| genbank/nr [blastx] | Showing best 96 hits recorded |
| Match: gi|66841323|dbj|BAD99219.1| |
score: 214 |
e-value: 7e-54 |
Identity: 44.18% |
Span: 744bp (85.4%) |
Frame: 1 |
| polypeptide with a gag-like domain [Petunia x hybrida] |
| Match: gi|147795862|emb|CAN74230.1| |
score: 159 |
e-value: 3e-37 |
Identity: 39.57% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147783627|emb|CAN68148.1| |
score: 152 |
e-value: 3e-35 |
Identity: 35.86% |
Span: 702bp (80.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147857574|emb|CAN81001.1| |
score: 149 |
e-value: 3e-34 |
Identity: 38.39% |
Span: 669bp (76.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147804937|emb|CAN60374.1| |
score: 149 |
e-value: 2e-34 |
Identity: 36.19% |
Span: 792bp (90.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147781338|emb|CAN62906.1| |
score: 148 |
e-value: 5e-34 |
Identity: 38.25% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147774245|emb|CAN61417.1| |
score: 146 |
e-value: 2e-33 |
Identity: 36.29% |
Span: 699bp (80.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147801872|emb|CAN63908.1| |
score: 145 |
e-value: 5e-33 |
Identity: 35.86% |
Span: 702bp (80.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147816002|emb|CAN65808.1| |
score: 144 |
e-value: 7e-33 |
Identity: 35.59% |
Span: 699bp (80.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147774435|emb|CAN59949.1| |
score: 141 |
e-value: 6e-32 |
Identity: 35.06% |
Span: 684bp (78.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147805214|emb|CAN66627.1| |
score: 140 |
e-value: 1e-31 |
Identity: 36.8% |
Span: 684bp (78.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147796443|emb|CAN74819.1| |
score: 140 |
e-value: 2e-31 |
Identity: 33.91% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147858105|emb|CAN81016.1| |
score: 139 |
e-value: 3e-31 |
Identity: 36.24% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|4263646|gb|AAD15368.1| |
score: 138 |
e-value: 7e-31 |
Identity: 33.88% |
Span: 723bp (83.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] >gi17065314|gb|AAL32811.1| putative retroelement pol pol... |
| Match: gi|7767664|gb|AAF69161.1|AC007915_13 |
score: 132 |
e-value: 4e-29 |
Identity: 34.8% |
Span: 675bp (77.5%) |
Frame: 1 |
| F27F5.19 [Arabidopsis thaliana] |
| Match: gi|9758772|dbj|BAB09070.1| |
score: 130 |
e-value: 1e-28 |
Identity: 31.86% |
Span: 675bp (77.5%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] >gi26450382|dbj|BAC42306.1| putative retroelement pol polyprotein [Ara... |
| Match: gi|147788164|emb|CAN71595.1| |
score: 129 |
e-value: 4e-28 |
Identity: 33.64% |
Span: 645bp (74.1%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147833118|emb|CAN64225.1| |
score: 129 |
e-value: 2e-28 |
Identity: 30.67% |
Span: 666bp (76.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147769782|emb|CAN65540.1| |
score: 128 |
e-value: 5e-28 |
Identity: 30.22% |
Span: 666bp (76.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|2245104|emb|CAB10526.1| |
score: 128 |
e-value: 7e-28 |
Identity: 32.14% |
Span: 720bp (82.7%) |
Frame: 1 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268497|emb|CAB78748.1| retrotransposon like protein [Arabidop... |
| Match: gi|4539372|emb|CAB40066.1| |
score: 126 |
e-value: 3e-27 |
Identity: 30.13% |
Span: 678bp (77.8%) |
Frame: 1 |
| putative |
| Match: gi|110737688|dbj|BAF00783.1| |
score: 125 |
e-value: 4e-27 |
Identity: 32.17% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|2244802|emb|CAB10225.1| |
score: 125 |
e-value: 3e-27 |
Identity: 31.49% |
Span: 690bp (79.2%) |
Frame: 1 |
| retrovirus-related |
| Match: gi|4678197|gb|AAD26943.1| |
score: 125 |
e-value: 4e-27 |
Identity: 33.8% |
Span: 636bp (73.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|3513747|gb|AAC33963.1| |
