| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225440123|ref|XP_002277489.1| |
score: 380 |
e-value: 8e-104 |
Identity: 68.42% |
Span: 843bp (98.6%) |
Frame: 3 |
| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-contai... |
| Match: gi|224089945|ref|XP_002308876.1| |
score: 364 |
e-value: 6e-99 |
Identity: 65.28% |
Span: 852bp (99.6%) |
Frame: 3 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222854852|gb|EEE92399.1| chromatin remodeling complex s... |
| Match: gi|255552483|ref|XP_002517285.1| |
score: 355 |
e-value: 3e-96 |
Identity: 64.34% |
Span: 843bp (98.6%) |
Frame: 3 |
| helicase, putative [Ricinus communis] >gi223543548|gb|EEF45078.1| helicase, putative [Ricinus communis] |
| Match: gi|22326612|ref|NP_196132.2| |
score: 333 |
e-value: 2e-89 |
Identity: 58.97% |
Span: 852bp (99.6%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|60390959|sp|Q9FF61.1|SM3L1_ARATH |
score: 333 |
e-value: 2e-89 |
Identity: 58.97% |
Span: 852bp (99.6%) |
Frame: 3 |
| RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-... |
| Match: gi|242046730|ref|XP_002461111.1| |
score: 313 |
e-value: 2e-83 |
Identity: 54.01% |
Span: 843bp (98.6%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor] >gi241924488|gb|EER97632.1| hypothetical protein SORBIDRA... |
| Match: gi|222637545|gb|EEE67677.1| |
score: 302 |
e-value: 3e-80 |
Identity: 54.86% |
Span: 843bp (98.6%) |
Frame: 3 |
| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group] |
| Match: gi|125559347|gb|EAZ04883.1| |
score: 302 |
e-value: 3e-80 |
Identity: 54.86% |
Span: 843bp (98.6%) |
Frame: 3 |
| hypothetical protein OsI_27065 [Oryza sativa Indica Group] |
| Match: gi|115473675|ref|NP_001060436.1| |
score: 302 |
e-value: 3e-80 |
Identity: 54.86% |
Span: 843bp (98.6%) |
Frame: 3 |
| Os07g0642400 [Oryza sativa (japonica cultivar-group)] >gi23237908|dbj|BAC16482.1| putative RUSH-1alpha [Oryza sativa ... |
| Match: gi|124360542|gb|ABN08552.1| |
score: 302 |
e-value: 4e-80 |
Identity: 61.81% |
Span: 738bp (86.3%) |
Frame: 3 |
| SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ [Medicago truncatula] |
| Match: gi|168025225|ref|XP_001765135.1| |
score: 263 |
e-value: 2e-68 |
Identity: 49.14% |
Span: 852bp (99.6%) |
Frame: 3 |
| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] >gi162683722|gb|EDQ70130.1| SNF2 family DNA-de... |
| Match: gi|224139702|ref|XP_002323235.1| |
score: 253 |
e-value: 1e-65 |
Identity: 50% |
Span: 852bp (99.6%) |
Frame: 3 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222867865|gb|EEF04996.1| chromatin remodeling complex s... |
| Match: gi|224139690|ref|XP_002323229.1| |
score: 243 |
e-value: 3e-62 |
Identity: 50% |
Span: 852bp (99.6%) |
Frame: 3 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222867859|gb|EEF04990.1| chromatin remodeling complex s... |
| Match: gi|270247429|emb|CBI32804.1| |
score: 209 |
e-value: 3e-52 |
Identity: 48.25% |
Span: 771bp (90.2%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|125805885|ref|XP_693071.2| |
score: 204 |
e-value: 1e-50 |
Identity: 43.46% |
Span: 771bp (90.2%) |
Frame: 3 |
| PREDICTED: helicase-like transcription factor-like [Danio rerio] >gi169158941|emb|CAQ15009.1| helicase-like transcrip... |
| Match: gi|226459984|gb|EEH57279.1| |
score: 200 |
e-value: 1e-49 |
Identity: 43.8% |
Span: 717bp (83.9%) |
Frame: 3 |
| SNF2 super family [Micromonas pusilla CCMP1545] |
| Match: gi|115623606|ref|XP_786706.2| |
score: 198 |
e-value: 5e-49 |
Identity: 42.03% |
