| genbank/nr [blastx] | Showing best 45 hits recorded |
| Match: gi|157336609|emb|CAO71294.1| |
score: 280 |
e-value: 1e-73 |
Identity: 71.27% |
Span: 543bp (62.1%) |
Frame: 2 |
| unnamed |
| Match: gi|147822056|emb|CAN61549.1| |
score: 279 |
e-value: 2e-73 |
Identity: 72.73% |
Span: 528bp (60.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|118487294|gb|ABK95475.1| |
score: 275 |
e-value: 4e-72 |
Identity: 73.3% |
Span: 528bp (60.3%) |
Frame: 2 |
| unknown [Populus trichocarpa] |
| Match: gi|42566796|ref|NP_193202.2| |
score: 267 |
e-value: 7e-70 |
Identity: 68.36% |
Span: 531bp (60.7%) |
Frame: 2 |
| NRPE7; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi149944323|gb|ABR46204.1| At4g14660 [Arabidopsis thaliana] |
| Match: gi|2244822|emb|CAB10245.1| |
score: 241 |
e-value: 4e-62 |
Identity: 68.12% |
Span: 480bp (54.9%) |
Frame: 2 |
| RNA polymerase II fifth largest subunit like protein [Arabidopsis thaliana] >gi7268172|emb|CAB78508.1| RNA polymerase... |
| Match: gi|18403570|ref|NP_566719.1| |
score: 205 |
e-value: 3e-51 |
Identity: 56.32% |
Span: 522bp (59.7%) |
Frame: 2 |
| NRPD7; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21553765|gb|AAM62858.1| RNA polymerase II fifth largest ... |
| Match: gi|115462207|ref|NP_001054703.1| |
score: 203 |
e-value: 2e-50 |
Identity: 55.43% |
Span: 525bp (60.0%) |
Frame: 2 |
| Os05g0157100 [Oryza sativa (japonica cultivar-group)] >gi45267865|gb|AAS55764.1| putative RNA polymerase II [Oryza sa... |
| Match: gi|57863806|gb|AAS98454.2| |
score: 189 |
e-value: 3e-46 |
Identity: 54.49% |
Span: 501bp (57.3%) |
Frame: 2 |
| putative receptor kinase [Oryza sativa Japonica Group] |
| Match: gi|11994719|dbj|BAB03035.1| |
score: 186 |
e-value: 1e-45 |
Identity: 57.52% |
Span: 459bp (52.5%) |
Frame: 2 |
| RNA polymerase II fifth largest subunit-like protein [Arabidopsis thaliana] |
| Match: gi|125551315|gb|EAY97024.1| |
score: 171 |
e-value: 5e-41 |
Identity: 56.46% |
Span: 441bp (50.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|115462713|ref|NP_001054956.1| |
score: 171 |
e-value: 5e-41 |
Identity: 56.46% |
Span: 441bp (50.4%) |
Frame: 2 |
| Os05g0224700 [Oryza sativa (japonica cultivar-group)] >gi113578507|dbj|BAF16870.1| Os05g0224700 [Oryza sativa Japonic... |
| Match: gi|30682881|ref|NP_193188.2| |
score: 99.4 |
e-value: 3e-19 |
Identity: 34.72% |
Span: 528bp (60.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II-related [Arabidopsis thaliana] >gi30682886|ref|NP_849385.1| DNA-directed RNA polymeras... |
| Match: gi|168006688|ref|XP_001756041.1| |
score: 98.6 |
e-value: 5e-19 |
Identity: 32.58% |
Span: 525bp (60.0%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162692971|gb|EDQ79326.1| predicted protein [Physcomitrella... |
| Match: gi|2244808|emb|CAB10231.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 35.87% |
Span: 501bp (57.3%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] >gi7268158|emb|CAB78494.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|125552265|gb|EAY97974.1| |
score: 89 |
e-value: 4e-16 |
Identity: 33.33% |
Span: 465bp (53.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|115463767|ref|NP_001055483.1| |
score: 89 |
e-value: 4e-16 |
Identity: 33.33% |
Span: 465bp (53.1%) |
Frame: 2 |
| Os05g0400700 [Oryza sativa (japonica cultivar-group)] >gi50878367|gb|AAT85142.1| putative RNA polymerase II subunit 5... |
