| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|147867252|emb|CAN81194.1| |
score: 358 |
e-value: 3e-102 |
Identity: 86.55% |
Span: 669bp (79.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|118489833|gb|ABK96716.1| |
score: 353 |
e-value: 4e-101 |
Identity: 86.55% |
Span: 669bp (79.4%) |
Frame: 1 |
| unknown |
| Match: gi|212721602|ref|NP_001131612.1| |
score: 327 |
e-value: 3e-90 |
Identity: 80.8% |
Span: 669bp (79.4%) |
Frame: 1 |
| RNase PH homolog [Zea mays] >gi194692034|gb|ACF80101.1| unknown [Zea mays] |
| Match: gi|195622232|gb|ACG32946.1| |
score: 326 |
e-value: 6e-90 |
Identity: 80.8% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome complex exonuclease RRP41 [Zea mays] |
| Match: gi|218201746|gb|EEC84173.1| |
score: 325 |
e-value: 1e-89 |
Identity: 79.91% |
Span: 669bp (79.4%) |
Frame: 1 |
| hypothetical protein OsI_30553 [Oryza sativa Indica Group] >gi222641142|gb|EEE69274.1| hypothetical protein OsJ_28540... |
| Match: gi|15233167|ref|NP_191721.1| |
score: 316 |
e-value: 2e-88 |
Identity: 76.65% |
Span: 678bp (80.4%) |
Frame: 1 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|168063069|ref|XP_001783497.1| |
score: 284 |
e-value: 2e-78 |
Identity: 67.86% |
Span: 672bp (79.7%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162664987|gb|EDQ51687.1| predicted protein [Physcomitrella... |
| Match: gi|47848476|dbj|BAD22331.1| |
score: 261 |
e-value: 1e-70 |
Identity: 67.52% |
Span: 642bp (76.2%) |
Frame: 1 |
| putative exosome component 4 [Oryza sativa Japonica Group] >gi47848647|dbj|BAD22495.1| putative exosome component 4 [... |
| Match: gi|115478178|ref|NP_001062684.1| |
score: 255 |
e-value: 4e-66 |
Identity: 83.72% |
Span: 513bp (60.9%) |
Frame: 1 |
| Os09g0252000 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|159474468|ref|XP_001695347.1| |
score: 247 |
e-value: 2e-68 |
Identity: 59.64% |
Span: 669bp (79.4%) |
Frame: 1 |
| 3'-5' exoribonuclease PH component of the exosome [Chlamydomonas reinhardtii] >gi158275830|gb|EDP01605.1| 3'-5' exori... |
| Match: gi|156388129|ref|XP_001634554.1| |
score: 230 |
e-value: 2e-60 |
Identity: 51.33% |
Span: 678bp (80.4%) |
Frame: 1 |
| predicted protein [Nematostella vectensis] >gi156221638|gb|EDO42491.1| predicted protein [Nematostella vectensis] |
| Match: gi|148228965|ref|NP_001088679.1| |
score: 219 |
e-value: 2e-55 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome component 4 [Xenopus laevis] >gi56270437|gb|AAH87307.1| LOC495942 protein [Xenopus laevis] |
| Match: gi|62858329|ref|NP_001016436.1| |
score: 218 |
e-value: 5e-55 |
Identity: 51.34% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome component 4 [Xenopus (Silurana) tropicalis] >gi89273823|emb|CAJ82158.1| exosome component 4 [Xenopus tropical... |
| Match: gi|213514504|ref|NP_001134304.1| |
score: 217 |
e-value: 5e-55 |
Identity: 50.68% |
Span: 654bp (77.6%) |
Frame: 1 |
| Exosome complex exonuclease RRP41 [Salmo salar] >gi209732228|gb|ACI66983.1| Exosome complex exonuclease RRP41 [Salmo ... |
| Match: gi|198442889|ref|NP_001128332.1| |
score: 213 |
e-value: 2e-53 |
Identity: 50.89% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome |
| Match: gi|219430577|ref|XP_002213076.1| |
score: 212 |
e-value: 1e-53 |
Identity: 53.81% |
Span: 627bp (74.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|9506689|ref|NP_061910.1| |
score: 211 |
e-value: 6e-53 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| gi|9506689|ref|NP_061910.1| exosome complex exonuclease RRP41; exosome component Rrp41; ribosomal RNA-processing prot... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 211 |
e-value: 6e-53 |
Identity: 50% |
Span: 669bp (79.4%) |
Frame: 1 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|41152247|ref|NP_957033.1| |
score: 211 |
e-value: 3e-53 |
Identity: 49.77% |
Span: 648bp (76.9%) |
Frame: 1 |
| putative exosome complex exonuclease RRP41 [Danio rerio] >gi37747963|gb|AAH59525.1| Exosc4 protein [Danio rerio] >gi|... |
| Match: gi|148697598|gb|EDL29545.1| |
score: 211 |
e-value: 6e-53 |
Identity: 50% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome |
| Match: gi|122920908|pdb|2NN6|B |
score: 211 |
e-value: 6e-53 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| Chain |
| Match: gi|75045923|sp|Q7YRA3|EXOS4_BOVIN |
score: 211 |
e-value: 6e-53 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| RecName: |
