| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G21280.1 |
score: 74.3 |
e-value: 1e-13 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43940.1); similar to Integrase, catalytic re (GB:ABE8561... |
| Match: At1G34070.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 20.81% |
Span: 600bp (68.9%) |
Frame: 1 |
| | Symbol: None | expressed protein | chr1:12402261-12403187 FORWARD | Aliases: F12G12.10, F12G12_10 |
|
| 2 lower scoring hits censored -- only 2 best hits are stored. |
| genbank/nr [blastx] | Showing best 91 hits recorded |
| Match: gi|53689715|gb|AAU89730.1| |
score: 323 |
e-value: 7e-87 |
Identity: 58.39% |
Span: 852bp (97.8%) |
Frame: 1 |
| gi|53689715|gb|AAU89730.1| putative polyprotein [Solanum tuberosum] |
| Match: gi|66841323|dbj|BAD99219.1| |
score: 217 |
e-value: 7e-55 |
Identity: 43.18% |
Span: 789bp (90.6%) |
Frame: 1 |
| polypeptide with a gag-like domain [Petunia x hybrida] |
| Match: gi|21387147|gb|AAM47977.1| |
score: 142 |
e-value: 2e-32 |
Identity: 33.73% |
Span: 762bp (87.5%) |
Frame: 1 |
| gi|21387147|gb|AAM47977.1| putative retroelement pol polyprotein [Arabidopsis thaliana] >gi|4263646|gb|AAD15368.1| pu... |
| Match: gi|7767664|gb|AAF69161.1| |
score: 134 |
e-value: 6e-30 |
Identity: 34.13% |
Span: 750bp (86.1%) |
Frame: 1 |
| gi|7767664|gb|AAF69161.1| F27F5.19 [Arabidopsis thaliana] |
| Match: gi|26450382|dbj|BAC42306.1| |
score: 130 |
e-value: 1e-28 |
Identity: 31.86% |
Span: 675bp (77.5%) |
Frame: 1 |
| gi|26450382|dbj|BAC42306.1| putative retroelement pol polyprotein [Arabidopsis thaliana] >gi|9758772|dbj|BAB09070.1| ... |
| Match: gi|2245104|emb|CAB10526.1| |
score: 129 |
e-value: 2e-28 |
Identity: 33.21% |
Span: 792bp (90.9%) |
Frame: 1 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268497|emb|CAB78748.1| retrotransposon like protein [Arabidop... |
| Match: gi|92879596|gb|ABE85615.1| |
score: 129 |
e-value: 2e-28 |
Identity: 29.06% |
Span: 786bp (90.2%) |
Frame: 1 |
| Integrase, |
| Match: gi|7267796|emb|CAB81199.1| |
score: 127 |
e-value: 7e-28 |
Identity: 28.46% |
Span: 771bp (88.5%) |
Frame: 1 |
| putative |
| Match: gi|2244802|emb|CAB10225.1| |
score: 125 |
e-value: 3e-27 |
Identity: 31.49% |
Span: 690bp (79.2%) |
Frame: 1 |
| retrovirus-related |
| Match: gi|92870292|gb|ABE79611.1| |
score: 125 |
e-value: 5e-27 |
Identity: 29.02% |
Span: 756bp (86.8%) |
Frame: 1 |
| Integrase, |
| Match: gi|53689713|gb|AAU89728.1| |
score: 125 |
e-value: 5e-27 |
Identity: 31.08% |
Span: 747bp (85.8%) |
Frame: 1 |
| gi|53689713|gb|AAU89728.1| putative retroelement pol polyprotein-like [Solanum tuberosum] |
| Match: gi|4678197|gb|AAD26943.1| |
score: 125 |
e-value: 3e-27 |
Identity: 33.8% |
Span: 636bp (73.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|110737688|dbj|BAF00783.1| |
score: 125 |
e-value: 3e-27 |
Identity: 32.17% |
Span: 687bp (78.9%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|92868184|gb|ABE78266.1| |
score: 124 |
e-value: 8e-27 |
Identity: 30.91% |
Span: 651bp (74.7%) |
Frame: 1 |
| Integrase, |
