| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At2G34450.1 |
score: 117 |
e-value: 1e-26 |
Identity: 73.91% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group (HMG1/2) family protein | chr2:14534997-14536527 REVERSE |
| Match: At2G34450.2 |
score: 112 |
e-value: 3e-25 |
Identity: 72.86% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group (HMG1/2) family protein | chr2:14534997-14536527 REVERSE |
| Match: At3G51880.1 |
score: 69.7 |
e-value: 2e-12 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD1, HMGB1 | HMGB1 (HIGH MOBILITY GROUP B 1); transcription factor | chr3:19258218-19259468 REVERSE |
| Match: At3G51880.2 |
score: 69.7 |
e-value: 2e-12 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD1, HMGB1 | HMGB1 (HIGH MOBILITY GROUP B 1) | chr3:19258218-19259468 REVERSE |
| Match: At1G20693.2 |
score: 65.5 |
e-value: 4e-11 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: HMG BETA 1, NFD2, NFD02, HMGB2 | HMGB2 (HIGH MOBILITY GROUP B 2) | chr1:7177272-7178477 FORWARD |
| Match: At1G20693.1 |
score: 65.5 |
e-value: 4e-11 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: HMG BETA 1, NFD2, NFD02, HMGB2 | HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor | chr1:7177272-71784... |
| Match: At4G35570.1 |
score: 64.3 |
e-value: 9e-11 |
Identity: 42.03% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD5, HMGD, NFD05, HMGB5 | HMGB5 (HIGH MOBILITY GROUP B 5); transcription factor | chr4:16887368-16888189 R... |
| Match: At2G17560.2 |
score: 63.9 |
e-value: 1e-10 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD4, NFD04, HMGB4 | HMGB4 (HIGH MOBILITY GROUP B 4) | chr2:7649568-7650550 REVERSE |
| Match: At1G20696.1 |
score: 63.9 |
e-value: 1e-10 |
Identity: 42.03% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD3, NFD03, HMGB3 | HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor | chr1:7179815-7181164 FORWARD |
| Match: At2G17560.1 |
score: 63.9 |
e-value: 1e-10 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| Symbols: NFD4, NFD04, HMGB4 | HMGB4 (HIGH MOBILITY GROUP B 4); transcription factor | chr2:7649568-7650550 REVERSE |
| Match: At1G20696.2 |
score: 61.2 |
e-value: 7e-10 |
Identity: 41.54% |
Span: 195bp (22.7%) |
Frame: 2 |
| Symbols: NFD3, NFD03, HMGB3 | HMGB3 (HIGH MOBILITY GROUP B 3) | chr1:7179815-7181183 FORWARD |
| Match: At5G23420.1 |
score: 49.3 |
e-value: 3e-06 |
Identity: 40.68% |
Span: 177bp (20.6%) |
Frame: 2 |
| Symbols: HMGB6 | HMGB6 (High mobility group B 6); transcription factor | chr5:7888715-7890114 REVERSE |
|
| 1 lower scoring hits censored -- only 12 best hits are stored. |
| genbank/nr [blastx] | Showing best 49 hits recorded |
| Match: gi|18403553|ref|NP_565788.1| |
score: 117 |
e-value: 8e-25 |
Identity: 73.91% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group (HMG1/2) family protein [Arabidopsis thaliana] >gi20197083|gb|AAC26692.2| putative HMG protein [A... |
| Match: gi|79324303|ref|NP_001031480.1| |
score: 112 |
e-value: 2e-23 |
Identity: 72.86% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group (HMG1/2) family protein [Arabidopsis thaliana] |
| Match: gi|56202161|dbj|BAD73639.1| |
score: 108 |
e-value: 2e-22 |
Identity: 65.22% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMG protein-like [Oryza sativa Japonica Group] >gi125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sati... |
| Match: gi|34910914|ref|NP_916804.1| |
score: 72.8 |
e-value: 2e-11 |
Identity: 50.72% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|34910914|ref|NP_916804.1| OSJNBb0063G05.2 [Oryza sativa (japonica cultivar-group)] gi|20161572|dbj|BAB90493.1| OSJ... |
| Match: gi|729737|sp|P40620|HMGL_VICFA |
score: 71.6 |
e-value: 4e-11 |
Identity: 42.65% |
Span: 204bp (23.8%) |
Frame: 2 |
| gi|729737|sp|P40620|HMGL_VICFA HMG1/2-like protein gi|541981|pir||S39556 high mobility group protein HMG - fava bean |
| Match: gi|106879575|emb|CAJ38371.1| |