| Match: gi|57095694|ref|XP_539207.1| |
score: 210 |
e-value: 1e-52 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| gi|57095694|ref|XP_539207.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|194215186|ref|XP_001917049.1| |
score: 210 |
e-value: 1e-52 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|126322962|ref|XP_001364428.1| |
score: 209 |
e-value: 2e-52 |
Identity: 49.55% |
Span: 669bp (79.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|118151420|ref|NP_001071554.1| |
score: 209 |
e-value: 2e-52 |
Identity: 50% |
Span: 669bp (79.4%) |
Frame: 1 |
| exosome |
| Match: gi|73974735|ref|XP_857497.1| |
score: 205 |
e-value: 4e-51 |
Identity: 49.78% |
Span: 669bp (79.4%) |
Frame: 1 |
| gi|73974735|ref|XP_857497.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|149430580|ref|XP_001515504.1| |
score: 202 |
e-value: 2e-50 |
Identity: 49.32% |
Span: 654bp (77.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|73974737|ref|XP_857538.1| |
score: 201 |
e-value: 5e-50 |
Identity: 49.78% |
Span: 669bp (79.4%) |
Frame: 1 |
| gi|73974737|ref|XP_857538.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|219436298|ref|XP_002215927.1| |
score: 201 |
e-value: 2e-50 |
Identity: 52.38% |
Span: 627bp (74.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|215493342|gb|EEC02983.1| |
score: 198 |
e-value: 2e-50 |
Identity: 50.75% |
Span: 600bp (71.2%) |
Frame: 1 |
| exosomal |
| Match: gi|66802544|ref|XP_635144.1| |
score: 196 |
e-value: 1e-51 |
Identity: 44.64% |
Span: 666bp (79.0%) |
Frame: 1 |
| gi|66802544|ref|XP_635144.1| hypothetical protein DDB0183823 [Dictyostelium discoideum] >gi|60463463|gb|EAL61648.1| h... |
| Match: gi|212506432|gb|EEB10650.1| |
score: 193 |
e-value: 2e-47 |
Identity: 45.95% |
Span: 651bp (77.2%) |
Frame: 1 |
| Exosome |
| Match: gi|57641569|ref|YP_184047.1| |
score: 188 |
e-value: 5e-46 |
Identity: 49.28% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|57641569|ref|YP_184047.1| exosome subunit Rrp41p homolog, 3'-5' exoribonuclease [Thermococcus kodakarensis KOD1] >... |
| Match: gi|47220383|emb|CAF98482.1| |
score: 186 |
e-value: 2e-45 |
Identity: 40.68% |
Span: 648bp (76.9%) |
Frame: 1 |
| gi|47220383|emb|CAF98482.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|212223175|ref|YP_002306411.1| |
score: 185 |
e-value: 3e-45 |
Identity: 49.28% |
Span: 621bp (73.7%) |
Frame: 1 |
| 3'-5' |
| Match: gi|197627711|gb|EDY40258.1| |
score: 184 |
e-value: 8e-45 |
Identity: 48.79% |
Span: 621bp (73.7%) |
Frame: 1 |
| exosome |
| Match: gi|116754659|ref|YP_843777.1| |
score: 183 |
e-value: 2e-44 |
Identity: 48.26% |
Span: 690bp (81.9%) |
Frame: 1 |
| exosome |
| Match: gi|14520826|ref|NP_126301.1| |
score: 182 |
e-value: 4e-44 |
Identity: 48.31% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi] gi|29337010|sp|Q9V119|ECX1_PYRAB Probable exosome co... |
| Match: gi|15678710|ref|NP_275826.1| |
score: 182 |
e-value: 2e-44 |
Identity: 43.67% |
Span: 687bp (81.5%) |
Frame: 1 |
| gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacter thermautotrophicus] gi|29336573|sp|O26779|ECX1_METT... |
| Match: gi|20093819|ref|NP_613666.1| |
score: 181 |
e-value: 6e-45 |
Identity: 48.83% |
Span: 639bp (75.8%) |
Frame: 1 |
| gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH [Methanopyrus kandleri AV19] gi|29336819|sp|Q8TYC1|E... |
| Match: gi|214033135|gb|EEB73963.1| |
score: 181 |
e-value: 5e-44 |
Identity: 47.34% |
Span: 621bp (73.7%) |
Frame: 1 |
| exosome |
| Match: gi|18977940|ref|NP_579297.1| |
score: 181 |
e-value: 5e-44 |
Identity: 48.31% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosus DSM 3638] gi|29336822|sp|Q8U0L9|ECX1_PYRFU Probable... |
| Match: gi|124027456|ref|YP_001012776.1| |
score: 180 |
e-value: 1e-43 |
Identity: 48.28% |
Span: 609bp (72.2%) |
Frame: 1 |
| ribonuclease |
| Match: gi|14591333|ref|NP_143411.1| |
score: 180 |
e-value: 1e-43 |
Identity: 47.34% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyrococcus horikoshii] gi|29336584|sp|O59223|ECX1_PYRHO Pro... |
| Match: gi|52549121|gb|AAU82970.1| |
score: 179 |
e-value: 3e-43 |
Identity: 46.86% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|52549121|gb|AAU82970.1| ribonuclease PH [uncultured archaeon GZfos24D9] |
| Match: gi|52548652|gb|AAU82501.1| |
score: 177 |
e-value: 7e-43 |