| Match: gi|3513747|gb|AAC33963.1| |
score: 124 |
e-value: 6e-27 |
Identity: 30.84% |
Span: 633bp (72.7%) |
Frame: 1 |
| gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis th... |
| Match: gi|2462935|emb|CAA72989.1| |
score: 124 |
e-value: 1e-26 |
Identity: 31.96% |
Span: 654bp (75.1%) |
Frame: 1 |
| unnamed protein product [Brassica oleracea var. acephala] |
| Match: gi|7267643|emb|CAB78071.1| |
score: 123 |
e-value: 2e-26 |
Identity: 29.91% |
Span: 663bp (76.1%) |
Frame: 1 |
| putative |
| Match: gi|87162538|gb|ABD28333.1| |
score: 122 |
e-value: 3e-26 |
Identity: 29.27% |
Span: 732bp (84.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|9989054|gb|AAG10817.1| |
score: 121 |
e-value: 5e-26 |
Identity: 32.35% |
Span: 705bp (80.9%) |
Frame: 1 |
| gi|9989054|gb|AAG10817.1| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|87240899|gb|ABD32757.1| |
score: 121 |
e-value: 7e-26 |
Identity: 31.6% |
Span: 627bp (72.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|4263040|gb|AAD15309.1| |
score: 120 |
e-value: 1e-25 |
Identity: 30.3% |
Span: 789bp (90.6%) |
Frame: 1 |
| putative |
| Match: gi|92867829|gb|ABE77963.1| |
score: 119 |
e-value: 3e-25 |
Identity: 34.51% |
Span: 669bp (76.8%) |
Frame: 1 |
| probable |
| Match: gi|92876199|gb|ABE83919.1| |
score: 117 |
e-value: 1e-24 |
Identity: 28.64% |
Span: 651bp (74.7%) |
Frame: 1 |
| Zinc |
| Match: gi|92867056|gb|ABE77479.1| |
score: 117 |
e-value: 1e-24 |
Identity: 25.18% |
Span: 837bp (96.1%) |
Frame: 1 |
| Integrase, |
| Match: gi|4586028|gb|AAD25646.1| |
score: 117 |
e-value: 1e-24 |
Identity: 32.71% |
Span: 639bp (73.4%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|92877036|gb|ABE84270.1| |
score: 117 |
e-value: 1e-24 |
Identity: 31.63% |
Span: 636bp (73.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|92885710|gb|ABE87898.1| |
score: 115 |
e-value: 3e-24 |
Identity: 28.03% |
Span: 783bp (89.9%) |
Frame: 1 |
| Polynucleotidyl |
| Match: gi|92872938|gb|ABE81467.1| |
score: 115 |
e-value: 4e-24 |
Identity: 26.91% |
Span: 771bp (88.5%) |
Frame: 1 |
| Integrase, |
| Match: gi|92869833|gb|ABE79323.1| |
score: 114 |
e-value: 8e-24 |
Identity: 29.3% |
Span: 636bp (73.0%) |
Frame: 1 |
| Retrotransposon |
| Match: gi|8778880|gb|AAF79879.1| |
score: 113 |
e-value: 2e-23 |
Identity: 29.82% |
Span: 849bp (97.5%) |
Frame: 1 |
| gi|8778880|gb|AAF79879.1| T7N9.5 [Arabidopsis thaliana] |
| Match: gi|92872328|gb|ABE81001.1| |
score: 112 |
e-value: 2e-23 |
Identity: 28.33% |
Span: 831bp (95.4%) |
Frame: 1 |
| Retrotransposon |
| Match: gi|111183162|gb|ABH07899.1| |
score: 110 |
e-value: 2e-22 |
Identity: 30.56% |
Span: 642bp (73.7%) |
Frame: 1 |
| putative polyprotein [Solanum lycopersicum] |
| Match: gi|92895963|gb|ABE92971.1| |
score: 109 |
e-value: 2e-22 |
Identity: 27.44% |
Span: 636bp (73.0%) |
Frame: 1 |
| probable |
| Match: gi|87240476|gb|ABD32334.1| |
score: 109 |
e-value: 2e-22 |
Identity: 27.44% |
Span: 636bp (73.0%) |
Frame: 1 |
| conserved |
| Match: gi|92886481|gb|ABE88348.1| |
score: 108 |
e-value: 6e-22 |
Identity: 28.69% |