Span: 804bp (94.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] >gi115939608|ref|XP_001193343.1| PREDICTED: hypotheti... |
| Match: gi|255071433|ref|XP_002499390.1| |
score: 198 |
e-value: 7e-49 |
Identity: 40.53% |
Span: 765bp (89.5%) |
Frame: 3 |
| SNF2 super family [Micromonas sp. RCC299] >gi226514653|gb|ACO60649.1| SNF2 super family [Micromonas sp. RCC299] |
| Match: gi|149408770|ref|XP_001508504.1| |
score: 196 |
e-value: 2e-48 |
Identity: 43.48% |
Span: 801bp (93.7%) |
Frame: 3 |
| PREDICTED: similar to helicase-like transcription factor [Ornithorhynchus anatinus] |
| Match: gi|167773597|gb|ABZ92233.1| |
score: 195 |
e-value: 5e-48 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| helicase-like transcription factor [synthetic construct] |
| Match: gi|158255898|dbj|BAF83920.1| |
score: 195 |
e-value: 5e-48 |
Identity: 42.91% |
Span: 822bp (96.1%) |
Frame: 3 |
| unnamed protein product [Homo sapiens] |
| Match: gi|114589754|ref|XP_516811.2| |
score: 195 |
e-value: 5e-48 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 6 [Pan troglodytes] |
| Match: gi|114589744|ref|XP_001138277.1| |
score: 195 |
e-value: 5e-48 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 1 [Pan troglodytes] >g... |
| Match: gi|531196|gb|AAA67436.1| |
score: 195 |
e-value: 5e-48 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| ATPase [Homo sapiens] |
| Match: gi|27882409|gb|AAH44659.1| |
score: 195 |
e-value: 5e-48 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| Helicase-like transcription factor [Homo sapiens] >gi119599297|gb|EAW78891.1| SWI/SNF related, matrix associated, act... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At5G05130.1 |
score: 333 |
e-value: 1e-91 |
Identity: 58.97% |
Span: 852bp (99.6%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr5:1... |
| Match: At5G22750.1 |
score: 175 |
e-value: 3e-44 |
Identity: 43.93% |
Span: 714bp (83.5%) |
Frame: 3 |
| Symbols: RAD5 | RAD5; ATP binding / DNA binding / helicase/ protein binding / zinc ion binding | chr5:7565377-757087... |
| Match: At5G43530.1 |
score: 174 |
e-value: 8e-44 |
Identity: 45.26% |
Span: 687bp (80.4%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr5:1... |
| Match: At1G11100.1 |
score: 135 |
e-value: 4e-32 |
Identity: 33.03% |
Span: 789bp (92.3%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:3703934-370... |
| Match: At1G61140.1 |
score: 132 |
e-value: 3e-31 |
Identity: 34.26% |
Span: 711bp (83.2%) |
Frame: 3 |
| Symbols: EDA16 | EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / z... |
| Match: At1G05120.1 |
score: 132 |
e-value: 3e-31 |
Identity: 34.71% |
Span: 669bp (78.2%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At3G20010.1 |
score: 130 |
e-value: 1e-30 |
Identity: 31.23% |
Span: 738bp (86.3%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:6... |
| Match: At1G50410.1 |
score: 129 |
e-value: 3e-30 |
Identity: 31.94% |
Span: 744bp (87.0%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At1G02670.1 |
score: 113 |
e-value: 2e-25 |
Identity: 38.86% |
Span: 519bp (60.7%) |
Frame: 3 |
| DNA repair protein, putative | chr1:576046-580299 FORWARD |
| Match: At3G16600.1 |
score: 109 |
e-value: 2e-24 |
Identity: 30.43% |
Span: 672bp (78.6%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:5... |
| Match: At3G57300.1 |
score: 93.2 |
e-value: 2e-19 |
Identity: 38.93% |
Span: 447bp (52.3%) |
Frame: 3 |
| transcriptional activator, putative | chr3:21210591-21218614 FORWARD |
| Match: At2G13370.1 |
score: 90.1 |
e-value: 2e-18 |
Identity: 34.02% |
Span: 579bp (67.7%) |
Frame: 3 |