Identity: 46.86% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|52548652|gb|AAU82501.1| ribonuclease PH [uncultured archaeon GZfos18B6] |
| Match: gi|156937005|ref|YP_001434801.1| |
score: 177 |
e-value: 7e-43 |
Identity: 45.75% |
Span: 636bp (75.4%) |
Frame: 1 |
| ribosomal |
| Match: gi|198427597|ref|XP_002131069.1| |
score: 177 |
e-value: 6e-44 |
Identity: 44.13% |
Span: 633bp (75.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|189239465|ref|XP_975230.2| |
score: 177 |
e-value: 1e-42 |
Identity: 44.05% |
Span: 678bp (80.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|18313178|ref|NP_559845.1| |
score: 176 |
e-value: 2e-42 |
Identity: 45.78% |
Span: 675bp (80.1%) |
Frame: 1 |
| gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum] gi|29336868|sp|Q8ZVM9|ECX1_PY... |
| Match: gi|72012895|ref|XP_785829.1| |
score: 176 |
e-value: 2e-42 |
Identity: 51.12% |
Span: 510bp (60.5%) |
Frame: 1 |
| PREDICTED: similar to LOC495942 protein [Strongylocentrotus purpuratus] >gi115926426|ref|XP_001179028.1| PREDICTED: s... |
| Match: gi|52550028|gb|AAU83877.1| |
score: 176 |
e-value: 2e-42 |
Identity: 46.86% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|52550028|gb|AAU83877.1| ribonuclease PH [uncultured archaeon GZfos34H10] |
| Match: gi|167044510|gb|ABZ09185.1| |
score: 176 |
e-value: 2e-42 |
Identity: 44.33% |
Span: 609bp (72.2%) |
Frame: 1 |
| putative |
| Match: gi|167044148|gb|ABZ08830.1| |
score: 175 |
e-value: 4e-42 |
Identity: 44.33% |
Span: 609bp (72.2%) |
Frame: 1 |
| putative |
| Match: gi|147919675|ref|YP_686581.1| |
score: 175 |
e-value: 4e-42 |
Identity: 47.2% |
Span: 642bp (76.2%) |
Frame: 1 |
| putative |
| Match: gi|145592134|ref|YP_001154136.1| |
score: 174 |
e-value: 8e-42 |
Identity: 44.44% |
Span: 675bp (80.1%) |
Frame: 1 |
| exosome |
| Match: gi|40217446|emb|CAE46379.1| |
score: 174 |
e-value: 6e-42 |
Identity: 45.41% |
Span: 621bp (73.7%) |
Frame: 1 |
| gi|40217446|emb|CAE46379.1| ribonuclease PH [uncultured archaeon] |
| Match: gi|73974732|ref|XP_857418.1| |
score: 174 |
e-value: 6e-42 |
Identity: 45.83% |
Span: 648bp (76.9%) |
Frame: 1 |
| gi|73974732|ref|XP_857418.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|148642302|ref|YP_001272815.1| |
score: 174 |
e-value: 8e-42 |
Identity: 44.44% |
Span: 621bp (73.7%) |
Frame: 1 |
| exosome |
| Match: gi|157133589|ref|XP_001656263.1| |
score: 172 |
e-value: 3e-43 |
Identity: 41.15% |
Span: 678bp (80.4%) |
Frame: 1 |
| exosome |
| Match: gi|197622768|gb|EDY35337.1| |
score: 172 |
e-value: 2e-41 |
Identity: 45.81% |
Span: 609bp (72.2%) |
Frame: 1 |
| exosome |
| Match: gi|170070082|ref|XP_001869459.1| |
score: 172 |
e-value: 4e-43 |
Identity: 41.28% |
Span: 654bp (77.6%) |
Frame: 1 |
| exosome |
| Match: gi|195996065|ref|XP_002107901.1| |
score: 171 |
e-value: 7e-45 |
Identity: 42.86% |
Span: 648bp (76.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|194761146|ref|XP_001962793.1| |
score: 171 |
e-value: 8e-43 |
Identity: 40.93% |
Span: 642bp (76.2%) |
Frame: 1 |
| GF15621 |
| Match: gi|195116638|ref|XP_002002859.1| |
score: 167 |
e-value: 5e-43 |
Identity: 41.67% |
Span: 645bp (76.5%) |
Frame: 1 |
| GI10716 |
| Match: gi|195031196|ref|XP_001988306.1| |
score: 166 |
e-value: 5e-42 |
Identity: 40.47% |
Span: 642bp (76.2%) |
Frame: 1 |
| GH10637 |
| Match: gi|195398184|ref|XP_002057704.1| |
score: 166 |
e-value: 7e-42 |
Identity: 41.67% |
Span: 645bp (76.5%) |
Frame: 1 |
| GJ18275 |
| Match: gi|118489833|gb|ABK96716.1| |
score: 40.8 |
e-value: 4e-101 |
Identity: 89.47% |
Span: 57bp (6.8%) |
Frame: 2 |
| unknown |
| Match: gi|147867252|emb|CAN81194.1| |
score: 38.9 |
e-value: 3e-102 |
Identity: 84.21% |
Span: 57bp (6.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|159474468|ref|XP_001695347.1| |
score: 37.4 |
e-value: 2e-68 |
Identity: 65.38% |
Span: 69bp (8.2%) |
Frame: 2 |
| 3'-5' exoribonuclease PH component of the exosome [Chlamydomonas reinhardtii] >gi158275830|gb|EDP01605.1| 3'-5' exori... |
| Match: gi|15233167|ref|NP_191721.1| |
score: 35.4 |
e-value: 2e-88 |
Identity: 100% |
Span: 45bp (5.3%) |
Frame: 2 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|195996065|ref|XP_002107901.1| |
score: 34.3 |
e-value: 7e-45 |
Identity: 68.42% |
Span: 57bp (6.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|168063069|ref|XP_001783497.1| |
score: 34.3 |
e-value: 2e-78 |
Identity: 77.78% |