| Match: gi|1173137|sp|P46279|RPB7_SOYBN |
score: 88.6 |
e-value: 6e-16 |
Identity: 33.97% |
Span: 465bp (53.1%) |
Frame: 2 |
| gi|1173137|sp|P46279|RPB7_SOYBN DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE (RNA POLYMERASE II SUBUNIT 5) gi|322... |
| Match: gi|147841138|emb|CAN75204.1| |
score: 88.2 |
e-value: 7e-16 |
Identity: 32.69% |
Span: 465bp (53.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|168056096|ref|XP_001780058.1| |
score: 86.3 |
e-value: 3e-15 |
Identity: 34.19% |
Span: 462bp (52.8%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162668556|gb|EDQ55161.1| predicted protein [Physcomitrella... |
| Match: gi|15237831|ref|NP_200726.1| |
score: 84 |
e-value: 1e-14 |
Identity: 32.69% |
Span: 465bp (53.1%) |
Frame: 2 |
| NRPB7; DNA-directed RNA polymerase/ RNA binding [Arabidopsis thaliana] >gi585917|sp|P38421.1|RPB7_ARATH RecName: Full... |
| Match: gi|58266678|ref|XP_570495.1| |
score: 80.9 |
e-value: 1e-13 |
Identity: 34.42% |
Span: 462bp (52.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|109105730|ref|XP_001116154.1| |
score: 79.3 |
e-value: 3e-13 |
Identity: 30.16% |
Span: 531bp (60.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|156543535|ref|XP_001602888.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 35.34% |
Span: 393bp (44.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|114638047|ref|XP_001142605.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 35.04% |
Span: 402bp (45.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|149725343|ref|XP_001495008.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 35.04% |
Span: 402bp (45.9%) |
Frame: 2 |
| PREDICTED: similar to DNA directed RNA polymerase II polypeptide G [Equus caballus] |
| Match: gi|4505947|ref|NP_002687.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 35.04% |
Span: 402bp (45.9%) |
Frame: 2 |
| gi|4505947|ref|NP_002687.1| DNA directed RNA polymerase II polypeptide G; DNA directed RNA polymerase II 19 kda polyp... |
| Match: gi|156378584|ref|XP_001631222.1| |
score: 78.2 |
e-value: 7e-13 |
Identity: 36.43% |
Span: 381bp (43.5%) |
Frame: 2 |
| predicted |
| Match: gi|24647020|ref|NP_731983.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 36.03% |
Span: 402bp (45.9%) |
Frame: 2 |
| Rpb7 [Drosophila melanogaster] >gi195328827|ref|XP_002031113.1| GM25797 [Drosophila sechellia] >gi|195570746|ref|XP_0... |
| Match: gi|41054447|ref|NP_955963.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 33.82% |
Span: 402bp (45.9%) |
Frame: 2 |
| gi|41054447|ref|NP_955963.1| polymerase (RNA) II (DNA directed) polypeptide G [Danio rerio] gi|28278826|gb|AAH45299.1... |
| Match: gi|126333619|ref|XP_001362540.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 33.82% |
Span: 402bp (45.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|134110566|ref|XP_776110.1| |
score: 77.4 |
e-value: 1e-12 |
Identity: 33.77% |
Span: 462bp (52.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|72013666|ref|XP_780458.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 34.56% |
Span: 402bp (45.9%) |
Frame: 2 |
| PREDICTED: similar to Polymerase (RNA) II (DNA directed) polypeptide G-like [Strongylocentrotus purpuratus] >gi115911... |
| Match: gi|125777779|ref|XP_001359725.1| |
score: 76.3 |
e-value: 3e-12 |
Identity: 36.09% |