| Symbols: CHR5 | CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase | chr2:55516... |
| Match: At5G66750.1 |
score: 88.6 |
e-value: 4e-18 |
Identity: 34.19% |
Span: 447bp (52.3%) |
Frame: 3 |
| Symbols: SOM4, SOM1, CHR1, DDM1 | DDM1 (DECREASED DNA METHYLATION 1); helicase | chr5:26666276-26670095 FORWARD |
| Match: At5G63950.1 |
score: 88.2 |
e-value: 6e-18 |
Identity: 33.92% |
Span: 513bp (60.0%) |
Frame: 3 |
| Symbols: CHR24 | CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase | chr5:25609386-25615631 REVERSE |
| Match: At3G12810.1 |
score: 87 |
e-value: 1e-17 |
Identity: 40.16% |
Span: 375bp (43.9%) |
Frame: 3 |
| Symbols: SRCAP, CHR13, PIE1 | PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase... |
| Match: At5G18620.2 |
score: 86.3 |
e-value: 2e-17 |
Identity: 30.1% |
Span: 606bp (70.9%) |
Frame: 3 |
| Symbols: CHR17 | CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase | chr5:6196192-6202060 REVERSE |
| Match: At5G18620.1 |
score: 86.3 |
e-value: 2e-17 |
Identity: 30.1% |
Span: 606bp (70.9%) |
Frame: 3 |
| Symbols: CHR17 | CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase | chr5:6196192-6202060 REVERSE |
| Match: At2G18760.1 |
score: 85.9 |
e-value: 3e-17 |
Identity: 32.12% |
Span: 564bp (66.0%) |
Frame: 3 |
| Symbols: CHR8 | CHR8 (chromatin remodeling 8); ATP binding / DNA binding / helicase | chr2:8136236-8140584 FORWARD |
| Match: At2G44980.1 |
score: 84.3 |
e-value: 8e-17 |
Identity: 34.15% |
Span: 492bp (57.5%) |
Frame: 3 |
| transcription regulatory protein SNF2, putative | chr2:18559515-18563744 REVERSE |
| Match: At3G06400.1 |
score: 84 |
e-value: 1e-16 |
Identity: 31.64% |
Span: 519bp (60.7%) |
Frame: 3 |
| Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase | chr3:1941072-1946706 FORWARD |
| Match: At3G54280.1 |
score: 82 |
e-value: 4e-16 |
Identity: 36.72% |
Span: 378bp (44.2%) |
Frame: 3 |
| ATP binding / DNA binding / helicase | chr3:20103339-20114785 FORWARD |
| Match: At3G06010.1 |
score: 81.6 |
e-value: 5e-16 |
Identity: 35.67% |
Span: 456bp (53.3%) |
Frame: 3 |
| homeotic gene regulator, putative | chr3:1802441-1807290 REVERSE |
| Match: At2G44980.2 |
score: 81.6 |
e-value: 5e-16 |
Identity: 32.37% |
Span: 492bp (57.5%) |
Frame: 3 |
| transcription regulatory protein SNF2, putative | chr2:18559418-18563744 REVERSE |
| Match: At2G28290.3 |
score: 80.9 |
e-value: 9e-16 |
Identity: 31.35% |
Span: 549bp (64.2%) |
Frame: 3 |
| Symbols: CHR3, SYD | SYD (SPLAYED) | chr2:12063848-12080027 FORWARD |
| Match: At2G28290.1 |
score: 80.9 |
e-value: 9e-16 |
Identity: 31.35% |
Span: 549bp (64.2%) |
Frame: 3 |
| Symbols: CHR3, SYD | SYD (SPLAYED) | chr2:12063848-12080027 FORWARD |
|
| 15 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9FF61 |
score: 333 |
e-value: 1e-90 |
Identity: 58.97% |
Span: 852bp (99.6%) |
Frame: 3 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arab... |
| Match: Q14527 |
score: 195 |
e-value: 3e-49 |
Identity: 41.99% |
Span: 822bp (96.1%) |
Frame: 3 |
| Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2 |
| Match: Q6PCN7 |
score: 193 |
e-value: 1e-48 |
Identity: 43.27% |
Span: 804bp (94.0%) |
Frame: 3 |
| Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1 |
| Match: Q95216 |
score: 190 |
e-value: 9e-48 |
Identity: 42.55% |
Span: 804bp (94.0%) |
Frame: 3 |
| Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1 |
| Match: Q9FNI6 |
score: 175 |
e-value: 3e-43 |
Identity: 43.93% |
Span: 714bp (83.5%) |
Frame: 3 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arab... |
| Match: Q9FIY7 |