Span: 54bp (6.4%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162664987|gb|EDQ51687.1| predicted protein [Physcomitrella... |
| Match: gi|66802544|ref|XP_635144.1| |
score: 32.7 |
e-value: 1e-51 |
Identity: 57.14% |
Span: 63bp (7.5%) |
Frame: 2 |
| gi|66802544|ref|XP_635144.1| hypothetical protein DDB0183823 [Dictyostelium discoideum] >gi|60463463|gb|EAL61648.1| h... |
| Match: gi|195116638|ref|XP_002002859.1| |
score: 32.3 |
e-value: 5e-43 |
Identity: 53.57% |
Span: 75bp (8.9%) |
Frame: 2 |
| GI10716 |
| Match: gi|195031196|ref|XP_001988306.1| |
score: 30.4 |
e-value: 5e-42 |
Identity: 51.85% |
Span: 72bp (8.5%) |
Frame: 2 |
| GH10637 |
| Match: gi|47848476|dbj|BAD22331.1| |
score: 30 |
e-value: 1e-70 |
Identity: 70% |
Span: 57bp (6.8%) |
Frame: 2 |
| putative exosome component 4 [Oryza sativa Japonica Group] >gi47848647|dbj|BAD22495.1| putative exosome component 4 [... |
| Match: gi|218201746|gb|EEC84173.1| |
score: 30 |
e-value: 1e-89 |
Identity: 70% |
Span: 57bp (6.8%) |
Frame: 2 |
| hypothetical protein OsI_30553 [Oryza sativa Indica Group] >gi222641142|gb|EEE69274.1| hypothetical protein OsJ_28540... |
| Match: gi|212721602|ref|NP_001131612.1| |
score: 30 |
e-value: 3e-90 |
Identity: 70% |
Span: 57bp (6.8%) |
Frame: 2 |
| RNase PH homolog [Zea mays] >gi194692034|gb|ACF80101.1| unknown [Zea mays] |
| Match: gi|195622232|gb|ACG32946.1| |
score: 30 |
e-value: 6e-90 |
Identity: 70% |
Span: 57bp (6.8%) |
Frame: 2 |
| exosome complex exonuclease RRP41 [Zea mays] |
| Match: gi|195398184|ref|XP_002057704.1| |
score: 29.3 |
e-value: 7e-42 |
Identity: 46.43% |
Span: 75bp (8.9%) |
Frame: 2 |
| GJ18275 |
| Match: gi|194761146|ref|XP_001962793.1| |
score: 28.1 |
e-value: 8e-43 |
Identity: 46.43% |
Span: 75bp (8.9%) |
Frame: 2 |
| GF15621 |
| Match: gi|156388129|ref|XP_001634554.1| |
score: 27.7 |
e-value: 2e-60 |
Identity: 52.63% |
Span: 57bp (6.8%) |
Frame: 2 |
| predicted protein [Nematostella vectensis] >gi156221638|gb|EDO42491.1| predicted protein [Nematostella vectensis] |
| Match: gi|170070082|ref|XP_001869459.1| |
score: 27.7 |
e-value: 4e-43 |
Identity: 53.85% |
Span: 69bp (8.2%) |
Frame: 2 |
| exosome |
| Match: gi|157133589|ref|XP_001656263.1| |
score: 27.7 |
e-value: 3e-43 |
Identity: 53.85% |
Span: 69bp (8.2%) |
Frame: 2 |
| exosome |
| Match: gi|215493342|gb|EEC02983.1| |
score: 26.2 |
e-value: 2e-50 |
Identity: 46.15% |
Span: 69bp (8.2%) |
Frame: 2 |
| exosomal |
| Match: gi|198427597|ref|XP_002131069.1| |
score: 25 |
e-value: 6e-44 |
Identity: 50% |
Span: 54bp (6.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|20093819|ref|NP_613666.1| |
score: 25 |
e-value: 6e-45 |
Identity: 56.25% |
Span: 48bp (5.7%) |
Frame: 2 |
| gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH [Methanopyrus kandleri AV19] gi|29336819|sp|Q8TYC1|E... |
| Match: gi|219436298|ref|XP_002215927.1| |
score: 23.5 |
e-value: 2e-50 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|219430577|ref|XP_002213076.1| |
score: 23.5 |
e-value: 1e-53 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|149430580|ref|XP_001515504.1| |
score: 22.7 |
e-value: 2e-50 |
Identity: 47.37% |
Span: 57bp (6.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|213514504|ref|NP_001134304.1| |
score: 22.3 |
e-value: 5e-55 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| Exosome complex exonuclease RRP41 [Salmo salar] >gi209732228|gb|ACI66983.1| Exosome complex exonuclease RRP41 [Salmo ... |
| Match: gi|197622768|gb|EDY35337.1| |
score: 22.3 |
e-value: 2e-41 |
Identity: 31.82% |
Span: 66bp (7.8%) |
Frame: 2 |
| exosome |
| Match: gi|41152247|ref|NP_957033.1| |
score: 22.3 |
e-value: 3e-53 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| putative exosome complex exonuclease RRP41 [Danio rerio] >gi37747963|gb|AAH59525.1| Exosc4 protein [Danio rerio] >gi|... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 21.9 |
e-value: 6e-53 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|198442889|ref|NP_001128332.1| |
score: 21.9 |
e-value: 2e-53 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| exosome |
| Match: gi|148697598|gb|EDL29545.1| |
score: 21.9 |
e-value: 6e-53 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| exosome |
| Match: gi|212506432|gb|EEB10650.1| |
score: 21.6 |
e-value: 2e-47 |
Identity: 50% |
Span: 48bp (5.7%) |
Frame: 2 |
| Exosome |
| Match: gi|47220383|emb|CAF98482.1| |
score: 21.6 |
e-value: 2e-45 |