Span: 393bp (44.9%) |
Frame: 2 |
| GA16051 [Drosophila pseudoobscura pseudoobscura] >gi194767707|ref|XP_001965956.1| GF11824 [Drosophila ananassae] >gi|... |
| Match: gi|169846764|ref|XP_001830096.1| |
score: 75.9 |
e-value: 4e-12 |
Identity: 36.92% |
Span: 387bp (44.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|66540556|ref|XP_624976.1| |
score: 75.5 |
e-value: 5e-12 |
Identity: 34.59% |
Span: 393bp (44.9%) |
Frame: 2 |
| gi|66540556|ref|XP_624976.1| PREDICTED: similar to GA16051-PA, partial [Apis mellifera] |
| Match: gi|73586691|gb|AAI03081.1| |
score: 75.5 |
e-value: 5e-12 |
Identity: 34.85% |
Span: 387bp (44.2%) |
Frame: 2 |
| gi|73586691|gb|AAI03081.1| Polymerase (RNA) II (DNA directed) polypeptide G [Bos taurus] |
| Match: gi|159467891|ref|XP_001692125.1| |
score: 75.1 |
e-value: 6e-12 |
Identity: 28.65% |
Span: 495bp (56.6%) |
Frame: 2 |
| DNA-directed |
| Match: gi|193893716|gb|EDV92582.1| |
score: 75.1 |
e-value: 6e-12 |
Identity: 36.09% |
Span: 393bp (44.9%) |
Frame: 2 |
| GH18755 |
| Match: gi|190584006|gb|EDV24076.1| |
score: 74.7 |
e-value: 8e-12 |
Identity: 35.61% |
Span: 390bp (44.6%) |
Frame: 2 |
| hypothetical |
| Match: gi|91082423|ref|XP_970313.1| |
score: 74.3 |
e-value: 1e-11 |
Identity: 35.29% |
Span: 402bp (45.9%) |
Frame: 2 |
| PREDICTED: similar to GA16051-PA [Tribolium castaneum] >gi270007516|gb|EFA03964.1| hypothetical protein TcasGA2_TC014... |
| Match: gi|170030019|ref|XP_001842888.1| |
score: 74.3 |
e-value: 1e-11 |
Identity: 35.34% |
Span: 393bp (44.9%) |
Frame: 2 |
| DNA-directed RNA polymerase II 19 kDa polypeptide [Culex quinquefasciatus] >gi167865348|gb|EDS28731.1| DNA-directed R... |
| Match: gi|17510349|ref|NP_491093.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 31.82% |
Span: 456bp (52.1%) |
Frame: 2 |
| gi|17510349|ref|NP_491093.1| polymerase II (1D600) [Caenorhabditis elegans] gi|7323534|gb|AAF59550.1| Hypothetical pr... |
| Match: gi|170106467|ref|XP_001884445.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 36.15% |
Span: 387bp (44.2%) |
Frame: 2 |
| predicted |
| Match: gi|157746383|ref|XP_001668287.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 31.82% |
Span: 456bp (52.1%) |
Frame: 2 |
| Hypothetical |
| Match: gi|164657466|ref|XP_001729859.1| |
score: 71.2 |
e-value: 9e-11 |
Identity: 30.13% |
Span: 468bp (53.5%) |
Frame: 2 |
| hypothetical |
|
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At4G14660.1 |
score: 267 |
e-value: 5e-72 |
Identity: 68.36% |
Span: 531bp (60.7%) |
Frame: 2 |
| RNA polymerase Rpb7 N-terminal domain-containing protein | chr4:8406495-8407031 REVERSE |
| Match: At3G22900.1 |
score: 205 |
e-value: 3e-53 |
Identity: 56.32% |
Span: 522bp (59.7%) |
Frame: 2 |
| RNA polymerase Rpb7 N-terminal domain-containing protein | chr3:8115652-8116176 FORWARD |
| Match: At4G14520.2 |
score: 99.4 |
e-value: 3e-21 |
Identity: 34.72% |
Span: 528bp (60.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II-related | chr4:8342467-8343069 FORWARD |
| Match: At4G14520.1 |
score: 99.4 |
e-value: 3e-21 |
Identity: 34.72% |
Span: 528bp (60.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II-related | chr4:8342467-8343069 FORWARD |
| Match: At5G59180.1 |
score: 84 |
e-value: 1e-16 |
Identity: 32.69% |
Span: 465bp (53.1%) |
Frame: 2 |
| DNA-directed RNA polymerase II | chr5:23900725-23902202 FORWARD |
|
