: 261bp (28.9%) |
Frame: 3 |
| gi|32444058|emb|CAD73500.1| spoU rRNA Methylase family [Rhodopirellula baltica SH 1] >gi|32472821|ref|NP_865815.1| sp... |
| Match: gi|66781717|gb|EAL82684.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 41.18% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|66781717|gb|EAL82684.1| tRNA/rRNA methyltransferase (SpoU) [Deinococcus geothermalis DSM 11300] >gi|66798008|ref|Z... |
| Match: gi|18144973|dbj|BAB81017.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 31.09% |
Span: 357bp (39.6%) |
Frame: 3 |
| gi|18144973|dbj|BAB81017.1| conserved hypothetical protein [Clostridium perfringens str. 13] >gi|18310293|ref|NP_5622... |
| Match: gi|48786448|ref|ZP_00282582.1| |
score: 58.15 |
e-value: 3.6e-07 |
Identity: 40.96% |
Span: 249bp (27.6%) |
Frame: 3 |
| gi|48786448|ref|ZP_00282582.1| COG0219: Predicted rRNA methylase (SpoU class) [Burkholderia fungorum LB400] |
| Match: gi|29377148|ref|NP_816302.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 36.84% |
Span: 279bp (30.9%) |
Frame: 3 |
| gi|29377148|ref|NP_816302.1| RNA methyltransferase, TrmH family [Enterococcus faecalis V583] gi|29344614|gb|AAO82372.... |
| Match: gi|56475995|ref|YP_157584.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 42.7% |
Span: 267bp (29.6%) |
Frame: 3 |
| gi|56475995|ref|YP_157584.1| RNA methyltransferase CspR (SpoU class) [Azoarcus sp. EbN1] >gi|56312038|emb|CAI06683.1|... |
| Match: gi|53803355|ref|YP_114950.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 39.56% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|53803355|ref|YP_114950.1| RNA methyltransferase, TrmH family, group 2 [Methylococcus capsulatus str. Bath] >gi|537... |
| Match: gi|63258812|gb|AAY39908.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 40.7% |
Span: 258bp (28.6%) |
Frame: 3 |
| gi|63258812|gb|AAY39908.1| RNA methyltransferase TrmH, group 2 [Pseudomonas syringae pv. syringae B728a] >gi|66048105... |
| Match: gi|45658771|ref|YP_002857.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 45.05% |
Span: 273bp (30.3%) |
Frame: 3 |
| gi|45658771|ref|YP_002857.1| tRNA/rRNA methyltransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-... |
| Match: gi|73540016|ref|YP_294536.1| |
score: 57.77 |
e-value: 4.7e-07 |
Identity: 41.67% |
Span: 252bp (27.9%) |
Frame: 3 |
| gi|73540016|ref|YP_294536.1| RNA methyltransferase TrmH, group 2 [Ralstonia eutropha JMP134] >gi|72117429|gb|AAZ59692... |
| Match: gi|77686215|ref|ZP_00801578.1| |
score: 57.38 |
e-value: 6.1e-07 |
Identity: 37.89% |
Span: 279bp (30.9%) |
Frame: 3 |
| gi|77686215|ref|ZP_00801578.1| tRNA/rRNA methyltransferase (SpoU) [Alkaliphilus metalliredigenes QYMF] >gi|77637973|g... |
| Match: gi|41409572|ref|NP_962408.1| |
score: 57.38 |
e-value: 6.1e-07 |
Identity: 43.9% |
Span: 246bp (27.3%) |
Frame: 3 |
| gi|41409572|ref|NP_962408.1| SpoU [Mycobacterium avium subsp. paratuberculosis K-10] >gi|41398403|gb|AAS06024.1| SpoU... |
|
| 35 lower scoring hits censored -- only 100 best hits are stored. |