Identity: 36.84% |
Span: 57bp (6.8%) |
Frame: 2 |
| gi|47220383|emb|CAF98482.1| unnamed protein product [Tetraodon nigroviridis] |
|
| 227 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At3G61620.1 |
score: 316 |
e-value: 1e-90 |
Identity: 76.65% |
Span: 678bp (80.4%) |
Frame: 1 |
| Symbols: RRP41 | RRP41 (Ribosomal RNA Processing 41); 3'-5'-exoribonuclease/ RNA binding | chr3:22812357-22813885 RE... |
| Match: At4G27490.1 |
score: 98.2 |
e-value: 5e-21 |
Identity: 30.69% |
Span: 606bp (71.9%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr4:13739967-13741653 FORWARD |
| Match: At3G46210.3 |
score: 77 |
e-value: 1e-14 |
Identity: 31.67% |
Span: 513bp (60.9%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.5 |
score: 77 |
e-value: 1e-14 |
Identity: 31.67% |
Span: 513bp (60.9%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.2 |
score: 77 |
e-value: 1e-14 |
Identity: 31.67% |
Span: 513bp (60.9%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.4 |
score: 77 |
e-value: 1e-14 |
Identity: 31.67% |
Span: 513bp (60.9%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.1 |
score: 77 |
e-value: 1e-14 |
Identity: 31.67% |
Span: 513bp (60.9%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:16987945-16989474 REVERSE |
| Match: At3G61620.1 |
score: 35.4 |
e-value: 1e-90 |
Identity: 100% |
Span: 45bp (5.3%) |
Frame: 2 |
| Symbols: RRP41 | RRP41 (Ribosomal RNA Processing 41); 3'-5'-exoribonuclease/ RNA binding | chr3:22812357-22813885 RE... |
|
| swissprot [blastx] | Showing best 100 hits recorded |
| Match: Q921I9 |
score: 211 |
e-value: 4e-54 |
Identity: 50% |
Span: 669bp (79.4%) |
Frame: 1 |
| Exosome complex exonuclease RRP41 OS=Mus musculus GN=Exosc4 PE=2 SV=3 |
| Match: Q9NPD3 |
score: 211 |
e-value: 4e-54 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| Exosome complex exonuclease RRP41 OS=Homo sapiens GN=EXOSC4 PE=1 SV=3 |
| Match: Q7YRA3 |
score: 211 |
e-value: 4e-54 |
Identity: 50.45% |
Span: 669bp (79.4%) |
Frame: 1 |
| Exosome complex exonuclease RRP41 OS=Bos taurus GN=EXOSC4 PE=2 SV=3 |
| Match: Q5JIR6 |
score: 188 |
e-value: 4e-47 |
Identity: 49.28% |
Span: 621bp (73.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus kodakaraensis GN=TK1634 PE=3 SV=1 |
| Match: O26779 |
score: 182 |
e-value: 2e-45 |
Identity: 43.67% |
Span: 687bp (81.5%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Methanobacterium thermoautotrophicum GN=MTH_683 PE=3 SV=1 |
| Match: Q9V119 |
score: 182 |
e-value: 3e-45 |
Identity: 48.31% |
Span: 621bp (73.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus abyssi GN=PYRAB06100 PE=1 SV=1 |
| Match: Q8U0L9 |
score: 181 |
e-value: 3e-45 |
Identity: 48.31% |
Span: 621bp (73.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus furiosus GN=PF1568 PE=3 SV=1 |
| Match: Q8TYC1 |
score: 181 |
e-value: 4e-46 |
Identity: 48.83% |
Span: 639bp (75.8%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Methanopyrus kandleri GN=MK0381 PE=3 SV=1 |
| Match: O59223 |
score: 180 |
e-value: 7e-45 |
Identity: 47.34% |
Span: 621bp (73.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus horikoshii GN=PH1549 PE=3 SV=1 |
| Match: Q8ZVM9 |
score: 176 |
e-value: 1e-43 |
Identity: 45.78% |
Span: 675bp (80.1%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrobaculum aerophilum GN=PAE2207 PE=3 SV=1 |
| Match: Q9UXC2 |
score: 171 |
e-value: 6e-42 |
Identity: 44.33% |
Span: 609bp (72.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus solfataricus GN=SSO0735 PE=1 SV=1 |
| Match: Q4JB27 |
score: 170 |
e-value: 8e-42 |
Identity: 46.31% |
Span: 609bp (72.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus acidocaldarius GN=Saci_0610 PE=3 SV=1 |
| Match: Q975G8 |
score: 169 |
e-value: 5e-42 |
Identity: 45.32% |
Span: 609bp (72.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus tokodaii GN=ST0443 PE=3 SV=1 |
| Match: Q97BZ5 |
score: 167 |
e-value: 9e-41 |
Identity: 43.58% |
Span: 654bp (77.6%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermoplasma volcanium GN=TV0310 PE=3 SV=1 |
| Match: Q8PTT8 |
score: 166 |
e-value: 1e-40 |
Identity: 43.84% |
Span: 657bp (77.9%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Methanosarcina mazei GN=MM_2623 PE=3 SV=1 |
| Match: Q9HIP2 |
score: 162 |
e-value: 2e-39 |
Identity: 41.74% |
Span: 654bp (77.6%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermoplasma acidophilum GN=Ta1293 PE=3 SV=1 |