Span: 714bp (82.0%) |
Frame: 1 |
| Zinc |
| Match: gi|92879385|gb|ABE85514.1| |
score: 107 |
e-value: 8e-22 |
Identity: 29.66% |
Span: 777bp (89.2%) |
Frame: 1 |
| putative |
| Match: gi|92867943|gb|ABE78054.1| |
score: 107 |
e-value: 8e-22 |
Identity: 26.1% |
Span: 720bp (82.7%) |
Frame: 1 |
| TonB |
| Match: gi|92895366|gb|ABE92682.1| |
score: 104 |
e-value: 6e-21 |
Identity: 26.16% |
Span: 819bp (94.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|92887167|gb|ABE88685.1| |
score: 103 |
e-value: 2e-20 |
Identity: 26.77% |
Span: 741bp (85.1%) |
Frame: 1 |
| Integrase, |
| Match: gi|92874005|gb|ABE82335.1| |
score: 100 |
e-value: 2e-19 |
Identity: 25.79% |
Span: 741bp (85.1%) |
Frame: 1 |
| Integrase, |
| Match: gi|92873349|gb|ABE81813.1| |
score: 99.8 |
e-value: 2e-19 |
Identity: 29.49% |
Span: 690bp (79.2%) |
Frame: 1 |
| Integrase, |
| Match: gi|9758329|dbj|BAB08885.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 28.84% |
Span: 636bp (73.0%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|92868103|gb|ABE78193.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 25.75% |
Span: 789bp (90.6%) |
Frame: 1 |
| Peptidase |
| Match: gi|5306241|gb|AAD41974.1| |
score: 96.7 |
e-value: 2e-18 |
Identity: 30.92% |
Span: 621bp (71.3%) |
Frame: 1 |
| putative |
| Match: gi|92892390|gb|ABE91222.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 29.58% |
Span: 621bp (71.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 27.36% |
Span: 627bp (72.0%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|2194136|gb|AAB61111.1| |
score: 94.4 |
e-value: 9e-18 |
Identity: 28.57% |
Span: 690bp (79.2%) |
Frame: 1 |
| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gbU12626) [Arabidopsis thaliana] |
| Match: gi|3779026|gb|AAC67205.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 27.36% |
Span: 627bp (72.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|92882350|gb|ABE86681.1| |
score: 91.7 |
e-value: 6e-17 |
Identity: 26.43% |
Span: 675bp (77.5%) |
Frame: 1 |
| IMP |
| Match: gi|53793721|gb|AAU93584.1| |
score: 90.1 |
e-value: 2e-16 |
Identity: 30.52% |
Span: 636bp (73.0%) |
Frame: 1 |
| putative |
| Match: gi|4388829|gb|AAD19784.1| |
score: 89.4 |
e-value: 3e-16 |
Identity: 25.54% |
Span: 684bp (78.5%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|12322504|gb|AAG51258.1| |
score: 88.6 |
e-value: 5e-16 |
Identity: 27.83% |
Span: 663bp (76.1%) |
Frame: 1 |
| gi|12322504|gb|AAG51258.1| Ty1/copia-element polyprotein [Arabidopsis thaliana] |
| Match: gi|8777581|dbj|BAA97099.1| |
score: 87.8 |
e-value: 8e-16 |
Identity: 27.19% |
Span: 675bp (77.5%) |
Frame: 1 |
| gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|72384410|gb|AAZ67526.1| |
score: 87.8 |
e-value: 8e-16 |
Identity: 25.69% |
Span: 645bp (74.1%) |
Frame: 1 |
| gi|72384410|gb|AAZ67526.1| 4D11_12 [Brassica rapa subsp. pekinensis] |
| Match: gi|3695393|gb|AAC62795.1| |
score: 87 |
e-value: 1e-15 |
Identity: 27.4% |
Span: 654bp (75.1%) |
Frame: 1 |