score: 70.1 |
e-value: 1e-10 |
Identity: 43.28% |
Span: 201bp (23.4%) |
Frame: 2 |
| HMG-protein [Plantago major] |
| Match: gi|42572635|ref|NP_974413.1| |
score: 69.7 |
e-value: 2e-10 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|15231065|ref|NP_190756.1| |
score: 69.7 |
e-value: 2e-10 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|436424|emb|CAA54168.1| |
score: 68.2 |
e-value: 4e-10 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMG 1 protein [Pisum sativum] |
| Match: gi|47027098|gb|AAT08762.1| |
score: 68.2 |
e-value: 4e-10 |
Identity: 42.86% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMG transcription factor [Hyacinthus orientalis] |
| Match: gi|1052956|gb|AAC50019.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 39.71% |
Span: 204bp (23.8%) |
Frame: 2 |
| high mobility group protein 2 HMG2 [Ipomoea nil] |
| Match: gi|729736|sp|P40619|HMGL_IPONI |
score: 65.9 |
e-value: 2e-09 |
Identity: 39.13% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|729736|sp|P40619|HMGL_IPONI HMG1/2-like protein |
| Match: gi|79318286|ref|NP_001031074.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|50252158|dbj|BAD28154.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 39.39% |
Span: 198bp (23.1%) |
Frame: 2 |
| gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa (japonica cultivar-group)] >gi|5025134... |
| Match: gi|63020536|gb|AAY26151.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 40% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group protein [Cucumis sativus] |
| Match: gi|8886929|gb|AAF80615.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|8886929|gb|AAF80615.1| F2D10.18 [Arabidopsis thaliana] |
| Match: gi|18394898|ref|NP_564123.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|54291150|dbj|BAD61823.1| |
score: 65.1 |
e-value: 4e-09 |
Identity: 42.19% |
Span: 192bp (22.4%) |
Frame: 2 |
| HMGB1 |
| Match: gi|15237040|ref|NP_195282.1| |
score: 64.3 |
e-value: 6e-09 |
Identity: 42.03% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|15237040|ref|NP_195282.1| HMG delta protein [Arabidopsis thaliana] gi|7446230|pir||T04662 high mobility group prot... |
| Match: gi|15227862|ref|NP_179347.1| |
score: 63.9 |
e-value: 8e-09 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|15227862|ref|NP_179347.1| HMG protein -related [Arabidopsis thaliana] gi|25385737|pir||F84553 probable HMG protein... |
| Match: gi|79322411|ref|NP_001031364.1| |
score: 63.9 |
e-value: 8e-09 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB4 |
| Match: gi|2894109|emb|CAA05365.1| |
score: 63.9 |
e-value: 8e-09 |
Identity: 40.58% |
Span: 207bp (24.1%) |
Frame: 2 |
| high mobility group protein [Solanum tuberosum] |
| Match: gi|18394900|ref|NP_564124.1| |
score: 63.9 |
e-value: 8e-09 |
Identity: 42.03% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|8886929|gb|AAF80615.1| |
score: 63.9 |
e-value: 8e-09 |
Identity: 42.03% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|8886929|gb|AAF80615.1| F2D10.18 [Arabidopsis thaliana] |
| Match: gi|2832355|emb|CAA74403.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| HMG protein [Arabidopsis thaliana] |
| Match: gi|397396|emb|CAA46876.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 40.62% |
Span: 192bp (22.4%) |
Frame: 2 |
| gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays] >gi|7446229|pir||T03640 high mobility group protein MNB1b - ... |
| Match: gi|22347617|gb|AAM95942.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 40.62% |
Span: 192bp (22.4%) |
Frame: 2 |
| gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays] >gi|22329|emb|CAA41220.1| ... |
| Match: gi|21592453|gb|AAM64404.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|50726318|dbj|BAD33893.1| |
score: 62.8 |
e-value: 2e-08 |
Identity: 39.13% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|18700443|dbj|BAB85204.1| |
score: 62.8 |
e-value: 2e-08 |