| Match: O29757 |
score: 156 |
e-value: 1e-37 |
Identity: 44.17% |
Span: 609bp (72.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Archaeoglobus fulgidus GN=AF_0493 PE=1 SV=1 |
| Match: Q9YC03 |
score: 153 |
e-value: 1e-36 |
Identity: 42.08% |
Span: 606bp (71.9%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Aeropyrum pernix GN=APE_1447 PE=3 SV=1 |
| Match: Q17533 |
score: 143 |
e-value: 9e-35 |
Identity: 39.9% |
Span: 609bp (72.2%) |
Frame: 1 |
| Putative exosome complex exonuclease RRP41 OS=Caenorhabditis elegans GN=exos-4.1 PE=2 SV=2 |
| Match: O42872 |
score: 143 |
e-value: 1e-33 |
Identity: 40% |
Span: 660bp (78.3%) |
Frame: 1 |
| Exosome complex component ski6 OS=Schizosaccharomyces pombe GN=ski6 PE=2 SV=1 |
| Match: P46948 |
score: 126 |
e-value: 1e-28 |
Identity: 36.89% |
Span: 615bp (73.0%) |
Frame: 1 |
| Exosome complex component SKI6 OS=Saccharomyces cerevisiae GN=SKI6 PE=1 SV=1 |
| Match: Q6P0I8 |
score: 116 |
e-value: 1e-25 |
Identity: 32.85% |
Span: 597bp (70.8%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Danio rerio GN=exosc6 PE=2 SV=2 |
| Match: Q8BTW3 |
score: 96.7 |
e-value: 1e-19 |
Identity: 29.66% |
Span: 663bp (78.6%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Mus musculus GN=Exosc6 PE=2 SV=1 |
| Match: Q5RKV6 |
score: 89.7 |
e-value: 2e-17 |
Identity: 29% |
Span: 648bp (76.9%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Homo sapiens GN=EXOSC6 PE=1 SV=1 |
| Match: Q28F19 |
score: 88.2 |
e-value: 5e-17 |
Identity: 30.92% |
Span: 597bp (70.8%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Xenopus tropicalis GN=exosc6 PE=2 SV=1 |
| Match: Q9NQT4 |
score: 84 |
e-value: 1e-15 |
Identity: 30.09% |
Span: 645bp (76.5%) |
Frame: 1 |
| Exosome complex exonuclease RRP46 OS=Homo sapiens GN=EXOSC5 PE=1 SV=1 |
| Match: Q9CRA8 |
score: 80.5 |
e-value: 1e-14 |
Identity: 29.63% |
Span: 645bp (76.5%) |
Frame: 1 |
| Exosome complex exonuclease RRP46 OS=Mus musculus GN=Exosc5 PE=1 SV=1 |
| Match: Q9P7R3 |
score: 79.7 |
e-value: 2e-14 |
Identity: 32.78% |
Span: 522bp (61.9%) |
Frame: 1 |
| Putative exosome complex exonuclease C211.08c OS=Schizosaccharomyces pombe GN=SPBC211.08c |
| Match: Q02E28 |
score: 76.6 |
e-value: 2e-13 |
Identity: 33.7% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rph |
| Match: A6VEE1 |
score: 76.6 |
e-value: 2e-13 |
Identity: 33.7% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas aeruginosa (strain PA7) GN=rph |
| Match: P50597 |
score: 76.6 |
e-value: 2e-13 |
Identity: 33.7% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas aeruginosa GN=rph |
| Match: Q9JTN2 |
score: 75.1 |
e-value: 4e-13 |
Identity: 31.44% |
Span: 633bp (75.1%) |
Frame: 1 |
| Ribonuclease PH OS=Neisseria meningitidis serogroup A GN=rph |
| Match: A1KUT9 |
score: 75.1 |
e-value: 4e-13 |
Identity: 31.44% |
Span: 633bp (75.1%) |
Frame: 1 |
| Ribonuclease PH OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rph |
| Match: A9M0T5 |
score: 75.1 |
e-value: 4e-13 |
Identity: 31.44% |
Span: 633bp (75.1%) |
Frame: 1 |
| Ribonuclease PH OS=Neisseria meningitidis serogroup C (strain 053442) GN=rph |
| Match: Q9JYN5 |
score: 75.1 |
e-value: 4e-13 |
Identity: 31% |
Span: 633bp (75.1%) |
Frame: 1 |
| Ribonuclease PH OS=Neisseria meningitidis serogroup B GN=rph |
| Match: Q83HF6 |
score: 73.9 |
e-value: 1e-12 |
Identity: 29.82% |
Span: 627bp (74.4%) |
Frame: 1 |
| Ribonuclease PH OS=Tropheryma whipplei (strain TW08/27) GN=rph |
| Match: Q83FT1 |
score: 73.9 |
e-value: 1e-12 |
Identity: 29.82% |
Span: 627bp (74.4%) |
Frame: 1 |
| Ribonuclease PH OS=Tropheryma whipplei (strain Twist) GN=rph |
| Match: A1T097 |
score: 73.6 |
e-value: 1e-12 |
Identity: 31.35% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Psychromonas ingrahamii (strain 37) GN=rph |
| Match: Q88BE0 |
score: 72.8 |
e-value: 2e-12 |
Identity: 32.07% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas syringae pv. tomato GN=rph |
| Match: Q4ZZY6 |
score: 72.8 |
e-value: 2e-12 |
Identity: 32.07% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rph |
| Match: A5G3S1 |
score: 72.8 |
e-value: 2e-12 |
Identity: 29.55% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Geobacter uraniireducens (strain Rf4) GN=rph |
| Match: A6VLF1 |
score: 72.4 |
e-value: 3e-12 |
Identity: 28.57% |
Span: 621bp (73.7%) |
Frame: 1 |