| gi|3695393|gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam: rvp.hmm, score: 11.80) [Arabido... |
| Match: gi|5306246|gb|AAD41979.1| |
score: 86.7 |
e-value: 2e-15 |
Identity: 26.91% |
Span: 669bp (76.8%) |
Frame: 1 |
| gi|5306246|gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|4587602|gb|AAD25830.1| |
score: 84.7 |
e-value: 7e-15 |
Identity: 35.81% |
Span: 444bp (51.0%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|40644190|emb|CAC95126.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 29.13% |
Span: 669bp (76.8%) |
Frame: 1 |
| gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] |
| Match: gi|87241386|gb|ABD33244.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 27.15% |
Span: 450bp (51.7%) |
Frame: 1 |
| conserved |
| Match: gi|2642431|gb|AAB87099.1| |
score: 80.9 |
e-value: 1e-13 |
Identity: 27.56% |
Span: 660bp (75.8%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|50253554|gb|AAT71979.1| |
score: 80.1 |
e-value: 2e-13 |
Identity: 25.51% |
Span: 723bp (83.0%) |
Frame: 1 |
| At5g39185 [Arabidopsis thaliana] |
| Match: gi|48310400|gb|AAT41813.1| |
score: 78.2 |
e-value: 6e-13 |
Identity: 26.34% |
Span: 657bp (75.4%) |
Frame: 1 |
| At1g21220 |
| Match: gi|105922450|gb|ABF81417.1| |
score: 77.8 |
e-value: 8e-13 |
Identity: 27.67% |
Span: 612bp (70.3%) |
Frame: 1 |
| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa] |
| Match: gi|7267379|emb|CAB77940.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 28.66% |
Span: 465bp (53.4%) |
Frame: 1 |
| gi|7267379|emb|CAB77940.1| putative polyprotein [Arabidopsis thaliana] >gi|4325355|gb|AAD17352.1| contains similarity... |
| Match: gi|48210026|gb|AAT40537.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 37.5% |
Span: 264bp (30.3%) |
Frame: 1 |
| gi|48210026|gb|AAT40537.1| hypothetical protein PGEC407.3 [Solanum demissum] |
| Match: gi|9954746|gb|AAG09097.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 22.81% |
Span: 783bp (89.9%) |
Frame: 1 |
| gi|9954746|gb|AAG09097.1| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|52354133|gb|AAU44387.1| |
score: 75.1 |
e-value: 5e-12 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|55740501|gb|AAV63843.1| |
score: 74.3 |
e-value: 9e-12 |
Identity: 26.61% |
Span: 669bp (76.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|48209880|gb|AAT40486.1| |
score: 72 |
e-value: 5e-11 |
Identity: 24.36% |
Span: 687bp (78.9%) |
Frame: 1 |
| putative polyprotein [Solanum demissum] |
| Match: gi|92870607|gb|ABE79888.1| |
score: 70.9 |
e-value: 1e-10 |
Identity: 26.32% |
Span: 675bp (77.5%) |
Frame: 1 |
| D-galactoside/L-rhamnose |
| Match: gi|53689769|gb|AAU89779.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 25.88% |
Span: 666bp (76.5%) |
Frame: 1 |
| gi|53689769|gb|AAU89779.1| gag-pol polyprotein-like [Solanum tuberosum] |
| Match: gi|92886086|gb|ABE88096.1| |
score: 67.8 |
e-value: 9e-10 |
Identity: 23.01% |
Span: 705bp (80.9%) |
Frame: 1 |
| Integrase, |
| Match: gi|12321355|gb|AAG50751.1| |
score: 66.2 |
e-value: 3e-09 |
Identity: 21.05% |
Span: 675bp (77.5%) |
Frame: 1 |