score: 174 |
e-value: 9e-43 |
Identity: 45.26% |
Span: 687bp (80.4%) |
Frame: 3 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arab... |
| Match: Q4IJ84 |
score: 164 |
e-value: 9e-40 |
Identity: 39.34% |
Span: 684bp (80.0%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Gibberella zeae GN=RAD5 PE=3 SV=1 |
| Match: Q5ACX1 |
score: 163 |
e-value: 1e-39 |
Identity: 36% |
Span: 801bp (93.7%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Candida albicans GN=RAD5 PE=3 SV=1 |
| Match: Q7S1P9 |
score: 152 |
e-value: 3e-36 |
Identity: 37.79% |
Span: 723bp (84.6%) |
Frame: 3 |
| DNA repair protein rad-5 OS=Neurospora crassa GN=rad-5 PE=3 SV=2 |
| Match: Q6CJM4 |
score: 146 |
e-value: 2e-34 |
Identity: 35.5% |
Span: 732bp (85.6%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Kluyveromyces lactis GN=RAD5 PE=3 SV=1 |
| Match: Q5KPG8 |
score: 146 |
e-value: 2e-34 |
Identity: 38.89% |
Span: 720bp (84.2%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Cryptococcus neoformans GN=RAD5 PE=3 SV=1 |
| Match: Q753V5 |
score: 146 |
e-value: 2e-34 |
Identity: 36.32% |
Span: 660bp (77.2%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Ashbya gossypii GN=RAD5 PE=3 SV=1 |
| Match: P79051 |
score: 143 |
e-value: 1e-33 |
Identity: 33.33% |
Span: 801bp (93.7%) |
Frame: 3 |
| ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2 |
| Match: P32849 |
score: 142 |
e-value: 2e-33 |
Identity: 35.17% |
Span: 660bp (77.2%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Saccharomyces cerevisiae GN=RAD5 PE=1 SV=1 |
| Match: Q4WVM1 |
score: 141 |
e-value: 5e-33 |
Identity: 34.81% |
Span: 702bp (82.1%) |
Frame: 3 |
| DNA repair protein rad5 OS=Aspergillus fumigatus GN=rad5 PE=3 SV=2 |
| Match: Q5BHD6 |
score: 141 |
e-value: 6e-33 |
Identity: 33.55% |
Span: 702bp (82.1%) |
Frame: 3 |
| DNA repair protein rad5 OS=Emericella nidulans GN=rad5 PE=3 SV=1 |
| Match: Q6BIP2 |
score: 141 |
e-value: 6e-33 |
Identity: 31.84% |
Span: 702bp (82.1%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Debaryomyces hansenii GN=RAD5 PE=3 SV=2 |
| Match: Q4PGG5 |
score: 136 |
e-value: 2e-31 |
Identity: 33.92% |
Span: 747bp (87.4%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Ustilago maydis GN=RAD5 PE=3 SV=1 |
| Match: Q6C2R8 |
score: 131 |
e-value: 7e-30 |
Identity: 33.77% |
Span: 654bp (76.5%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Yarrowia lipolytica GN=RAD5 PE=3 SV=1 |
| Match: Q6FY76 |
score: 127 |
e-value: 7e-29 |
Identity: 29.86% |
Span: 747bp (87.4%) |
Frame: 3 |
| DNA repair protein RAD5 OS=Candida glabrata GN=RAD5 PE=3 SV=1 |
| Match: P31244 |
score: 127 |
e-value: 1e-28 |
Identity: 33.83% |
Span: 738bp (86.3%) |
Frame: 3 |
| DNA repair protein RAD16 OS=Saccharomyces cerevisiae GN=RAD16 PE=1 SV=1 |
| Match: O13762 |
score: 121 |
e-value: 5e-27 |
Identity: 30.1% |
Span: 777bp (90.9%) |
Frame: 3 |
| Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1 |
| Match: Q10332 |
score: 120 |
e-value: 1e-26 |
Identity: 40% |
Span: 519bp (60.7%) |
Frame: 3 |
| Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe GN=SPBC582.10c PE=1 SV=1 |
| Match: O60177 |
score: 119 |
e-value: 3e-26 |
Identity: 29.76% |
Span: 714bp (83.5%) |
Frame: 3 |
| Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe GN=SPBC23E6.02 PE=2 SV=1 |
| Match: P36607 |
score: 118 |
e-value: 6e-26 |
Identity: 31.93% |
Span: 651bp (76.1%) |
Frame: 3 |
| DNA repair protein rad5 OS=Schizosaccharomyces pombe GN=rad8 PE=1 SV=1 |
|
| 157 lower scoring hits censored -- only 25 best hits are stored. |