| Ribonuclease PH OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rph |
| Match: A4Y0L7 |
score: 72.4 |
e-value: 3e-12 |
Identity: 30.94% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas mendocina (strain ymp) GN=rph |
| Match: Q5QYL5 |
score: 71.6 |
e-value: 5e-12 |
Identity: 31.49% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Idiomarina loihiensis GN=rph |
| Match: Q4K3R6 |
score: 71.2 |
e-value: 6e-12 |
Identity: 31.52% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rph |
| Match: A5N2V9 |
score: 70.9 |
e-value: 8e-12 |
Identity: 28.32% |
Span: 615bp (73.0%) |
Frame: 1 |
| Ribonuclease PH OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rph |
| Match: Q7MBD4 |
score: 70.5 |
e-value: 1e-11 |
Identity: 35% |
Span: 495bp (58.7%) |
Frame: 1 |
| Ribonuclease PH OS=Chromobacterium violaceum GN=rph |
| Match: A5EV74 |
score: 70.5 |
e-value: 1e-11 |
Identity: 31.49% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Dichelobacter nodosus (strain VCS1703A) GN=rph |
| Match: Q9CJW5 |
score: 70.5 |
e-value: 1e-11 |
Identity: 28.64% |
Span: 609bp (72.2%) |
Frame: 1 |
| Ribonuclease PH OS=Pasteurella multocida GN=rph |
| Match: Q6MJR9 |
score: 70.5 |
e-value: 1e-11 |
Identity: 31.62% |
Span: 651bp (77.2%) |
Frame: 1 |
| Ribonuclease PH OS=Bdellovibrio bacteriovorus GN=rph |
| Match: Q5E8P0 |
score: 70.5 |
e-value: 1e-11 |
Identity: 30.94% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rph |
| Match: Q88C89 |
score: 70.5 |
e-value: 1e-11 |
Identity: 32.98% |
Span: 510bp (60.5%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas putida (strain KT2440) GN=rph |
| Match: A5WB10 |
score: 70.5 |
e-value: 1e-11 |
Identity: 32.98% |
Span: 510bp (60.5%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rph |
| Match: Q3K4M0 |
score: 70.1 |
e-value: 1e-11 |
Identity: 30.77% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas fluorescens (strain PfO-1) GN=rph |
| Match: Q0VT66 |
score: 70.1 |
e-value: 1e-11 |
Identity: 32.43% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rph |
| Match: A8GLF0 |
score: 70.1 |
e-value: 1e-11 |
Identity: 32.6% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Serratia proteamaculans (strain 568) GN=rph |
| Match: Q6NFN6 |
score: 69.7 |
e-value: 2e-11 |
Identity: 29.15% |
Span: 615bp (73.0%) |
Frame: 1 |
| Ribonuclease PH OS=Corynebacterium diphtheriae GN=rph |
| Match: Q7MPT3 |
score: 69.7 |
e-value: 2e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Vibrio vulnificus (strain YJ016) GN=rph |
| Match: Q87T93 |
score: 69.7 |
e-value: 2e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Vibrio parahaemolyticus GN=rph |
| Match: Q8DDX4 |
score: 69.7 |
e-value: 2e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Vibrio vulnificus GN=rph |
| Match: B0TQK4 |
score: 69.3 |
e-value: 2e-11 |
Identity: 31.72% |
Span: 513bp (60.9%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella halifaxensis (strain HAW-EB4) GN=rph |
| Match: A8H9B7 |
score: 69.3 |
e-value: 2e-11 |
Identity: 31.72% |
Span: 513bp (60.9%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rph |
| Match: Q5F840 |
score: 69.3 |
e-value: 2e-11 |
Identity: 31.08% |
Span: 612bp (72.6%) |
Frame: 1 |
| Ribonuclease PH OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rph |
| Match: A4VGR8 |
score: 69.3 |
e-value: 2e-11 |
Identity: 30.11% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Pseudomonas stutzeri (strain A1501) GN=rph |
| Match: Q8E9L4 |
score: 68.9 |
e-value: 3e-11 |
Identity: 30% |
Span: 585bp (69.4%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella oneidensis GN=rph |
| Match: Q9KVD6 |
score: 68.9 |
e-value: 3e-11 |
Identity: 29.73% |
Span: 609bp (72.2%) |
Frame: 1 |
| Ribonuclease PH OS=Vibrio cholerae GN=rph |
| Match: A0Q4X5 |
score: 68.9 |
e-value: 3e-11 |
Identity: 31.72% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. novicida (strain U112) GN=rph |
| Match: A7FCS9 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rph |
| Match: Q1CCZ7 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rph |
| Match: Q1C262 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rph |
| Match: A4TSE2 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pestis (strain Pestoides F) GN=rph |
| Match: Q0HE49 |
score: 68.6 |
e-value: 4e-11 |
Identity: 30.81% |
Span: 549bp (65.1%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella sp. (strain MR-4) GN=rph |