score: 124 |
e-value: 8e-27 |
Identity: 30.84% |
Span: 633bp (72.7%) |
Frame: 1 |
| gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis th... |
| Match: gi|2462935|emb|CAA72989.1| |
score: 124 |
e-value: 1e-26 |
Identity: 31.96% |
Span: 654bp (75.1%) |
Frame: 1 |
| unnamed protein product [Brassica oleracea var. acephala] |
| Match: gi|10177143|dbj|BAB10503.1| |
score: 124 |
e-value: 1e-26 |
Identity: 29.65% |
Span: 675bp (77.5%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|7267643|emb|CAB78071.1| |
score: 123 |
e-value: 2e-26 |
Identity: 29.91% |
Span: 663bp (76.1%) |
Frame: 1 |
| putative |
| Match: gi|9989054|gb|AAG10817.1|AC011808_5 |
score: 121 |
e-value: 6e-26 |
Identity: 32.35% |
Span: 705bp (80.9%) |
Frame: 1 |
| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|87240899|gb|ABD32757.1| |
score: 121 |
e-value: 8e-26 |
Identity: 31.6% |
Span: 627bp (72.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|4206207|gb|AAD11595.1| |
score: 118 |
e-value: 7e-25 |
Identity: 31.17% |
Span: 690bp (79.2%) |
Frame: 1 |
| putative reverse transcriptase [Arabidopsis thaliana] >gi4263040|gb|AAD15309.1| putative reverse transcriptase [Arabi... |
| Match: gi|147766660|emb|CAN67322.1| |
score: 117 |
e-value: 9e-25 |
Identity: 35.83% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|4586028|gb|AAD25646.1| |
score: 117 |
e-value: 1e-24 |
Identity: 32.71% |
Span: 639bp (73.4%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|158578602|gb|ABW74573.1| |
score: 115 |
e-value: 4e-24 |
Identity: 31.65% |
Span: 651bp (74.7%) |
Frame: 1 |
| putative pol polyprotein [Boechera divaricarpa] |
| Match: gi|157347714|emb|CAO22170.1| |
score: 115 |
e-value: 4e-24 |
Identity: 31.78% |
Span: 702bp (80.6%) |
Frame: 1 |
| unnamed |
| Match: gi|147773401|emb|CAN73437.1| |
score: 114 |
e-value: 1e-23 |
Identity: 35.57% |
Span: 573bp (65.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147833069|emb|CAN75292.1| |
score: 114 |
e-value: 1e-23 |
Identity: 33.77% |
Span: 684bp (78.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147791344|emb|CAN66054.1| |
score: 112 |
e-value: 3e-23 |
Identity: 38.51% |
Span: 435bp (49.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157327744|emb|CAO16171.1| |
score: 111 |
e-value: 7e-23 |
Identity: 30.93% |
Span: 702bp (80.6%) |
Frame: 1 |
| unnamed |
| Match: gi|111183162|gb|ABH07899.1| |
score: 110 |
e-value: 2e-22 |
Identity: 30.56% |
Span: 642bp (73.7%) |
Frame: 1 |
| putative polyprotein [Solanum lycopersicum] |
| Match: gi|8778880|gb|AAF79879.1|AC000348_32 |
score: 109 |
e-value: 3e-22 |
Identity: 30.42% |
Span: 714bp (82.0%) |
Frame: 1 |
| T7N9.5 |
| Match: gi|124359649|gb|ABD32334.2| |
score: 109 |
e-value: 3e-22 |
Identity: 27.44% |
Span: 636bp (73.0%) |
Frame: 1 |
| Polynucleotidyl |
| Match: gi|147804686|emb|CAN69190.1| |
score: 105 |
e-value: 5e-21 |
Identity: 29.95% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147778633|emb|CAN76111.1| |
score: 101 |
e-value: 9e-20 |
Identity: 35.56% |
Span: 531bp (61.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147778858|emb|CAN73696.1| |
score: 100 |
e-value: 2e-19 |
Identity: 29.95% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147822046|emb|CAN65820.1| |
score: 99.8 |
e-value: 3e-19 |
Identity: 30.14% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147780359|emb|CAN59936.1| |
score: 99 |
e-value: 4e-19 |
Identity: 26.22% |
Span: 666bp (76.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|9758329|dbj|BAB08885.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 28.84% |
Span: 636bp (73.0%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|5306241|gb|AAD41974.1| |
score: 96.7 |
e-value: 2e-18 |
Identity: 30.92% |
Span: 621bp (71.3%) |
Frame: 1 |
| putative |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 95.5 |