| gi|12321355|gb|AAG50751.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|92884399|gb|ABE87342.1| |
score: 66.2 |
e-value: 3e-09 |
Identity: 28.04% |
Span: 606bp (69.6%) |
Frame: 1 |
| Zinc |
| Match: gi|50920123|ref|XP_470422.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 23.56% |
Span: 615bp (70.6%) |
Frame: 1 |
| gi|50920123|ref|XP_470422.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] >gi|27573360|gb|AAO20078.1... |
| Match: gi|50920663|ref|XP_470692.1| |
score: 63.2 |
e-value: 2e-08 |
Identity: 23.19% |
Span: 612bp (70.3%) |
Frame: 1 |
| putative |
| Match: gi|18378607|gb|AAL68641.1| |
score: 63.2 |
e-value: 2e-08 |
Identity: 23.19% |
Span: 612bp (70.3%) |
Frame: 1 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|77551557|gb|ABA94354.1| |
score: 63.2 |
e-value: 2e-08 |
Identity: 23.08% |
Span: 615bp (70.6%) |
Frame: 1 |
| gi|77551557|gb|ABA94354.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50925209|ref|XP_472906.1| |
score: 63.2 |
e-value: 2e-08 |
Identity: 23.19% |
Span: 612bp (70.3%) |
Frame: 1 |
| gi|50925209|ref|XP_472906.1| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] >gi|38345241|emb|CAD41085.2| OS... |
| Match: gi|26450787|dbj|BAC42502.1| |
score: 62.4 |
e-value: 4e-08 |
Identity: 39.19% |
Span: 222bp (25.5%) |
Frame: 1 |
| gi|26450787|dbj|BAC42502.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|92892575|gb|ABE91293.1| |
score: 61.6 |
e-value: 6e-08 |
Identity: 23.08% |
Span: 786bp (90.2%) |
Frame: 1 |
| Reverse |
| Match: gi|92890368|gb|ABE90345.1| |
score: 60.8 |
e-value: 1e-07 |
Identity: 21.84% |
Span: 759bp (87.1%) |
Frame: 1 |
| Integrase, |
| Match: gi|92893037|gb|ABE91551.1| |
score: 60.1 |
e-value: 2e-07 |
Identity: 23.05% |
Span: 720bp (82.7%) |
Frame: 1 |
| Integrase, |
| Match: gi|110741688|dbj|BAE98790.1| |
score: 59.3 |
e-value: 3e-07 |
Identity: 27.27% |
Span: 327bp (37.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|92869452|gb|ABE79166.1| |
score: 58.2 |
e-value: 7e-07 |
Identity: 22.39% |
Span: 582bp (66.8%) |
Frame: 1 |
| Zinc |
| Match: gi|92896001|gb|ABE93008.1| |
score: 57.8 |
e-value: 9e-07 |
Identity: 22.66% |
Span: 588bp (67.5%) |
Frame: 1 |
| Zinc |
| Match: gi|92880888|gb|ABE85912.1| |
score: 57.4 |
e-value: 1e-06 |
Identity: 24.71% |
Span: 516bp (59.2%) |
Frame: 1 |
| retrotransposon |
| Match: gi|92873728|gb|ABE82112.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 28.44% |
Span: 318bp (36.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|92894448|gb|ABE92232.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 24.75% |
Span: 573bp (65.8%) |
Frame: 1 |
| Integrase, |
| Match: gi|92894041|gb|ABE92054.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 36.51% |
Span: 189bp (21.7%) |
Frame: 1 |
| probable |
| Match: gi|7269049|emb|CAB79159.1| |
score: 50.4 |
e-value: 0.0001 |
Identity: 20% |
Span: 447bp (51.3%) |
Frame: 1 |
| gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] >gi|2961349|emb|CAA18107.1| LTR re... |
|
| 23 lower scoring hits censored -- only 91 best hits are stored. |