Identity: 37.88% |
Span: 198bp (23.1%) |
Frame: 2 |
| gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|4468042|emb|CAB37859.1| |
score: 62.4 |
e-value: 2e-08 |
Identity: 42.86% |
Span: 168bp (19.6%) |
Frame: 2 |
| gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba] |
| Match: gi|13877775|gb|AAK43965.1| |
score: 62 |
e-value: 3e-08 |
Identity: 43.48% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|13877775|gb|AAK43965.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|22135473|gb|AAM93217.1| |
score: 62 |
e-value: 3e-08 |
Identity: 38.24% |
Span: 204bp (23.8%) |
Frame: 2 |
| gi|22135473|gb|AAM93217.1| nucleasome/chromatin assembly factor D protein NFD101 [Zea mays] >gi|2196672|emb|CAA70045.... |
| Match: gi|17017392|gb|AAL33650.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 38.24% |
Span: 204bp (23.8%) |
Frame: 2 |
| gi|17017392|gb|AAL33650.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|1845195|emb|CAA69605.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 37.88% |
Span: 198bp (23.1%) |
Frame: 2 |
| gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays] >gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays] |
| Match: gi|18645|emb|CAA41200.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 37.68% |
Span: 207bp (24.1%) |
Frame: 2 |
| gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max] >gi|123379|sp|P26585|HMGL_SOYBN HMG1/2-like protein (S... |
| Match: gi|17017394|gb|AAL33651.1| |
score: 61.2 |
e-value: 5e-08 |
Identity: 37.88% |
Span: 198bp (23.1%) |
Frame: 2 |
| gi|17017394|gb|AAL33651.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|79318295|ref|NP_001031075.1| |
score: 61.2 |
e-value: 5e-08 |
Identity: 41.54% |
Span: 195bp (22.7%) |
Frame: 2 |
| HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|1813329|dbj|BAA19156.1| |
score: 60.8 |
e-value: 7e-08 |
Identity: 35.29% |
Span: 204bp (23.8%) |
Frame: 2 |
| HMG-1 [Canavalia gladiata] |
| Match: gi|21803|emb|CAA77641.1| |
score: 60.5 |
e-value: 9e-08 |
Identity: 39.06% |
Span: 192bp (22.4%) |
Frame: 2 |
| gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum] >gi|729738|sp|P40621|HMGL_WHEAT HMG1/2-like ... |
| Match: gi|2196548|gb|AAB61215.1| |
score: 60.1 |
e-value: 1e-07 |
Identity: 36.76% |
Span: 204bp (23.8%) |
Frame: 2 |
| DNA-binding protein [Nicotiana tabacum] |
| Match: gi|950053|emb|CAA90679.1| |
score: 58.9 |
e-value: 3e-07 |
Identity: 37.5% |
Span: 192bp (22.4%) |
Frame: 2 |
| gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|1845197|emb|CAA69606.1| |
score: 58.9 |
e-value: 3e-07 |
Identity: 37.5% |
Span: 192bp (22.4%) |
Frame: 2 |
| gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays] |
| Match: gi|50940237|ref|XP_479646.1| |
score: 57 |
e-value: 1e-06 |
Identity: 43.3% |
Span: 285bp (33.2%) |
Frame: 2 |
| gi|50940237|ref|XP_479646.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza sativa (japonica cultiva... |
| Match: gi|18419623|gb|AAL69379.1| |
score: 57 |
e-value: 1e-06 |
Identity: 44.44% |
Span: 162bp (18.9%) |
Frame: 2 |
| gi|18419623|gb|AAL69379.1| HMG-domain containing protein [Narcissus pseudonarcissus] |
| Match: gi|22135475|gb|AAM93218.1| |
score: 57 |
e-value: 1e-06 |
Identity: 48.15% |
Span: 162bp (18.9%) |
Frame: 2 |
| gi|22135475|gb|AAM93218.1| nucleasome/chromatin assembly factor D protein NFD106 [Zea mays] >gi|17017396|gb|AAL33652.... |
| Match: gi|51858856|gb|AAH81424.1| |
score: 52.8 |
e-value: 2e-05 |
Identity: 31.88% |
Span: 204bp (23.8%) |
Frame: 2 |
| Zgc:112073 |
| Match: gi|62202670|gb|AAH93186.1| |
score: 52.8 |
e-value: 2e-05 |
Identity: 31.88% |
Span: 204bp (23.8%) |
Frame: 2 |
| Zgc:112073 |
| Match: gi|4995921|emb|CAB44297.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 43.18% |
Span: 132bp (15.4%) |
Frame: 2 |
| gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays] |
|
| 192 lower scoring hits censored -- only 49 best hits are stored. |