e-value: 5e-18 |
Identity: 27.36% |
Span: 627bp (72.0%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|147801255|emb|CAN74847.1| |
score: 94.7 |
e-value: 8e-18 |
Identity: 29.49% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147819068|emb|CAN65182.1| |
score: 94 |
e-value: 1e-17 |
Identity: 34.81% |
Span: 474bp (54.4%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147819437|emb|CAN64502.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 29.03% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|3779026|gb|AAC67205.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 27.36% |
Span: 627bp (72.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|2194136|gb|AAB61111.1| |
score: 92.8 |
e-value: 3e-17 |
Identity: 28.78% |
Span: 612bp (70.3%) |
Frame: 1 |
| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gbU12626) [Arabidopsis thaliana] |
| Match: gi|4388829|gb|AAD19784.1| |
score: 89.4 |
e-value: 4e-16 |
Identity: 25.54% |
Span: 684bp (78.5%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|113205377|gb|AAU93584.2| |
score: 88.6 |
e-value: 6e-16 |
Identity: 29.8% |
Span: 591bp (67.9%) |
Frame: 1 |
| Polyprotein, putative [Solanum demissum] |
| Match: gi|12322504|gb|AAG51258.1|AC025782_3 |
score: 88.6 |
e-value: 6e-16 |
Identity: 27.83% |
Span: 663bp (76.1%) |
Frame: 1 |
| Ty1/copia-element polyprotein [Arabidopsis thaliana] |
| Match: gi|147777318|emb|CAN71573.1| |
score: 87.8 |
e-value: 1e-15 |
Identity: 25% |
Span: 750bp (86.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|8777581|dbj|BAA97099.1| |
score: 87.8 |
e-value: 1e-15 |
Identity: 27.19% |
Span: 675bp (77.5%) |
Frame: 1 |
| gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|147863169|emb|CAN80919.1| |
score: 87.8 |
e-value: 1e-15 |
Identity: 27.27% |
Span: 642bp (73.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147809827|emb|CAN73765.1| |
score: 87 |
e-value: 2e-15 |
Identity: 25.73% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|3695393|gb|AAC62795.1| |
score: 87 |
e-value: 2e-15 |
Identity: 27.4% |
Span: 654bp (75.1%) |
Frame: 1 |
| gi|3695393|gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam: rvp.hmm, score: 11.80) [Arabido... |
| Match: gi|5306246|gb|AAD41979.1| |
score: 86.7 |
e-value: 2e-15 |
Identity: 26.91% |
Span: 669bp (76.8%) |
Frame: 1 |
| gi|5306246|gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147771338|emb|CAN65095.1| |
score: 85.9 |
e-value: 4e-15 |
Identity: 25.31% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147818359|emb|CAN62623.1| |
score: 85.9 |
e-value: 4e-15 |
Identity: 25.31% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147816137|emb|CAN62065.1| |
score: 84.7 |
e-value: 9e-15 |
Identity: 30.9% |
Span: 531bp (61.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|4587602|gb|AAD25830.1| |
score: 84.7 |
e-value: 9e-15 |
Identity: 35.81% |
Span: 444bp (51.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147816075|emb|CAN66087.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 25.31% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147801115|emb|CAN75466.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 24.9% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|40644190|emb|CAC95126.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 29.13% |
Span: 669bp (76.8%) |
Frame: 1 |
| gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] |
| Match: gi|147844168|emb|CAN80566.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 24.48% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147843452|emb|CAN82073.1| |
score: 82 |
e-value: 6e-14 |
Identity: 30.66% |
Span: 630bp (72.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147768962|emb|CAN73624.1| |
score: 81.6 |
e-value: 7e-14 |
Identity: 24.9% |