| Match: Q8ZJP8 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pestis GN=rph |
| Match: Q9S2H7 |
score: 68.6 |
e-value: 4e-11 |
Identity: 31.69% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Streptomyces coelicolor GN=rph |
| Match: A1JHW7 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rph |
| Match: A0L1S6 |
score: 68.6 |
e-value: 4e-11 |
Identity: 30.81% |
Span: 549bp (65.1%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella sp. (strain ANA-3) GN=rph |
| Match: Q0HZV0 |
score: 68.6 |
e-value: 4e-11 |
Identity: 30.81% |
Span: 549bp (65.1%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella sp. (strain MR-7) GN=rph |
| Match: Q66GE1 |
score: 68.6 |
e-value: 4e-11 |
Identity: 32.04% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Yersinia pseudotuberculosis GN=rph |
| Match: Q8G7I0 |
score: 68.6 |
e-value: 4e-11 |
Identity: 31.72% |
Span: 504bp (59.8%) |
Frame: 1 |
| Ribonuclease PH OS=Bifidobacterium longum GN=rph |
| Match: Q2JEN8 |
score: 68.6 |
e-value: 4e-11 |
Identity: 31.46% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Frankia sp. (strain CcI3) GN=rph |
| Match: Q2A562 |
score: 68.2 |
e-value: 5e-11 |
Identity: 32.26% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rph |
| Match: Q0BNH8 |
score: 68.2 |
e-value: 5e-11 |
Identity: 32.26% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rph |
| Match: Q0AZR6 |
score: 68.2 |
e-value: 5e-11 |
Identity: 31.49% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rph |
| Match: Q6A759 |
score: 68.2 |
e-value: 5e-11 |
Identity: 29.86% |
Span: 612bp (72.6%) |
Frame: 1 |
| Ribonuclease PH OS=Propionibacterium acnes GN=rph |
| Match: A7NA52 |
score: 68.2 |
e-value: 5e-11 |
Identity: 32.26% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. holarctica (strain FTA) GN=rph |
| Match: Q07WF3 |
score: 68.2 |
e-value: 5e-11 |
Identity: 29.72% |
Span: 591bp (70.1%) |
Frame: 1 |
| Ribonuclease PH OS=Shewanella frigidimarina (strain NCIMB 400) GN=rph |
| Match: Q98DN6 |
score: 67.8 |
e-value: 7e-11 |
Identity: 29.07% |
Span: 627bp (74.4%) |
Frame: 1 |
| Ribonuclease PH OS=Rhizobium loti GN=rph |
| Match: Q0AJ79 |
score: 67.8 |
e-value: 7e-11 |
Identity: 29.28% |
Span: 594bp (70.5%) |
Frame: 1 |
| Ribonuclease PH OS=Nitrosomonas eutropha (strain C91) GN=rph |
| Match: O42894 |
score: 67.8 |
e-value: 7e-11 |
Identity: 26.89% |
Span: 615bp (73.0%) |
Frame: 1 |
| Exosome complex component rrp46 OS=Schizosaccharomyces pombe GN=rrp46 PE=2 SV=1 |
| Match: Q82D17 |
score: 67.8 |
e-value: 7e-11 |
Identity: 31.05% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Streptomyces avermitilis GN=rph |
| Match: Q1B585 |
score: 67.4 |
e-value: 9e-11 |
Identity: 28.51% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Mycobacterium sp. (strain MCS) GN=rph |
| Match: Q14HY4 |
score: 67.4 |
e-value: 9e-11 |
Identity: 31.18% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rph |
| Match: Q5NGI2 |
score: 67.4 |
e-value: 9e-11 |
Identity: 31.18% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. tularensis GN=rph |
| Match: A4IYU1 |
score: 67.4 |
e-value: 9e-11 |
Identity: 31.18% |
Span: 498bp (59.1%) |
Frame: 1 |
| Ribonuclease PH OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rph |
| Match: A1UJV2 |
score: 67.4 |
e-value: 9e-11 |
Identity: 28.51% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Mycobacterium sp. (strain KMS) GN=rph |
| Match: A3Q379 |
score: 67.4 |
e-value: 9e-11 |
Identity: 28.51% |
Span: 600bp (71.2%) |
Frame: 1 |
| Ribonuclease PH OS=Mycobacterium sp. (strain JLS) GN=rph |
| Match: Q17533 |
score: 25 |
e-value: 9e-35 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| Putative exosome complex exonuclease RRP41 OS=Caenorhabditis elegans GN=exos-4.1 PE=2 SV=2 |
| Match: Q8TYC1 |
score: 25 |
e-value: 4e-46 |
Identity: 56.25% |
Span: 48bp (5.7%) |
Frame: 2 |
| Probable exosome complex exonuclease 1 OS=Methanopyrus kandleri GN=MK0381 PE=3 SV=1 |
| Match: Q975G8 |
score: 23.5 |
e-value: 5e-42 |
Identity: 50% |
Span: 60bp (7.1%) |
Frame: 2 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus tokodaii GN=ST0443 PE=3 SV=1 |
| Match: Q921I9 |
score: 21.9 |
e-value: 4e-54 |
Identity: 42.11% |
Span: 57bp (6.8%) |
Frame: 2 |
| Exosome complex exonuclease RRP41 OS=Mus musculus GN=Exosc4 PE=2 SV=3 |
|
| 4 lower scoring hits censored -- only 100 best hits are stored. |