Span: 711bp (81.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147805915|emb|CAN76546.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 30.38% |
Span: 453bp (52.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147794669|emb|CAN78026.1| |
score: 80.9 |
e-value: 1e-13 |
Identity: 28.04% |
Span: 639bp (73.4%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|2642431|gb|AAB87099.1| |
score: 80.9 |
e-value: 1e-13 |
Identity: 27.56% |
Span: 660bp (75.8%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147766544|emb|CAN65229.1| |
score: 80.5 |
e-value: 2e-13 |
Identity: 27.54% |
Span: 702bp (80.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|50253554|gb|AAT71979.1| |
score: 80.1 |
e-value: 2e-13 |
Identity: 25.51% |
Span: 723bp (83.0%) |
Frame: 1 |
| At5g39185 [Arabidopsis thaliana] |
| Match: gi|147809553|emb|CAN71207.1| |
score: 80.1 |
e-value: 2e-13 |
Identity: 25.37% |
Span: 606bp (69.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|10177558|dbj|BAB10837.1| |
score: 79.7 |
e-value: 3e-13 |
Identity: 26.32% |
Span: 678bp (77.8%) |
Frame: 1 |
| retroelement |
| Match: gi|147806431|emb|CAN67620.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 25.56% |
Span: 663bp (76.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|46518391|gb|AAS99677.1| |
score: 78.2 |
e-value: 8e-13 |
Identity: 26.34% |
Span: 657bp (75.4%) |
Frame: 1 |
| gi|46518391|gb|AAS99677.1| At1g21220 [Arabidopsis thaliana] >gi|48310400|gb|AAT41813.1| At1g21220 [Arabidopsis thalia... |
| Match: gi|147771937|emb|CAN75698.1| |
score: 78.2 |
e-value: 8e-13 |
Identity: 23.61% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|147787640|emb|CAN60829.1| |
score: 77.4 |
e-value: 1e-12 |
Identity: 35.51% |
Span: 402bp (46.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|147843692|emb|CAN79868.1| |
score: 77 |
e-value: 2e-12 |
Identity: 32.62% |
Span: 417bp (47.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|4325355|gb|AAD17352.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 28.66% |
Span: 465bp (53.4%) |
Frame: 1 |
| contains similarity to retrovirus-related polyproteins [Arabidopsis thaliana] >gi7267379|emb|CAB77940.1| putative pol... |
| Match: gi|147861359|emb|CAN83990.1| |
score: 75.9 |
e-value: 4e-12 |
Identity: 35.51% |
Span: 318bp (36.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|114053447|gb|AAT40537.2| |
score: 75.5 |
e-value: 5e-12 |
Identity: 37.93% |
Span: 261bp (30.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|147795320|emb|CAN67245.1| |
score: 75.5 |
e-value: 5e-12 |
Identity: 24.77% |
Span: 630bp (72.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|147792973|emb|CAN73102.1| |
score: 75.1 |
e-value: 7e-12 |
Identity: 24.64% |
Span: 609bp (69.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|9954746|gb|AAG09097.1|AC009323_8 |
score: 74.7 |
e-value: 9e-12 |
Identity: 24.67% |
Span: 675bp (77.5%) |
Frame: 1 |
| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|52354133|gb|AAU44387.1| |
score: 74.7 |
e-value: 9e-12 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|15218961|ref|NP_173550.1| |
score: 74.3 |
e-value: 1e-11 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| gi|15218961|ref|NP_173550.1| hypothetical protein [Arabidopsis thaliana] gi|28393025|gb|AAO41947.1| unknown protein [... |
| Match: gi|147772735|emb|CAN60627.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 24.15% |
Span: 609bp (69.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|147806117|emb|CAN67762.1| |
score: 71.2 |
e-value: 1e-10 |
Identity: 31.72% |
Span: 426bp (48.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1G21280.1 |
score: 74.3 |
e-value: 9e-14 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43940.1); similar to Integrase, catalytic re (GB:ABE8561... |
|
| swissprot [blastx] | Showing best 0 hits recorded |
|
